RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 ZNF879B4DU55 563 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 K7N7A8 449 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 SH2D1BO14796 132 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 ZNF780AO75290 641 aaPredicted RBP2.01□□□□□ -2.09
VPS13A-208ENST00000423463 CD37P11049 281 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 IGFBP3P17936 291 aaPredicted RBP2.01□□□□□ -2.09
VPS13A-208ENST00000423463 PSMA1P25786 263 aaKnown RBP2.01□□□□□ -2.09
VPS13A-208ENST00000423463 CHRNA7P36544 502 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 PTGFRP43088 359 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 RANBP1P43487 201 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 GMFBP60983 142 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 MLLT11Q13015 90 aaPredicted RBP2.01□□□□□ -2.09
VPS13A-208ENST00000423463 GPR176Q14439 515 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 ZNF146Q15072 292 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 DGUOKQ16854 277 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 C14orf177Q52M58 125 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 ACSM3Q53FZ2 586 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 SPIN3Q5JUX0 258 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 GSG1LQ6UXU4 331 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 KIR3DL3Q8N743 410 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 FAM216BQ8N7L0 139 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 ZFP41Q8N8Y5 198 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 ZNF383Q8NA42 475 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 ZNRF1Q8ND25 227 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 OCC1Q8TAD7 63 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 ZNF418Q8TF45 676 aaPredicted RBP2.01□□□□□ -2.09
VPS13A-208ENST00000423463 DERL3Q96Q80 235 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 OR5M11Q96RB7 305 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 GPER1Q99527 375 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 MGLLQ99685 303 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 CCDC90BQ9GZT6 254 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 SIRPDQ9H106 197 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 HMG20AQ9NP66 347 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 PAK1IP1Q9NWT1 392 aaPredicted RBP2.01□□□□□ -2.09
VPS13A-208ENST00000423463 TAS2R4Q9NYW5 299 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 NUP50Q9UKX7 468 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 RNF150Q9ULK6 438 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 ING4Q9UNL4 249 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 KPTNQ9Y664 436 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 TANC2Q9HCD6 1990 aa2.01□□□□□ -2.09
VPS13A-208ENST00000423463 TACC2O95359 2948 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 IGKV1-12A0A0C4DH73 117 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 A0A1W2PPK0 400 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 A0A1W2PRV1 198 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 F8VVB4 439 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 F8VWA3 439 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 M0R1W7 72 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 GABRPO00591 440 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 PIN1P1O15428 100 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 ANGPTL7O43827 346 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 ZNF737O75373 536 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 FCN3O75636 299 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 HAND1O96004 215 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 IGKV1D-12P01611 117 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 UCHL1P09936 223 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 PRKACAP17612 351 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 BCL3P20749 454 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 PRTN3P24158 256 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 ERP29P30040 261 aaKnown RBP2□□□□□ -2.09
VPS13A-208ENST00000423463 ZNF93P35789 620 aaPredicted RBP2□□□□□ -2.09
VPS13A-208ENST00000423463 NPBWR2P48146 333 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 KRTAP10-7P60409 375 aaPredicted RBP2□□□□□ -2.09
VPS13A-208ENST00000423463 FGF12P61328 243 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 ARF6P62330 175 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 DLK1P80370 383 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 EMX1Q04741 257 aaPredicted RBP2□□□□□ -2.09
VPS13A-208ENST00000423463 MEF2CQ06413 473 aaPredicted RBP2□□□□□ -2.09
VPS13A-208ENST00000423463 ARMCX4Q5H9R4 360 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 KLF17Q5JT82 389 aaPredicted RBP2□□□□□ -2.09
VPS13A-208ENST00000423463 DDI2Q5TDH0 399 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 METTL11BQ5VVY1 283 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 ASPHD2Q6ICH7 369 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 METAP1DQ6UB28 335 aaPredicted RBP2□□□□□ -2.09
VPS13A-208ENST00000423463 IL17RELQ6ZVW7 336 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 CEACAM19Q7Z692 300 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 ZNF554Q86TJ5 538 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 PHC2Q8IXK0 858 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 CHST4Q8NCG5 386 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 TMEM185AQ8NFB2 350 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 OR51A2Q8NGJ7 313 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 OR51T1Q8NGJ9 327 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 OR13C5Q8NGS8 318 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 TNFAIP8L1Q8WVP5 186 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 H1FXQ92522 213 aaKnown RBP2□□□□□ -2.09
VPS13A-208ENST00000423463 FCGR1BQ92637 280 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 CORO2AQ92828 525 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 UFD1Q92890 307 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 EMG1Q92979 244 aaKnown RBP2□□□□□ -2.09
VPS13A-208ENST00000423463 RFT1Q96AA3 541 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 SPACA5Q96QH8 159 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 S100A13Q99584 98 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 LITAFQ99732 161 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 SUCNR1Q9BXA5 334 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 SLITRK2Q9H156 845 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 METTL9Q9H1A3 318 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 NCOR1P1Q9H4R4 102 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 HEXA-AS1Q9H8Q6 139 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 Q9H8V8 135 aa2□□□□□ -2.09
VPS13A-208ENST00000423463 EXOSC4Q9NPD3 245 aaKnown RBP2□□□□□ -2.09
VPS13A-208ENST00000423463 ACOT13Q9NPJ3 140 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms