RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 NDUFA5Q16718 116 aa11.98□□□□□ -0.49
CDK3-201ENST00000425876 PRSS54Q6PEW0 395 aa11.98□□□□□ -0.49
CDK3-201ENST00000425876 ACOT7LQ6ZUV0 252 aa11.98□□□□□ -0.49
CDK3-201ENST00000425876 ZNF645Q8N7E2 425 aa11.98□□□□□ -0.49
CDK3-201ENST00000425876 OR52L2PQ8NGH6 319 aa11.98□□□□□ -0.49
CDK3-201ENST00000425876 CORO2AQ92828 525 aa11.98□□□□□ -0.49
CDK3-201ENST00000425876 CCL13Q99616 98 aa11.98□□□□□ -0.49
CDK3-201ENST00000425876 RNF126Q9BV68 326 aa11.98□□□□□ -0.49
CDK3-201ENST00000425876 PARP12Q9H0J9 701 aaKnown RBP11.98□□□□□ -0.49
CDK3-201ENST00000425876 OR2S2Q9NQN1 319 aa11.98□□□□□ -0.49
CDK3-201ENST00000425876 ZFP57Q9NU63 452 aa11.98□□□□□ -0.49
CDK3-201ENST00000425876 MBD2Q9UBB5 411 aa11.98□□□□□ -0.49
CDK3-201ENST00000425876 IGHV1-69-2A0A0G2JMI3 117 aa11.97□□□□□ -0.49
CDK3-201ENST00000425876 RNF212BA8MTL3 300 aa11.97□□□□□ -0.49
CDK3-201ENST00000425876 TNFRSF13BO14836 293 aaPredicted RBP11.97□□□□□ -0.49
CDK3-201ENST00000425876 TSC22D2O75157 780 aa11.97□□□□□ -0.49
CDK3-201ENST00000425876 EDDM3BP56851 147 aa11.97□□□□□ -0.49
CDK3-201ENST00000425876 TMEM30BQ3MIR4 351 aa11.97□□□□□ -0.49
CDK3-201ENST00000425876 TMEM268Q5VZI3 342 aa11.97□□□□□ -0.49
CDK3-201ENST00000425876 TEX261Q6UWH6 196 aa11.97□□□□□ -0.49
CDK3-201ENST00000425876 ZNF695Q8IW36 515 aa11.97□□□□□ -0.49
CDK3-201ENST00000425876 SELENOHQ8IZQ5 122 aaKnown RBP11.97□□□□□ -0.49
CDK3-201ENST00000425876 KCNRGQ8N5I3 272 aa11.97□□□□□ -0.49
CDK3-201ENST00000425876 DRAM1Q8N682 238 aa11.97□□□□□ -0.49
CDK3-201ENST00000425876 SLC35G3Q8N808 338 aa11.97□□□□□ -0.49
CDK3-201ENST00000425876 EDARADDQ8WWZ3 215 aa11.97□□□□□ -0.49
CDK3-201ENST00000425876 CCL17Q92583 94 aa11.97□□□□□ -0.49
CDK3-201ENST00000425876 RBPMSQ93062 196 aaKnown RBP11.97□□□□□ -0.49
CDK3-201ENST00000425876 DCTN5Q9BTE1 182 aa11.97□□□□□ -0.49
CDK3-201ENST00000425876 ARL6Q9H0F7 186 aa11.97□□□□□ -0.49
CDK3-201ENST00000425876 LINC00574Q9H8X3 128 aa11.97□□□□□ -0.49
CDK3-201ENST00000425876 U3KQ87 197 aa11.97□□□□□ -0.49
CDK3-201ENST00000425876 TRGV10A0A0A0MS01 117 aa11.96□□□□□ -0.49
CDK3-201ENST00000425876 H0YIZ8 118 aa11.96□□□□□ -0.49
CDK3-201ENST00000425876 ITGB1BP1O14713 200 aa11.96□□□□□ -0.49
CDK3-201ENST00000425876 NDUFA2O43678 99 aa11.96□□□□□ -0.49
CDK3-201ENST00000425876 YPEL1O60688 119 aa11.96□□□□□ -0.49
CDK3-201ENST00000425876 SELLP14151 372 aa11.96□□□□□ -0.49
CDK3-201ENST00000425876 RAB32Q13637 225 aa11.96□□□□□ -0.49
CDK3-201ENST00000425876 GNMTQ14749 295 aa11.96□□□□□ -0.49
CDK3-201ENST00000425876 MEX3BQ6ZN04 569 aaKnown RBP11.96□□□□□ -0.49
CDK3-201ENST00000425876 FAM216BQ8N7L0 139 aa11.96□□□□□ -0.49
CDK3-201ENST00000425876 INO80EQ8NBZ0 244 aaPredicted RBP11.96□□□□□ -0.49
CDK3-201ENST00000425876 OR8H1Q8NGG4 311 aa11.96□□□□□ -0.49
CDK3-201ENST00000425876 RFESDQ8TAC1 157 aa11.96□□□□□ -0.49
CDK3-201ENST00000425876 YPEL2Q96QA6 119 aa11.96□□□□□ -0.49
CDK3-201ENST00000425876 SPIN2AQ99865 258 aa11.96□□□□□ -0.49
CDK3-201ENST00000425876 SPIN2BQ9BPZ2 258 aa11.96□□□□□ -0.49
CDK3-201ENST00000425876 LIN7CQ9NUP9 197 aaKnown RBP11.96□□□□□ -0.49
CDK3-201ENST00000425876 CALYQ9NYX4 217 aa11.96□□□□□ -0.49
CDK3-201ENST00000425876 GSKIPQ9P0R6 139 aa11.96□□□□□ -0.49
CDK3-201ENST00000425876 KAAG1Q9UBP8 84 aa11.96□□□□□ -0.49
CDK3-201ENST00000425876 KCNS2Q9ULS6 477 aa11.96□□□□□ -0.49
CDK3-201ENST00000425876 TANC2Q9HCD6 1990 aa11.96□□□□□ -0.49
CDK3-201ENST00000425876 TENM4Q6N022 2769 aa11.96□□□□□ -0.49
CDK3-201ENST00000425876 KBTBD11-OT1A0A1B0GTJ5 212 aa11.96□□□□□ -0.5
CDK3-201ENST00000425876 A0A1B0GW55 424 aa11.96□□□□□ -0.5
CDK3-201ENST00000425876 CLEC18AA5D8T8 446 aa11.96□□□□□ -0.5
CDK3-201ENST00000425876 RNF222A6NCQ9 220 aa11.96□□□□□ -0.5
CDK3-201ENST00000425876 TNFSF12O43508 249 aa11.96□□□□□ -0.5
CDK3-201ENST00000425876 DUX4L2P0CJ85 424 aa11.96□□□□□ -0.5
CDK3-201ENST00000425876 DUX4L3P0CJ86 424 aa11.96□□□□□ -0.5
CDK3-201ENST00000425876 DUX4L4P0CJ87 422 aa11.96□□□□□ -0.5
CDK3-201ENST00000425876 DUX4L5P0CJ88 424 aa11.96□□□□□ -0.5
CDK3-201ENST00000425876 DUX4L6P0CJ89 424 aa11.96□□□□□ -0.5
CDK3-201ENST00000425876 DUX4L7P0CJ90 424 aa11.96□□□□□ -0.5
CDK3-201ENST00000425876 VDAC1P21796 283 aa11.96□□□□□ -0.5
CDK3-201ENST00000425876 PPP1CCP36873 323 aaKnown RBP11.96□□□□□ -0.5
CDK3-201ENST00000425876 LOXL3P58215 753 aa11.96□□□□□ -0.5
CDK3-201ENST00000425876 MEF2CQ06413 473 aaPredicted RBP11.96□□□□□ -0.5
CDK3-201ENST00000425876 DUX4L9Q6RFH8 374 aaPredicted RBP11.96□□□□□ -0.5
CDK3-201ENST00000425876 TCTEX1D1Q8N7M0 179 aa11.96□□□□□ -0.5
CDK3-201ENST00000425876 CLEC18CQ8NCF0 446 aa11.96□□□□□ -0.5
CDK3-201ENST00000425876 ZNF680Q8NEM1 530 aa11.96□□□□□ -0.5
CDK3-201ENST00000425876 PLEKHF2Q9H8W4 249 aa11.96□□□□□ -0.5
CDK3-201ENST00000425876 FAM212BQ9NTI7 297 aaPredicted RBP11.96□□□□□ -0.5
CDK3-201ENST00000425876 CBLN4Q9NTU7 201 aa11.96□□□□□ -0.5
CDK3-201ENST00000425876 DUX4Q9UBX2 424 aa11.96□□□□□ -0.5
CDK3-201ENST00000425876 CLN8Q9UBY8 286 aa11.96□□□□□ -0.5
CDK3-201ENST00000425876 ZNF729A6NN14 1252 aaPredicted RBP11.95□□□□□ -0.5
CDK3-201ENST00000425876 TMPRSS2O15393 492 aa11.95□□□□□ -0.5
CDK3-201ENST00000425876 RP2O75695 350 aa11.95□□□□□ -0.5
CDK3-201ENST00000425876 IFNA7P01567 189 aa11.95□□□□□ -0.5
CDK3-201ENST00000425876 RLN2P04090 185 aa11.95□□□□□ -0.5
CDK3-201ENST00000425876 SERPINE2P07093 398 aa11.95□□□□□ -0.5
CDK3-201ENST00000425876 EIF4EBP1Q13541 118 aaPredicted RBP11.95□□□□□ -0.5
CDK3-201ENST00000425876 C17orf58Q2M2W7 97 aa11.95□□□□□ -0.5
CDK3-201ENST00000425876 HFEQ30201 348 aa11.95□□□□□ -0.5
CDK3-201ENST00000425876 MORN2Q502X0 79 aa11.95□□□□□ -0.5
CDK3-201ENST00000425876 NMSQ5H8A3 153 aa11.95□□□□□ -0.5
CDK3-201ENST00000425876 AGMATQ9BSE5 352 aa11.95□□□□□ -0.5
CDK3-201ENST00000425876 OR2D2Q9H210 308 aa11.95□□□□□ -0.5
CDK3-201ENST00000425876 GNG12Q9UBI6 72 aa11.95□□□□□ -0.5
CDK3-201ENST00000425876 SPTBN1Q01082 2364 aaKnown RBP11.95□□□□□ -0.5
CDK3-201ENST00000425876 ABCA4P78363 2273 aa11.95□□□□□ -0.5
CDK3-201ENST00000425876 UBR5O95071 2799 aaPredicted RBP11.94□□□□□ -0.5
CDK3-201ENST00000425876 hADV38S2A0JD32 116 aa11.94□□□□□ -0.5
CDK3-201ENST00000425876 SLC25A6P12236 298 aa11.94□□□□□ -0.5
CDK3-201ENST00000425876 SMCO1Q147U7 214 aa11.94□□□□□ -0.5
CDK3-201ENST00000425876 C11orf71Q6IPW1 123 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms