RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 PRRX1P54821 245 aa13.79□□□□□ -0.2
COL7A1-202ENST00000422991 LGALS4P56470 323 aa13.79□□□□□ -0.2
COL7A1-202ENST00000422991 ARPC4P59998 168 aa13.79□□□□□ -0.2
COL7A1-202ENST00000422991 LDLRAD2Q5SZI1 272 aa13.79□□□□□ -0.2
COL7A1-202ENST00000422991 SLC25A48Q6ZT89 311 aaKnown RBP13.79□□□□□ -0.2
COL7A1-202ENST00000422991 PRIMA1Q86XR5 153 aa13.79□□□□□ -0.2
COL7A1-202ENST00000422991 BCL6BQ8N143 479 aaPredicted RBP13.79□□□□□ -0.2
COL7A1-202ENST00000422991 FCAMRQ8WWV6 532 aa13.79□□□□□ -0.2
COL7A1-202ENST00000422991 C22orf15Q8WYQ4 148 aa13.79□□□□□ -0.2
COL7A1-202ENST00000422991 TOLLIPQ9H0E2 274 aa13.79□□□□□ -0.2
COL7A1-202ENST00000422991 PARP12Q9H0J9 701 aaKnown RBP13.79□□□□□ -0.2
COL7A1-202ENST00000422991 MTFP1Q9UDX5 166 aa13.79□□□□□ -0.2
COL7A1-202ENST00000422991 GSTZ1O43708 216 aaPredicted RBP13.78□□□□□ -0.2
COL7A1-202ENST00000422991 CTXN2P0C2S0 81 aa13.78□□□□□ -0.2
COL7A1-202ENST00000422991 CEACAM6P40199 344 aa13.78□□□□□ -0.2
COL7A1-202ENST00000422991 ZNF134P52741 427 aa13.78□□□□□ -0.2
COL7A1-202ENST00000422991 ACTBP60709 375 aa13.78□□□□□ -0.2
COL7A1-202ENST00000422991 ACTG1P63261 375 aa13.78□□□□□ -0.2
COL7A1-202ENST00000422991 CT45A1Q5HYN5 189 aa13.78□□□□□ -0.2
COL7A1-202ENST00000422991 MINOS1Q5TGZ0 78 aa13.78□□□□□ -0.2
COL7A1-202ENST00000422991 LINC00299Q6ZSB3 139 aa13.78□□□□□ -0.2
COL7A1-202ENST00000422991 LHFPL4Q7Z7J7 247 aa13.78□□□□□ -0.2
COL7A1-202ENST00000422991 OR5AP2Q8NGF4 316 aa13.78□□□□□ -0.2
COL7A1-202ENST00000422991 OR10J5Q8NHC4 309 aa13.78□□□□□ -0.2
COL7A1-202ENST00000422991 CT45A3Q8NHU0 189 aa13.78□□□□□ -0.2
COL7A1-202ENST00000422991 C17orf50Q8WW18 174 aa13.78□□□□□ -0.2
COL7A1-202ENST00000422991 SLC6A7Q99884 636 aa13.78□□□□□ -0.2
COL7A1-202ENST00000422991 ABHD14AQ9BUJ0 271 aa13.78□□□□□ -0.2
COL7A1-202ENST00000422991 KLK11Q9UBX7 282 aa13.78□□□□□ -0.2
COL7A1-202ENST00000422991 AMMECR1Q9Y4X0 333 aaPredicted RBP13.78□□□□□ -0.2
COL7A1-202ENST00000422991 MINOS1-NBL1R4GNA1 71 aa13.78□□□□□ -0.2
COL7A1-202ENST00000422991 BUB1B-PAK6H3BSN5 160 aa13.77□□□□□ -0.21
COL7A1-202ENST00000422991 ITGB1BP1O14713 200 aa13.77□□□□□ -0.21
COL7A1-202ENST00000422991 RBBP9O75884 186 aa13.77□□□□□ -0.21
COL7A1-202ENST00000422991 HTR1DP28221 377 aa13.77□□□□□ -0.21
COL7A1-202ENST00000422991 TAS2R46P59540 309 aa13.77□□□□□ -0.21
COL7A1-202ENST00000422991 SSBP1Q04837 148 aaKnown RBP13.77□□□□□ -0.21
COL7A1-202ENST00000422991 PYDC2Q56P42 97 aa13.77□□□□□ -0.21
COL7A1-202ENST00000422991 H1FOOQ8IZA3 346 aaPredicted RBP13.77□□□□□ -0.21
COL7A1-202ENST00000422991 OR2AK2Q8NG84 335 aa13.77□□□□□ -0.21
COL7A1-202ENST00000422991 OR10X1Q8NGY0 326 aa13.77□□□□□ -0.21
COL7A1-202ENST00000422991 EDARADDQ8WWZ3 215 aa13.77□□□□□ -0.21
COL7A1-202ENST00000422991 GINS4Q9BRT9 223 aa13.77□□□□□ -0.21
COL7A1-202ENST00000422991 NECAP2Q9NVZ3 263 aa13.77□□□□□ -0.21
COL7A1-202ENST00000422991 RDH8Q9NYR8 311 aa13.77□□□□□ -0.21
COL7A1-202ENST00000422991 RBMX2Q9Y388 322 aaKnown RBP13.77□□□□□ -0.21
COL7A1-202ENST00000422991 MDFIC2A0A1B0GVS7 189 aa13.76□□□□□ -0.21
COL7A1-202ENST00000422991 LY6LH3BQJ8 138 aa13.76□□□□□ -0.21
COL7A1-202ENST00000422991 CDK10Q15131 360 aa13.76□□□□□ -0.21
COL7A1-202ENST00000422991 DEFB112Q30KQ8 113 aa13.76□□□□□ -0.21
COL7A1-202ENST00000422991 LYSMD2Q8IV50 215 aa13.76□□□□□ -0.21
COL7A1-202ENST00000422991 DYNAPQ8N1N2 210 aa13.76□□□□□ -0.21
COL7A1-202ENST00000422991 MFSD4AQ8N468 514 aa13.76□□□□□ -0.21
COL7A1-202ENST00000422991 CREB3L1Q96BA8 519 aa13.76□□□□□ -0.21
COL7A1-202ENST00000422991 ZNF48Q96MX3 618 aaPredicted RBP13.76□□□□□ -0.21
COL7A1-202ENST00000422991 SRRQ9GZT4 340 aa13.76□□□□□ -0.21
COL7A1-202ENST00000422991 C11orf54Q9H0W9 315 aaPredicted RBP13.76□□□□□ -0.21
COL7A1-202ENST00000422991 IFI27L2Q9H2X8 130 aa13.76□□□□□ -0.21
COL7A1-202ENST00000422991 AKIP1Q9NQ31 210 aa13.76□□□□□ -0.21
COL7A1-202ENST00000422991 DPM3Q9P2X0 92 aa13.76□□□□□ -0.21
COL7A1-202ENST00000422991 FAM96BQ9Y3D0 163 aa13.76□□□□□ -0.21
COL7A1-202ENST00000422991 LEUTXA8MZ59 168 aa13.75□□□□□ -0.21
COL7A1-202ENST00000422991 FBP1P09467 338 aa13.75□□□□□ -0.21
COL7A1-202ENST00000422991 OR5H8P0DN80 308 aa13.75□□□□□ -0.21
COL7A1-202ENST00000422991 HLA-DMAP28067 261 aa13.75□□□□□ -0.21
COL7A1-202ENST00000422991 HRH1P35367 487 aa13.75□□□□□ -0.21
COL7A1-202ENST00000422991 CEACAM3P40198 252 aa13.75□□□□□ -0.21
COL7A1-202ENST00000422991 RAB7AP51149 207 aa13.75□□□□□ -0.21
COL7A1-202ENST00000422991 ZNF137PP52743 207 aa13.75□□□□□ -0.21
COL7A1-202ENST00000422991 TPTE2P1Q5T6R2 138 aa13.75□□□□□ -0.21
COL7A1-202ENST00000422991 OR5H2Q8NGV7 314 aa13.75□□□□□ -0.21
COL7A1-202ENST00000422991 MALSU1Q96EH3 234 aa13.75□□□□□ -0.21
COL7A1-202ENST00000422991 PRDM13Q9H4Q3 707 aa13.75□□□□□ -0.21
COL7A1-202ENST00000422991 ZNF107Q9UII5 783 aaPredicted RBP13.75□□□□□ -0.21
COL7A1-202ENST00000422991 ZNF736B4DX44 427 aaPredicted RBP13.74□□□□□ -0.21
COL7A1-202ENST00000422991 ST8SIA5O15466 376 aa13.74□□□□□ -0.21
COL7A1-202ENST00000422991 LANCL1O43813 399 aa13.74□□□□□ -0.21
COL7A1-202ENST00000422991 TUSC2O75896 110 aa13.74□□□□□ -0.21
COL7A1-202ENST00000422991 PMP2P02689 132 aa13.74□□□□□ -0.21
COL7A1-202ENST00000422991 TBPP20226 339 aa13.74□□□□□ -0.21
COL7A1-202ENST00000422991 NFYAP23511 347 aaPredicted RBP13.74□□□□□ -0.21
COL7A1-202ENST00000422991 IL3RAP26951 378 aa13.74□□□□□ -0.21
COL7A1-202ENST00000422991 OR3A3P47888 321 aa13.74□□□□□ -0.21
COL7A1-202ENST00000422991 ZNF45Q02386 682 aa13.74□□□□□ -0.21
COL7A1-202ENST00000422991 ACTBL2Q562R1 376 aa13.74□□□□□ -0.21
COL7A1-202ENST00000422991 OVCH2Q7RTZ1 564 aa13.74□□□□□ -0.21
COL7A1-202ENST00000422991 ODF3L1Q8IXM7 274 aa13.74□□□□□ -0.21
COL7A1-202ENST00000422991 Q8N402 240 aa13.74□□□□□ -0.21
COL7A1-202ENST00000422991 SIGLECL1Q8N7X8 197 aa13.74□□□□□ -0.21
COL7A1-202ENST00000422991 FAM216AQ8WUB2 273 aa13.74□□□□□ -0.21
COL7A1-202ENST00000422991 TRIM63Q969Q1 353 aa13.74□□□□□ -0.21
COL7A1-202ENST00000422991 ST6GALNAC6Q969X2 333 aa13.74□□□□□ -0.21
COL7A1-202ENST00000422991 AGMATQ9BSE5 352 aa13.74□□□□□ -0.21
COL7A1-202ENST00000422991 EHFQ9NZC4 300 aa13.74□□□□□ -0.21
COL7A1-202ENST00000422991 CUBNO60494 3623 aa13.74□□□□□ -0.21
COL7A1-202ENST00000422991 OOSP1A8MZH6 123 aa13.73□□□□□ -0.21
COL7A1-202ENST00000422991 IFNA2P01563 188 aa13.73□□□□□ -0.21
COL7A1-202ENST00000422991 PAX6P26367 422 aa13.73□□□□□ -0.21
COL7A1-202ENST00000422991 RFX2P48378 723 aa13.73□□□□□ -0.21
COL7A1-202ENST00000422991 DYRK1AQ13627 763 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms