RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 FABP4P15090 132 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 S100PP25815 95 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 S100A2P29034 98 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 ZNF585BQ52M93 769 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 OR5A2Q8NGI9 324 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 OR4C12Q96R67 309 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 TCEAL7Q9BRU2 100 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 UNKLQ9H9P5 680 aaKnown RBP12.17□□□□□ -0.46
ERCC3-202ENST00000426778 TECTAO75443 2155 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 CLEC18AA5D8T8 446 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 OR2H2O95918 312 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 IGKV1D-33P01593 117 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 IGKV1-33P01594 117 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 PGA5P0DJD9 388 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 APLNRP35414 380 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 CDX1P47902 265 aaPredicted RBP12.17□□□□□ -0.46
ERCC3-202ENST00000426778 GLIPR1P48060 266 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 BTNL3Q6UXE8 466 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 MDP1Q86V88 176 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 MCEMP1Q8IX19 187 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 ZNF525Q8N782 197 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 CLEC18CQ8NCF0 446 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 PFDN5Q99471 154 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 SLC25A22Q9H936 323 aa12.17□□□□□ -0.46
ERCC3-202ENST00000426778 GAR1Q9NY12 217 aaKnown RBP12.17□□□□□ -0.46
ERCC3-202ENST00000426778 TNRC6AQ8NDV7 1962 aaKnown RBP12.16□□□□□ -0.46
ERCC3-202ENST00000426778 CLDN1O95832 211 aa12.16□□□□□ -0.46
ERCC3-202ENST00000426778 SSPNQ14714 243 aa12.16□□□□□ -0.46
ERCC3-202ENST00000426778 RTP5Q14D33 572 aa12.16□□□□□ -0.46
ERCC3-202ENST00000426778 SP5Q6BEB4 398 aaPredicted RBP12.16□□□□□ -0.46
ERCC3-202ENST00000426778 ZNF826PQ6ZT77 177 aa12.16□□□□□ -0.46
ERCC3-202ENST00000426778 RPUSD4Q96CM3 377 aaKnown RBP12.16□□□□□ -0.46
ERCC3-202ENST00000426778 FAM210BQ96KR6 192 aa12.16□□□□□ -0.46
ERCC3-202ENST00000426778 OR2J1Q9GZK6 312 aa12.16□□□□□ -0.46
ERCC3-202ENST00000426778 GALR2O43603 387 aaPredicted RBP12.16□□□□□ -0.46
ERCC3-202ENST00000426778 BCL2P10415 239 aa12.16□□□□□ -0.46
ERCC3-202ENST00000426778 DUSP3P51452 185 aaPredicted RBP12.16□□□□□ -0.46
ERCC3-202ENST00000426778 GNG3P63215 75 aa12.16□□□□□ -0.46
ERCC3-202ENST00000426778 CLN3Q13286 438 aa12.16□□□□□ -0.46
ERCC3-202ENST00000426778 ADIRFQ15847 76 aa12.16□□□□□ -0.46
ERCC3-202ENST00000426778 Q6ZS49 121 aa12.16□□□□□ -0.46
ERCC3-202ENST00000426778 GCNT2Q8N0V5 402 aa12.16□□□□□ -0.46
ERCC3-202ENST00000426778 PRO1933Q9H354 126 aa12.16□□□□□ -0.46
ERCC3-202ENST00000426778 AURKAIP1Q9NWT8 199 aaPredicted RBP12.16□□□□□ -0.46
ERCC3-202ENST00000426778 CLN8Q9UBY8 286 aa12.16□□□□□ -0.46
ERCC3-202ENST00000426778 TNRC6BQ9UPQ9 1833 aaKnown RBP12.15□□□□□ -0.46
ERCC3-202ENST00000426778 A0A1W2PNU3 283 aaPredicted RBP12.15□□□□□ -0.46
ERCC3-202ENST00000426778 FAM90A10PA6NDY2 464 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 BTBD17A6NE02 478 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 FAM90A18PA6NE21 464 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 FAM90A16PA6NEW6 464 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 FAM90A20PA6NIJ5 464 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 FAM90A8PA6NJQ4 464 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 FAM90A7PA6NKC0 464 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 FAM90A22PA8MWA6 464 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 FAM90A12PA8MX19 464 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 FAM90A5PA8MXJ8 464 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 FAM90A23PA8MXZ1 464 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 WNT9BO14905 357 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 IL18BPO95998 194 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 FAM90A15PP0C7V4 464 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 FAM90A13PP0C7W8 464 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 FAM90A14PP0C7W9 464 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 FAM90A24PP0C7X0 464 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 S100GP29377 79 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 G6PCP35575 357 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 NKX6-1P78426 367 aaPredicted RBP12.15□□□□□ -0.46
ERCC3-202ENST00000426778 TRA2AQ13595 282 aaKnown RBP eCLIP12.15□□□□□ -0.466e-7■□□□□ 10.5
ERCC3-202ENST00000426778 KHDC3LQ587J8 217 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 TMEM45BQ96B21 275 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 WDYHV1Q96HA8 205 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 FAM173AQ9BQD7 235 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 IL17BQ9UHF5 180 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 FZR1Q9UM11 496 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 C9orf172C9J069 976 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 LAMTOR5O43504 91 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 CTXN2P0C2S0 81 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 COL8A2P25067 703 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 IDH3GP51553 393 aaPredicted RBP12.15□□□□□ -0.46
ERCC3-202ENST00000426778 PMP22Q01453 160 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 LTC4SQ16873 150 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 ZNF573Q86YE8 665 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 C1QL4Q86Z23 238 aa12.15□□□□□ -0.46
ERCC3-202ENST00000426778 IGKV3D-15A0A087WSY6 115 aa12.14□□□□□ -0.47
ERCC3-202ENST00000426778 IGHV3-43A0A0B4J1X8 118 aa12.14□□□□□ -0.47
ERCC3-202ENST00000426778 A0A1B0GU03 582 aa12.14□□□□□ -0.47
ERCC3-202ENST00000426778 DFFBO76075 338 aa12.14□□□□□ -0.47
ERCC3-202ENST00000426778 IGHV3-13P01766 116 aa12.14□□□□□ -0.47
ERCC3-202ENST00000426778 IGHV3-7P01780 117 aa12.14□□□□□ -0.47
ERCC3-202ENST00000426778 IGHV3-43DP0DP04 118 aa12.14□□□□□ -0.47
ERCC3-202ENST00000426778 UNQ6494/PRO21346Q6UXR6 183 aa12.14□□□□□ -0.47
ERCC3-202ENST00000426778 DRAM1Q8N682 238 aa12.14□□□□□ -0.47
ERCC3-202ENST00000426778 SCCPDHQ8NBX0 429 aa12.14□□□□□ -0.47
ERCC3-202ENST00000426778 OR1L1Q8NH94 360 aa12.14□□□□□ -0.47
ERCC3-202ENST00000426778 ZDHHC16Q969W1 377 aa12.14□□□□□ -0.47
ERCC3-202ENST00000426778 MAP1LC3B2A6NCE7 125 aa12.14□□□□□ -0.47
ERCC3-202ENST00000426778 CXorf65A6NEN9 183 aa12.14□□□□□ -0.47
ERCC3-202ENST00000426778 DEFB108AA8MXU0 73 aa12.14□□□□□ -0.47
ERCC3-202ENST00000426778 CER1O95813 267 aa12.14□□□□□ -0.47
ERCC3-202ENST00000426778 HBE1P02100 147 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms