RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 RYDENQ9NUL5 291 aaKnown RBP13.77□□□□□ -0.21
PKP4-205ENST00000426248 MYO15AQ9UKN7 3530 aa13.77□□□□□ -0.21
PKP4-205ENST00000426248 SLC22A20A6NK97 555 aa13.76□□□□□ -0.21
PKP4-205ENST00000426248 IL18BPO95998 194 aa13.76□□□□□ -0.21
PKP4-205ENST00000426248 CNN1P51911 297 aaKnown RBP13.76□□□□□ -0.21
PKP4-205ENST00000426248 FAM3BP58499 235 aaPredicted RBP13.76□□□□□ -0.21
PKP4-205ENST00000426248 ATP6V1FQ16864 119 aa13.76□□□□□ -0.21
PKP4-205ENST00000426248 ACOT6Q3I5F7 207 aaPredicted RBP13.76□□□□□ -0.21
PKP4-205ENST00000426248 ZNF596Q8TC21 504 aa13.76□□□□□ -0.21
PKP4-205ENST00000426248 SPTSSAQ969W0 71 aa13.76□□□□□ -0.21
PKP4-205ENST00000426248 CYYR1Q96J86 154 aa13.76□□□□□ -0.21
PKP4-205ENST00000426248 SYT3Q9BQG1 590 aa13.76□□□□□ -0.21
PKP4-205ENST00000426248 PLK3Q9H4B4 646 aa13.76□□□□□ -0.21
PKP4-205ENST00000426248 SRD5A3Q9H8P0 318 aa13.76□□□□□ -0.21
PKP4-205ENST00000426248 TIMM8BQ9Y5J9 83 aaPredicted RBP13.76□□□□□ -0.21
PKP4-205ENST00000426248 GSTP1P09211 210 aaKnown RBP13.76□□□□□ -0.21
PKP4-205ENST00000426248 KCNIP4Q6PIL6 250 aa13.76□□□□□ -0.21
PKP4-205ENST00000426248 MYO7BQ6PIF6 2116 aa13.76□□□□□ -0.21
PKP4-205ENST00000426248 CHD8Q9HCK8 2581 aa13.76□□□□□ -0.21
PKP4-205ENST00000426248 GRIFINA4D1Z8 144 aa13.76□□□□□ -0.21
PKP4-205ENST00000426248 SUMO1P63165 101 aaKnown RBP13.76□□□□□ -0.21
PKP4-205ENST00000426248 PNRC1Q12796 327 aaPredicted RBP13.76□□□□□ -0.21
PKP4-205ENST00000426248 PDCD1Q15116 288 aa13.76□□□□□ -0.21
PKP4-205ENST00000426248 LTC4SQ16873 150 aa13.76□□□□□ -0.21
PKP4-205ENST00000426248 S100A7AQ86SG5 101 aa13.76□□□□□ -0.21
PKP4-205ENST00000426248 CMTM2Q8TAZ6 248 aa13.76□□□□□ -0.21
PKP4-205ENST00000426248 GPX7Q96SL4 187 aaPredicted RBP13.76□□□□□ -0.21
PKP4-205ENST00000426248 ATP5SQ99766 215 aa13.76□□□□□ -0.21
PKP4-205ENST00000426248 NEURL1O76050 574 aa13.75□□□□□ -0.21
PKP4-205ENST00000426248 GAGE1Q13065 139 aa13.75□□□□□ -0.21
PKP4-205ENST00000426248 Q6ZVH6 145 aa13.75□□□□□ -0.21
PKP4-205ENST00000426248 GJC3Q8NFK1 279 aa13.75□□□□□ -0.21
PKP4-205ENST00000426248 R4GMQ9 66 aa13.75□□□□□ -0.21
PKP4-205ENST00000426248 ZNF814B7Z6K7 855 aa13.75□□□□□ -0.21
PKP4-205ENST00000426248 BSXQ3C1V8 233 aa13.75□□□□□ -0.21
PKP4-205ENST00000426248 TUSC5Q8IXB3 177 aa13.75□□□□□ -0.21
PKP4-205ENST00000426248 SLC35E1Q96K37 410 aa13.75□□□□□ -0.21
PKP4-205ENST00000426248 SMDT1Q9H4I9 107 aa13.75□□□□□ -0.21
PKP4-205ENST00000426248 RPL36A-HNRNPH2H7BZ11 118 aa13.75□□□□□ -0.21
PKP4-205ENST00000426248 CRYABP02511 175 aaKnown RBP13.75□□□□□ -0.21
PKP4-205ENST00000426248 OR2T10Q8NGZ9 312 aa13.75□□□□□ -0.21
PKP4-205ENST00000426248 FAM122AQ96E09 287 aa13.75□□□□□ -0.21
PKP4-205ENST00000426248 PRSS50Q9UI38 385 aa13.75□□□□□ -0.21
PKP4-205ENST00000426248 PCNX3Q9H6A9 2034 aa13.75□□□□□ -0.21
PKP4-205ENST00000426248 NPIPB7O75200 414 aa13.75□□□□□ -0.21
PKP4-205ENST00000426248 FAM78BQ5VT40 261 aa13.75□□□□□ -0.21
PKP4-205ENST00000426248 HSPB9Q9BQS6 159 aa13.75□□□□□ -0.21
PKP4-205ENST00000426248 SRXN1Q9BYN0 137 aa13.75□□□□□ -0.21
PKP4-205ENST00000426248 K7N7A8 449 aa13.74□□□□□ -0.21
PKP4-205ENST00000426248 DYNLT3P51808 116 aa13.74□□□□□ -0.21
PKP4-205ENST00000426248 GNB2P62879 340 aa13.74□□□□□ -0.21
PKP4-205ENST00000426248 FADS6Q8N9I5 356 aa13.74□□□□□ -0.21
PKP4-205ENST00000426248 SARAFQ96BY9 339 aa13.74□□□□□ -0.21
PKP4-205ENST00000426248 ADAT3Q96EY9 351 aaPredicted RBP13.74□□□□□ -0.21
PKP4-205ENST00000426248 ZFP30Q9Y2G7 519 aa13.74□□□□□ -0.21
PKP4-205ENST00000426248 ST6GALNAC3Q8NDV1 305 aa13.74□□□□□ -0.21
PKP4-205ENST00000426248 UBALD1Q8TB05 177 aa13.74□□□□□ -0.21
PKP4-205ENST00000426248 GNPNAT1Q96EK6 184 aaPredicted RBP13.74□□□□□ -0.21
PKP4-205ENST00000426248 MIEN1Q9BRT3 115 aa13.74□□□□□ -0.21
PKP4-205ENST00000426248 SUCLG1P53597 346 aaKnown RBP13.74□□□□□ -0.21
PKP4-205ENST00000426248 RANP62826 216 aaKnown RBP13.74□□□□□ -0.21
PKP4-205ENST00000426248 TMEM241Q24JQ0 296 aa13.74□□□□□ -0.21
PKP4-205ENST00000426248 CALHM1Q8IU99 346 aa13.74□□□□□ -0.21
PKP4-205ENST00000426248 HDHD3Q9BSH5 251 aaPredicted RBP13.74□□□□□ -0.21
PKP4-205ENST00000426248 MAP1LC3B2A6NCE7 125 aa13.73□□□□□ -0.21
PKP4-205ENST00000426248 BMP5P22003 454 aa13.73□□□□□ -0.21
PKP4-205ENST00000426248 NUFIP2Q7Z417 695 aaKnown RBP13.73□□□□□ -0.21
PKP4-205ENST00000426248 MAP1LC3BQ9GZQ8 125 aa13.73□□□□□ -0.21
PKP4-205ENST00000426248 DLL3Q9NYJ7 618 aa13.73□□□□□ -0.21
PKP4-205ENST00000426248 CEACAM6P40199 344 aa13.73□□□□□ -0.21
PKP4-205ENST00000426248 ZNF154Q13106 437 aa13.73□□□□□ -0.21
PKP4-205ENST00000426248 ASPHD2Q6ICH7 369 aa13.73□□□□□ -0.21
PKP4-205ENST00000426248 OR4F5Q8NH21 305 aa13.73□□□□□ -0.21
PKP4-205ENST00000426248 PIGTQ969N2 578 aa13.73□□□□□ -0.21
PKP4-205ENST00000426248 OR4F4Q96R69 305 aa13.73□□□□□ -0.21
PKP4-205ENST00000426248 ZDHHC11Q9H8X9 412 aa13.73□□□□□ -0.21
PKP4-205ENST00000426248 KCNS2Q9ULS6 477 aa13.73□□□□□ -0.21
PKP4-205ENST00000426248 M0QZ24 198 aa13.73□□□□□ -0.21
PKP4-205ENST00000426248 RAD51DO75771 328 aa13.73□□□□□ -0.21
PKP4-205ENST00000426248 TGFBR3Q03167 851 aa13.73□□□□□ -0.21
PKP4-205ENST00000426248 PLAC9Q5JTB6 97 aa13.73□□□□□ -0.21
PKP4-205ENST00000426248 VAX1Q5SQQ9 334 aa13.73□□□□□ -0.21
PKP4-205ENST00000426248 SLC25A26Q70HW3 274 aa13.73□□□□□ -0.21
PKP4-205ENST00000426248 C6orf201Q7Z4U5 140 aa13.73□□□□□ -0.21
PKP4-205ENST00000426248 OR10S1Q8NGN2 331 aa13.73□□□□□ -0.21
PKP4-205ENST00000426248 RNASEH2CQ8TDP1 164 aaKnown RBP13.73□□□□□ -0.21
PKP4-205ENST00000426248 ACY3Q96HD9 319 aa13.73□□□□□ -0.21
PKP4-205ENST00000426248 FAM208BQ5VWN6 2430 aa13.72□□□□□ -0.21
PKP4-205ENST00000426248 IGKV1D-43A0A0B4J1Z2 117 aa13.72□□□□□ -0.21
PKP4-205ENST00000426248 TMEM210A6NLX4 147 aa13.72□□□□□ -0.21
PKP4-205ENST00000426248 TRAF3IP2O43734 574 aaPredicted RBP13.72□□□□□ -0.21
PKP4-205ENST00000426248 CATSPERDQ86XM0 798 aa13.72□□□□□ -0.21
PKP4-205ENST00000426248 TMEM256Q8N2U0 113 aa13.72□□□□□ -0.21
PKP4-205ENST00000426248 FOXB1Q99853 325 aa13.72□□□□□ -0.21
PKP4-205ENST00000426248 A0A1B0GU03 582 aa13.72□□□□□ -0.21
PKP4-205ENST00000426248 CDC14BO60729 498 aa13.72□□□□□ -0.21
PKP4-205ENST00000426248 ZNF17P17021 662 aa13.72□□□□□ -0.21
PKP4-205ENST00000426248 TPPP2P59282 170 aa13.72□□□□□ -0.21
PKP4-205ENST00000426248 FHL1Q13642 323 aa13.72□□□□□ -0.21
PKP4-205ENST00000426248 BRICD5Q6PL45 260 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms