RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 FGFRL1Q8N441 504 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 PHYHIPLQ96FC7 376 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 TMEM56Q96MV1 263 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 RIMS4Q9H426 269 aaPredicted RBP7.38□□□□□ -1.23
SNCA-206ENST00000420646 HES4Q9HCC6 221 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 TMED3Q9Y3Q3 217 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 TMEM56-RWDD3S4R434 201 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 PTPN13Q12923 2485 aa7.38□□□□□ -1.23
SNCA-206ENST00000420646 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.37□□□□□ -1.23
SNCA-206ENST00000420646 IGSF23A1L1A6 192 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 E5RGE8 158 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 PRSS44E7EML9 344 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 HBZP02008 142 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 CRYABP02511 175 aaKnown RBP7.37□□□□□ -1.23
SNCA-206ENST00000420646 HEXAP06865 529 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 HOXB1P14653 301 aaPredicted RBP7.37□□□□□ -1.23
SNCA-206ENST00000420646 KITLGP21583 273 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 UCP1P25874 307 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 NMSQ5H8A3 153 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 KRBOX4Q5JUW0 171 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 WFDC8Q8IUA0 241 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 Q8IYB0 196 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 DRAM1Q8N682 238 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 RNASE11Q8TAA1 199 aaKnown RBP7.37□□□□□ -1.23
SNCA-206ENST00000420646 FAM57AQ8TBR7 257 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 RNF141Q8WVD5 230 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 TMEM171Q8WVE6 324 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 LEAP2Q969E1 77 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 MARC2Q969Z3 335 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 GPR146Q96CH1 333 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 MRPL37Q9BZE1 423 aaKnown RBP7.37□□□□□ -1.23
SNCA-206ENST00000420646 NSG2Q9Y328 171 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 SESN1Q9Y6P5 492 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 IGKV1D-17A0A075B6S4 117 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 WRBO00258 174 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 ABCD4O14678 606 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 CTXN2P0C2S0 81 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 IL2RGP31785 369 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 ERVFRD-1P60508 538 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 RPS16P62249 146 aaKnown RBP7.37□□□□□ -1.23
SNCA-206ENST00000420646 RPL30P62888 115 aaKnown RBP7.37□□□□□ -1.23
SNCA-206ENST00000420646 TIMM23BQ5SRD1 257 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 ODF3L1Q8IXM7 274 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 GCSAMQ8N6F7 178 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 ITLN1Q8WWA0 313 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 ABHD14AQ9BUJ0 271 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 DNTTIP1Q9H147 329 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 OR2D2Q9H210 308 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 IFT22Q9H7X7 185 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 MBNL3Q9NUK0 354 aaKnown RBP7.37□□□□□ -1.23
SNCA-206ENST00000420646 LPAR3Q9UBY5 353 aa7.37□□□□□ -1.23
SNCA-206ENST00000420646 KMT2BQ9UMN6 2715 aaPredicted RBP7.37□□□□□ -1.23
SNCA-206ENST00000420646 TRBV6-6A0A0A6YYG2 114 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 TMEM210A6NLX4 147 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 FGF16O43320 207 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 PRDX2P32119 198 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 ZNF816Q0VGE8 651 aaPredicted RBP7.36□□□□□ -1.23
SNCA-206ENST00000420646 SRSF7Q16629 238 aaKnown RBP eCLIP7.36□□□□□ -1.23
SNCA-206ENST00000420646 TBR1Q16650 682 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 ZNF585BQ52M93 769 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 MBNL2Q5VZF2 373 aaKnown RBP7.36□□□□□ -1.23
SNCA-206ENST00000420646 GFRALQ6UXV0 394 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 HSD17B13Q7Z5P4 300 aaPredicted RBP7.36□□□□□ -1.23
SNCA-206ENST00000420646 POM121Q96HA1 1249 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 CABLES2Q9BTV7 478 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 FAM234AQ9H0X4 552 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 MED9Q9NWA0 146 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 DSCAMO60469 2012 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 ST8SIA5O15466 376 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 EIF3GO75821 320 aaKnown RBP eCLIP7.36□□□□□ -1.23
SNCA-206ENST00000420646 KRASP01116 189 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 IGKV1-5P01602 117 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 HOXD4P09016 255 aaPredicted RBP7.36□□□□□ -1.23
SNCA-206ENST00000420646 IAPPP10997 89 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 ADCYAP1P18509 176 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 VDAC1P21796 283 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 CCL8P80075 99 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 RUNX1Q01196 453 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 EWSR1Q01844 656 aaKnown RBP eCLIP7.36□□□□□ -1.23
SNCA-206ENST00000420646 OR2C3Q8N628 320 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 ARL11Q969Q4 196 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 GALMQ96C23 342 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 BOD1Q96IK1 185 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 CACNG5Q9UF02 275 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 POMT1Q9Y6A1 747 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 CELSR1Q9NYQ6 3014 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 AKAP6Q13023 2319 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 A0A1W2PPE3 182 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 TMEM30CPA0ZSE6 113 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 C9JQL5 133 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 CYB5R3P00387 301 aaPredicted RBP7.36□□□□□ -1.23
SNCA-206ENST00000420646 CEACAM8P31997 349 aaPredicted RBP7.36□□□□□ -1.23
SNCA-206ENST00000420646 TIMP3P35625 211 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 TDGF1P3P51864 188 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 EDDM3BP56851 147 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 KLF3P57682 345 aaPredicted RBP7.36□□□□□ -1.23
SNCA-206ENST00000420646 B2MP61769 119 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 GUCA2BQ16661 112 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 SPINK9Q5DT21 86 aa7.36□□□□□ -1.23
SNCA-206ENST00000420646 FAM185AQ8N0U4 392 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms