RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 CLINT1Q14677 625 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 IZUMO4Q1ZYL8 232 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 ZNF585BQ52M93 769 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 Q6ZRG5 221 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 MRGPRGQ86SM5 289 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 FAM90A1Q86YD7 464 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 GCSAMQ8N6F7 178 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 TMEM252Q8N6L7 170 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 ITLN1Q8WWA0 313 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 LURAP1Q96LR2 239 aa11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 MRPL37Q9BZE1 423 aaKnown RBP11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 FAM212BQ9NTI7 297 aaPredicted RBP11.72□□□□□ -0.53
APOBEC3D-202ENST00000427494 IGKV1D-17A0A075B6S4 117 aa11.71□□□□□ -0.53
APOBEC3D-202ENST00000427494 MEX3AA1L020 520 aaKnown RBP11.71□□□□□ -0.53
APOBEC3D-202ENST00000427494 TMEM218A2RU14 115 aa11.71□□□□□ -0.53
APOBEC3D-202ENST00000427494 K7ENP7 123 aa11.71□□□□□ -0.53
APOBEC3D-202ENST00000427494 ABCD4O14678 606 aa11.71□□□□□ -0.53
APOBEC3D-202ENST00000427494 TMEM50AO95807 157 aa11.71□□□□□ -0.53
APOBEC3D-202ENST00000427494 IGKV1-5P01602 117 aa11.71□□□□□ -0.53
APOBEC3D-202ENST00000427494 SPP1P10451 314 aa11.71□□□□□ -0.53
APOBEC3D-202ENST00000427494 SELENOVP59797 346 aa11.71□□□□□ -0.53
APOBEC3D-202ENST00000427494 DEFA5Q01523 94 aa11.71□□□□□ -0.53
APOBEC3D-202ENST00000427494 BTN1A1Q13410 526 aa11.71□□□□□ -0.53
APOBEC3D-202ENST00000427494 ZNF808Q8N4W9 903 aaPredicted RBP11.71□□□□□ -0.53
APOBEC3D-202ENST00000427494 HSD17B11Q8NBQ5 300 aa11.71□□□□□ -0.53
APOBEC3D-202ENST00000427494 SH3BGRL3Q9H299 93 aa11.71□□□□□ -0.53
APOBEC3D-202ENST00000427494 TMEM231Q9H6L2 316 aa11.71□□□□□ -0.53
APOBEC3D-202ENST00000427494 TREM1Q9NP99 234 aa11.71□□□□□ -0.53
APOBEC3D-202ENST00000427494 PARP11Q9NR21 331 aa11.71□□□□□ -0.53
APOBEC3D-202ENST00000427494 CACNG5Q9UF02 275 aa11.71□□□□□ -0.53
APOBEC3D-202ENST00000427494 RNF115Q9Y4L5 304 aa11.71□□□□□ -0.53
APOBEC3D-202ENST00000427494 IGHV3-43A0A0B4J1X8 118 aa11.7□□□□□ -0.54
APOBEC3D-202ENST00000427494 ZNF737O75373 536 aa11.7□□□□□ -0.54
APOBEC3D-202ENST00000427494 IGHV3-43DP0DP04 118 aa11.7□□□□□ -0.54
APOBEC3D-202ENST00000427494 CFHR2P36980 270 aa11.7□□□□□ -0.54
APOBEC3D-202ENST00000427494 ID4P47928 161 aa11.7□□□□□ -0.54
APOBEC3D-202ENST00000427494 ARHGDIBP52566 201 aa11.7□□□□□ -0.54
APOBEC3D-202ENST00000427494 TRAT1Q6PIZ9 186 aa11.7□□□□□ -0.54
APOBEC3D-202ENST00000427494 BTNL8Q6UX41 500 aa11.7□□□□□ -0.54
APOBEC3D-202ENST00000427494 Q6ZRM9 215 aa11.7□□□□□ -0.54
APOBEC3D-202ENST00000427494 ZBTB34Q8NCN2 500 aa11.7□□□□□ -0.54
APOBEC3D-202ENST00000427494 RFESDQ8TAC1 157 aa11.7□□□□□ -0.54
APOBEC3D-202ENST00000427494 LRRC46Q96FV0 321 aa11.7□□□□□ -0.54
APOBEC3D-202ENST00000427494 C5orf30Q96GV9 206 aa11.7□□□□□ -0.54
APOBEC3D-202ENST00000427494 DCTN5Q9BTE1 182 aa11.7□□□□□ -0.54
APOBEC3D-202ENST00000427494 TOLLIPQ9H0E2 274 aa11.7□□□□□ -0.54
APOBEC3D-202ENST00000427494 SPINT2O43291 252 aa11.7□□□□□ -0.54
APOBEC3D-202ENST00000427494 CST7O76096 145 aa11.7□□□□□ -0.54
APOBEC3D-202ENST00000427494 F2RL1P55085 397 aa11.7□□□□□ -0.54
APOBEC3D-202ENST00000427494 PAX5Q02548 391 aa11.7□□□□□ -0.54
APOBEC3D-202ENST00000427494 ZNF266Q14584 549 aa11.7□□□□□ -0.54
APOBEC3D-202ENST00000427494 PRR30Q53SZ7 412 aaPredicted RBP11.7□□□□□ -0.54
APOBEC3D-202ENST00000427494 C1QTNF12Q5T7M4 302 aa11.7□□□□□ -0.54
APOBEC3D-202ENST00000427494 C16orf97H3BN30 126 aa11.69□□□□□ -0.54
APOBEC3D-202ENST00000427494 DANCRP0C864 163 aa11.69□□□□□ -0.54
APOBEC3D-202ENST00000427494 DYNLT3P51808 116 aa11.69□□□□□ -0.54
APOBEC3D-202ENST00000427494 PAX9P55771 341 aa11.69□□□□□ -0.54
APOBEC3D-202ENST00000427494 BAXQ07812 192 aa11.69□□□□□ -0.54
APOBEC3D-202ENST00000427494 ATRAIDQ6UW56 229 aa11.69□□□□□ -0.54
APOBEC3D-202ENST00000427494 ODF3L1Q8IXM7 274 aa11.69□□□□□ -0.54
APOBEC3D-202ENST00000427494 OR5C1Q8NGR4 320 aa11.69□□□□□ -0.54
APOBEC3D-202ENST00000427494 PPP1R35Q8TAP8 253 aa11.69□□□□□ -0.54
APOBEC3D-202ENST00000427494 SNX22Q96L94 193 aa11.69□□□□□ -0.54
APOBEC3D-202ENST00000427494 ELOVL5Q9NYP7 299 aa11.69□□□□□ -0.54
APOBEC3D-202ENST00000427494 ANKRD11Q6UB99 2663 aaPredicted RBP11.69□□□□□ -0.54
APOBEC3D-202ENST00000427494 ODAMA1E959 279 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 KIAA1324LA8MWY0 1029 aaPredicted RBP11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 C15orf65H3BRN8 121 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 AGPAT2O15120 278 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 MUC1P15941 1255 aaPredicted RBP11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 CD80P33681 288 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 RPL23AP62750 156 aaKnown RBP11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 TNFAIP6P98066 277 aaPredicted RBP11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 EIF4EBP1Q13541 118 aaPredicted RBP11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 LTC4SQ16873 150 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 OR2B11Q5JQS5 317 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 BTNL3Q6UXE8 466 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 TMEM108Q6UXF1 575 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 WFDC8Q8IUA0 241 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 TMEM217Q8N7C4 229 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 SNRNP40Q96DI7 357 aaKnown RBP11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 RAB40CQ96S21 281 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 SEBOXQ9HB31 216 aaPredicted RBP11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 FAM96BQ9Y3D0 163 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 CUL9Q8IWT3 2517 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 LAMA5O15230 3695 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 DEFB108AA8MXU0 73 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 MGST3O14880 152 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 LHBP01229 141 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 IGHV1-46P01743 117 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 PRH1P02810 166 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 ADCYAP1P18509 176 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 CAMLGP49069 296 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 RPL30P62888 115 aaKnown RBP11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 CATR1Q13166 79 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 TMEM182Q6ZP80 229 aaPredicted RBP11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 NUP37Q8NFH4 326 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 TCTEX1D2Q8WW35 142 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 ZNF835Q9Y2P0 537 aa11.68□□□□□ -0.54
APOBEC3D-202ENST00000427494 CADP27708 2225 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms