RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 B4DEV8 164 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 PTBP3O95758 552 aaKnown RBP6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 CEACAM6P40199 344 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 GNG3P63215 75 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 ZNF600Q6ZNG1 722 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 HAPLN4Q86UW8 402 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 OR5P3Q8WZ94 311 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 APH1AQ96BI3 265 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 BOKQ9UMX3 212 aaPredicted RBP6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 WDFY4Q6ZS81 3184 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 TRAV1-1A0A0B4J248 108 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 KRASP01116 189 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 APLNRP35414 380 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 ZFP36L1Q07352 338 aaKnown RBP6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 LPAL2Q16609 132 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 SRSF7Q16629 238 aaKnown RBP eCLIP6.39□□□□□ -1.393e-6■□□□□ 8.2
SMARCC1-202ENST00000425518 PMS2CLQ68D20 193 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 LINC00696Q6ZRV3 163 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 MCEMP1Q8IX19 187 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 POM121Q96HA1 1249 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 PACRGQ96M98 296 aaPredicted RBP6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 SMOC1Q9H4F8 434 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 OPA3Q9H6K4 179 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 UFSP2Q9NUQ7 469 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 VAX2Q9UIW0 290 aa6.39□□□□□ -1.39
SMARCC1-202ENST00000425518 SMCO3A2RU48 225 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 RBMXL2O75526 392 aaKnown RBP6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 HIST1H1BP16401 226 aaKnown RBP6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 MAGEA5P43359 124 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 ERVS71-1P61550 626 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 PNRC1Q12796 327 aaPredicted RBP6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 LRRC75BQ2VPJ9 315 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 MRGPRGQ86SM5 289 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 ZNF808Q8N4W9 903 aaPredicted RBP6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 POM121L2Q96KW2 1035 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 LAMP3Q9UQV4 416 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 ARHGAP21Q5T5U3 1957 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 PHOX2AO14813 284 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 IFNA1P01562 189 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 DUSP3P51452 185 aaPredicted RBP6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 PMP22Q01453 160 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 SLC38A11Q08AI6 406 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 ZNF585BQ52M93 769 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 DCAF12Q5T6F0 453 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 NCR3LG1Q68D85 454 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 TIPARPQ7Z3E1 657 aaKnown RBP6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 NUFIP2Q7Z417 695 aaKnown RBP6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 FGFRL1Q8N441 504 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 OR13D1Q8NGV5 346 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 CT55Q8WUE5 264 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 MBD3L1Q8WWY6 194 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 PRDM13Q9H4Q3 707 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 SLC25A22Q9H936 323 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 RIF1Q5UIP0 2472 aaKnown RBP6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 ELOA3CA0A087WX78 387 aaPredicted RBP6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 NTN3O00634 580 aaPredicted RBP6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 SERPINA7P05543 415 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 SELEP16581 610 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 PLGLB1Q02325 96 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 ZNF816Q0VGE8 651 aaPredicted RBP6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 FAM53AQ6NSI3 398 aaPredicted RBP6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 C16orf82Q7Z2V1 217 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 OR10G4Q8NGN3 311 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 TAF15Q92804 592 aaKnown RBP eCLIP6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 TMEM45BQ96B21 275 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 MEGF10Q96KG7 1140 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 WDR61Q9GZS3 305 aaKnown RBP6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 PRSS50Q9UI38 385 aa6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 TPRP12270 2363 aaKnown RBP6.38□□□□□ -1.39
SMARCC1-202ENST00000425518 YKT6O15498 198 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 OPN1MWP04001 364 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 OPN1MW2P0DN77 364 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 OPN1MW3P0DN78 364 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 ARR3P36575 388 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 WNT5AP41221 380 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 LHX2P50458 406 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 TRA2AQ13595 282 aaKnown RBP eCLIP6.37□□□□□ -1.392e-6■■□□□ 14.1
SMARCC1-202ENST00000425518 TMEM241Q24JQ0 296 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 TMEM41BQ5BJD5 291 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 SPINK9Q5DT21 86 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 ABHD17BQ5VST6 288 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 RPP25LQ8N5L8 163 aaKnown RBP6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 OR2M7Q8NG81 312 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 OR10A7Q8NGE5 316 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 OR4X1Q8NH49 305 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 GATAD1Q8WUU5 269 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 HLA-CQ95604 372 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 TMEM9BQ9NQ34 198 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 DOCK11Q5JSL3 2073 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 CDIPTO14735 213 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 OR2H2O95918 312 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 IGKV1D-33P01593 117 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 IGKV1-33P01594 117 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 IGLV2-14P01704 120 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 IGHEP01854 428 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 GRPP07492 148 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 SERF2P84101 59 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 ZXDAP98168 799 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 RTP5Q14D33 572 aa6.37□□□□□ -1.39
SMARCC1-202ENST00000425518 C6orf15Q6UXA7 325 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms