RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 RIPK1Q13546 671 aa14.08□□□□□ -0.16
UPK3BP1-201ENST00000428678 PLGLAQ15195 96 aa14.08□□□□□ -0.16
UPK3BP1-201ENST00000428678 LRRC36Q1X8D7 754 aa14.08□□□□□ -0.16
UPK3BP1-201ENST00000428678 XAF1Q6GPH4 301 aa14.08□□□□□ -0.16
UPK3BP1-201ENST00000428678 ODF3L1Q8IXM7 274 aa14.08□□□□□ -0.16
UPK3BP1-201ENST00000428678 Q8N1Y9 231 aa14.08□□□□□ -0.16
UPK3BP1-201ENST00000428678 FLYWCH2Q96CP2 140 aaKnown RBP14.08□□□□□ -0.16
UPK3BP1-201ENST00000428678 Q96MT0 163 aa14.08□□□□□ -0.16
UPK3BP1-201ENST00000428678 ELOVL1Q9BW60 279 aa14.08□□□□□ -0.16
UPK3BP1-201ENST00000428678 C19orf73Q9NVV2 129 aa14.08□□□□□ -0.16
UPK3BP1-201ENST00000428678 KCNIP1Q9NZI2 227 aa14.08□□□□□ -0.16
UPK3BP1-201ENST00000428678 STUB1Q9UNE7 303 aa14.08□□□□□ -0.16
UPK3BP1-201ENST00000428678 HYDINQ4G0P3 5121 aa14.08□□□□□ -0.16
UPK3BP1-201ENST00000428678 NDUFA3O95167 84 aa14.07□□□□□ -0.16
UPK3BP1-201ENST00000428678 HSPB1P04792 205 aaKnown RBP14.07□□□□□ -0.16
UPK3BP1-201ENST00000428678 CRIP2P52943 208 aaPredicted RBP14.07□□□□□ -0.16
UPK3BP1-201ENST00000428678 CX3CL1P78423 397 aa14.07□□□□□ -0.16
UPK3BP1-201ENST00000428678 ZNF660Q6AZW8 331 aaPredicted RBP14.07□□□□□ -0.16
UPK3BP1-201ENST00000428678 RPL22L1Q6P5R6 122 aaKnown RBP14.07□□□□□ -0.16
UPK3BP1-201ENST00000428678 C5orf24Q7Z6I8 188 aa14.07□□□□□ -0.16
UPK3BP1-201ENST00000428678 ANKRD13BQ86YJ7 626 aa14.07□□□□□ -0.16
UPK3BP1-201ENST00000428678 GAPTQ8N292 157 aa14.07□□□□□ -0.16
UPK3BP1-201ENST00000428678 TCTEX1D1Q8N7M0 179 aa14.07□□□□□ -0.16
UPK3BP1-201ENST00000428678 MUL1Q969V5 352 aa14.07□□□□□ -0.16
UPK3BP1-201ENST00000428678 MRPS24Q96EL2 167 aaKnown RBP14.07□□□□□ -0.16
UPK3BP1-201ENST00000428678 SPATA25Q9BR10 227 aa14.07□□□□□ -0.16
UPK3BP1-201ENST00000428678 FBXL15Q9H469 300 aa14.07□□□□□ -0.16
UPK3BP1-201ENST00000428678 JPT1Q9UK76 154 aa14.07□□□□□ -0.16
UPK3BP1-201ENST00000428678 UBE2QL1A1L167 161 aa14.06□□□□□ -0.16
UPK3BP1-201ENST00000428678 LIMS3P0CW19 117 aa14.06□□□□□ -0.16
UPK3BP1-201ENST00000428678 LIMS4P0CW20 117 aa14.06□□□□□ -0.16
UPK3BP1-201ENST00000428678 ARSBP15848 533 aa14.06□□□□□ -0.16
UPK3BP1-201ENST00000428678 ALDH3A2P51648 485 aa14.06□□□□□ -0.16
UPK3BP1-201ENST00000428678 TPPP2P59282 170 aa14.06□□□□□ -0.16
UPK3BP1-201ENST00000428678 TMEM267Q0VDI3 215 aaPredicted RBP14.06□□□□□ -0.16
UPK3BP1-201ENST00000428678 CCDC58Q4VC31 144 aa14.06□□□□□ -0.16
UPK3BP1-201ENST00000428678 PYHIN1Q6K0P9 492 aa14.06□□□□□ -0.16
UPK3BP1-201ENST00000428678 GLIPR1L1Q6UWM5 242 aa14.06□□□□□ -0.16
UPK3BP1-201ENST00000428678 FAM131AQ6UXB0 335 aa14.06□□□□□ -0.16
UPK3BP1-201ENST00000428678 ZNF833PQ6ZTB9 187 aa14.06□□□□□ -0.16
UPK3BP1-201ENST00000428678 OR13C5Q8NGS8 318 aa14.06□□□□□ -0.16
UPK3BP1-201ENST00000428678 MS4A10Q96PG2 267 aa14.06□□□□□ -0.16
UPK3BP1-201ENST00000428678 BANF2Q9H503 90 aa14.06□□□□□ -0.16
UPK3BP1-201ENST00000428678 SAA2-SAA4A0A096LPE2 208 aa14.05□□□□□ -0.16
UPK3BP1-201ENST00000428678 A8MZ25 164 aa14.05□□□□□ -0.16
UPK3BP1-201ENST00000428678 RRHO14718 337 aa14.05□□□□□ -0.16
UPK3BP1-201ENST00000428678 CA11O75493 328 aa14.05□□□□□ -0.16
UPK3BP1-201ENST00000428678 JTBO76095 146 aa14.05□□□□□ -0.16
UPK3BP1-201ENST00000428678 RGS11O94810 467 aa14.05□□□□□ -0.16
UPK3BP1-201ENST00000428678 IGLV1-51P01701 117 aa14.05□□□□□ -0.16
UPK3BP1-201ENST00000428678 MAS1P04201 325 aa14.05□□□□□ -0.16
UPK3BP1-201ENST00000428678 SAA2P0DJI9 122 aaPredicted RBP14.05□□□□□ -0.16
UPK3BP1-201ENST00000428678 IGFBP3P17936 291 aaPredicted RBP14.05□□□□□ -0.16
UPK3BP1-201ENST00000428678 ACTBL2Q562R1 376 aa14.05□□□□□ -0.16
UPK3BP1-201ENST00000428678 JAGN1Q8N5M9 183 aa14.05□□□□□ -0.16
UPK3BP1-201ENST00000428678 OR2AK2Q8NG84 335 aa14.05□□□□□ -0.16
UPK3BP1-201ENST00000428678 RHOXF1Q8NHV9 184 aa14.05□□□□□ -0.16
UPK3BP1-201ENST00000428678 PYDC1Q8WXC3 89 aa14.05□□□□□ -0.16
UPK3BP1-201ENST00000428678 CYYR1Q96J86 154 aa14.05□□□□□ -0.16
UPK3BP1-201ENST00000428678 SELENOIQ9C0D9 397 aa14.05□□□□□ -0.16
UPK3BP1-201ENST00000428678 MBNL3Q9NUK0 354 aaKnown RBP14.05□□□□□ -0.16
UPK3BP1-201ENST00000428678 CKLFQ9UBR5 152 aa14.05□□□□□ -0.16
UPK3BP1-201ENST00000428678 RNF150Q9ULK6 438 aa14.05□□□□□ -0.16
UPK3BP1-201ENST00000428678 RPL36Q9Y3U8 105 aaKnown RBP14.05□□□□□ -0.16
UPK3BP1-201ENST00000428678 NUBP2Q9Y5Y2 271 aa14.05□□□□□ -0.16
UPK3BP1-201ENST00000428678 SC5DO75845 299 aa14.04□□□□□ -0.16
UPK3BP1-201ENST00000428678 IFNA6P05013 189 aa14.04□□□□□ -0.16
UPK3BP1-201ENST00000428678 EGR2P11161 476 aaPredicted RBP14.04□□□□□ -0.16
UPK3BP1-201ENST00000428678 FUT3P21217 361 aa14.04□□□□□ -0.16
UPK3BP1-201ENST00000428678 HTD2P86397 168 aa14.04□□□□□ -0.16
UPK3BP1-201ENST00000428678 UNQ5815/PRO19632Q6UWF5 114 aa14.04□□□□□ -0.16
UPK3BP1-201ENST00000428678 PPP1R27Q86WC6 154 aa14.04□□□□□ -0.16
UPK3BP1-201ENST00000428678 FAM103A1Q9BTL3 118 aaKnown RBP14.04□□□□□ -0.16
UPK3BP1-201ENST00000428678 NKX1-2Q9UD57 310 aaPredicted RBP14.04□□□□□ -0.16
UPK3BP1-201ENST00000428678 TRAV8-7A0A075B6U6 113 aa14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 FCN1O00602 326 aa14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 ARPC1BO15143 372 aaKnown RBP14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 YPEL1O60688 119 aa14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 CRTAPO75718 401 aaPredicted RBP14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 CIB2O75838 187 aa14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 MGMTP16455 207 aa14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 CD40LGP29965 261 aa14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 ETV1P50549 477 aa14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 RASSF2P50749 326 aa14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 HAGHQ16775 308 aa14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 OR2G6Q5TZ20 316 aa14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 AWAT2Q6E213 333 aa14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 CD200R1LQ6Q8B3 271 aa14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 TMPRSS11AQ6ZMR5 421 aa14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 ZNF554Q86TJ5 538 aa14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 CBR4Q8N4T8 237 aa14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 MRPL30Q8TCC3 161 aaKnown RBP14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 SMIM19Q96E16 107 aa14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 RHOVQ96L33 236 aa14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 YPEL2Q96QA6 119 aa14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 MRPS18AQ9NVS2 196 aaKnown RBP14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 CNOT2Q9NZN8 540 aaKnown RBP14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 GAB2Q9UQC2 676 aa14.03□□□□□ -0.16
UPK3BP1-201ENST00000428678 FAM90A7PA6NKC0 464 aa14.02□□□□□ -0.17
UPK3BP1-201ENST00000428678 FAM90A23PA8MXZ1 464 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms