RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 BANF2Q9H503 90 aa9.9□□□□□ -0.82
LINC00339-203ENST00000420503 RETNQ9HD89 108 aa9.9□□□□□ -0.82
LINC00339-203ENST00000420503 MRPS18AQ9NVS2 196 aaKnown RBP9.9□□□□□ -0.82
LINC00339-203ENST00000420503 ETAA1Q9NY74 926 aa9.9□□□□□ -0.82
LINC00339-203ENST00000420503 RCC2Q9P258 522 aaKnown RBP9.9□□□□□ -0.82
LINC00339-203ENST00000420503 TRAPPC2LQ9UL33 140 aa9.9□□□□□ -0.82
LINC00339-203ENST00000420503 A0A1W2PPK0 400 aa9.89□□□□□ -0.83
LINC00339-203ENST00000420503 UBE2QL1A1L167 161 aa9.89□□□□□ -0.83
LINC00339-203ENST00000420503 LINC01619G3V211 115 aa9.89□□□□□ -0.83
LINC00339-203ENST00000420503 NBR2O15453 112 aa9.89□□□□□ -0.83
LINC00339-203ENST00000420503 CSTBP04080 98 aaKnown RBP9.89□□□□□ -0.83
LINC00339-203ENST00000420503 OR5H8P0DN80 308 aa9.89□□□□□ -0.83
LINC00339-203ENST00000420503 BDKRB2P30411 391 aa9.89□□□□□ -0.83
LINC00339-203ENST00000420503 GBX2P52951 348 aaPredicted RBP9.89□□□□□ -0.83
LINC00339-203ENST00000420503 DEFA5Q01523 94 aa9.89□□□□□ -0.83
LINC00339-203ENST00000420503 DOC2BQ14184 412 aa9.89□□□□□ -0.83
LINC00339-203ENST00000420503 MPV17LQ2QL34 196 aa9.89□□□□□ -0.83
LINC00339-203ENST00000420503 MORN2Q502X0 79 aa9.89□□□□□ -0.83
LINC00339-203ENST00000420503 RAB12Q6IQ22 244 aa9.89□□□□□ -0.83
LINC00339-203ENST00000420503 LAIR2Q6ISS4 152 aa9.89□□□□□ -0.83
LINC00339-203ENST00000420503 GLDNQ6ZMI3 551 aaPredicted RBP9.89□□□□□ -0.83
LINC00339-203ENST00000420503 ZFP41Q8N8Y5 198 aa9.89□□□□□ -0.83
LINC00339-203ENST00000420503 MUL1Q969V5 352 aa9.89□□□□□ -0.83
LINC00339-203ENST00000420503 Q96MT0 163 aa9.89□□□□□ -0.83
LINC00339-203ENST00000420503 MS4A10Q96PG2 267 aa9.89□□□□□ -0.83
LINC00339-203ENST00000420503 KRTAP17-1Q9BYP8 105 aa9.89□□□□□ -0.83
LINC00339-203ENST00000420503 ZMAT4Q9H898 229 aa9.89□□□□□ -0.83
LINC00339-203ENST00000420503 TAF9BQ9HBM6 251 aa9.89□□□□□ -0.83
LINC00339-203ENST00000420503 TMEM138Q9NPI0 162 aa9.89□□□□□ -0.83
LINC00339-203ENST00000420503 OR2S2Q9NQN1 319 aa9.89□□□□□ -0.83
LINC00339-203ENST00000420503 SAA2-SAA4A0A096LPE2 208 aa9.88□□□□□ -0.83
LINC00339-203ENST00000420503 SNTNA6NMZ2 147 aa9.88□□□□□ -0.83
LINC00339-203ENST00000420503 TXNL1O43396 289 aa9.88□□□□□ -0.83
LINC00339-203ENST00000420503 LGALS1P09382 135 aaKnown RBP9.88□□□□□ -0.83
LINC00339-203ENST00000420503 SAA2P0DJI9 122 aaPredicted RBP9.88□□□□□ -0.83
LINC00339-203ENST00000420503 IGFBP3P17936 291 aaPredicted RBP9.88□□□□□ -0.83
LINC00339-203ENST00000420503 ETV1P50549 477 aa9.88□□□□□ -0.83
LINC00339-203ENST00000420503 FAM131AQ6UXB0 335 aa9.88□□□□□ -0.83
LINC00339-203ENST00000420503 GAPTQ8N292 157 aa9.88□□□□□ -0.83
LINC00339-203ENST00000420503 SETD9Q8NE22 299 aa9.88□□□□□ -0.83
LINC00339-203ENST00000420503 GPR148Q8TDV2 347 aa9.88□□□□□ -0.83
LINC00339-203ENST00000420503 ZNF251Q9BRH9 671 aa9.88□□□□□ -0.83
LINC00339-203ENST00000420503 ABHD14AQ9BUJ0 271 aa9.88□□□□□ -0.83
LINC00339-203ENST00000420503 C19orf73Q9NVV2 129 aa9.88□□□□□ -0.83
LINC00339-203ENST00000420503 ADAM30Q9UKF2 790 aa9.88□□□□□ -0.83
LINC00339-203ENST00000420503 ALMS1Q8TCU4 4167 aa9.88□□□□□ -0.83
LINC00339-203ENST00000420503 ST8SIA5O15466 376 aa9.87□□□□□ -0.83
LINC00339-203ENST00000420503 SPINT2O43291 252 aa9.87□□□□□ -0.83
LINC00339-203ENST00000420503 NDUFA3O95167 84 aa9.87□□□□□ -0.83
LINC00339-203ENST00000420503 GTF2F2P13984 249 aa9.87□□□□□ -0.83
LINC00339-203ENST00000420503 PPP3R1P63098 170 aa9.87□□□□□ -0.83
LINC00339-203ENST00000420503 CX3CL1P78423 397 aa9.87□□□□□ -0.83
LINC00339-203ENST00000420503 RAB40BQ12829 278 aa9.87□□□□□ -0.83
LINC00339-203ENST00000420503 Q3ZCU0 254 aa9.87□□□□□ -0.83
LINC00339-203ENST00000420503 RPL39P5Q59GN2 51 aa9.87□□□□□ -0.83
LINC00339-203ENST00000420503 LIN54Q6MZP7 749 aa9.87□□□□□ -0.83
LINC00339-203ENST00000420503 GLIPR1L1Q6UWM5 242 aa9.87□□□□□ -0.83
LINC00339-203ENST00000420503 C8orf59Q8N0T1 100 aaPredicted RBP9.87□□□□□ -0.83
LINC00339-203ENST00000420503 STX19Q8N4C7 294 aa9.87□□□□□ -0.83
LINC00339-203ENST00000420503 MRPL30Q8TCC3 161 aaKnown RBP9.87□□□□□ -0.83
LINC00339-203ENST00000420503 CPNE2Q96FN4 548 aaPredicted RBP9.87□□□□□ -0.83
LINC00339-203ENST00000420503 CLCC1Q96S66 551 aa9.87□□□□□ -0.83
LINC00339-203ENST00000420503 RSRP1Q9BUV0 290 aa9.87□□□□□ -0.83
LINC00339-203ENST00000420503 IFI27L2Q9H2X8 130 aa9.87□□□□□ -0.83
LINC00339-203ENST00000420503 VCX3BQ9H321 246 aa9.87□□□□□ -0.83
LINC00339-203ENST00000420503 CLEC2DQ9UHP7 191 aa9.87□□□□□ -0.83
LINC00339-203ENST00000420503 MRPS28Q9Y2Q9 187 aaKnown RBP9.87□□□□□ -0.83
LINC00339-203ENST00000420503 RPL36Q9Y3U8 105 aaKnown RBP9.87□□□□□ -0.83
LINC00339-203ENST00000420503 PEX16Q9Y5Y5 336 aa9.87□□□□□ -0.83
LINC00339-203ENST00000420503 MCRIP1C9JLW8 97 aa9.86□□□□□ -0.83
LINC00339-203ENST00000420503 FADS2O95864 444 aaKnown RBP9.86□□□□□ -0.83
LINC00339-203ENST00000420503 LINC00205P59089 165 aa9.86□□□□□ -0.83
LINC00339-203ENST00000420503 RPS11P62280 158 aaKnown RBP eCLIP9.86□□□□□ -0.83
LINC00339-203ENST00000420503 PITPNAQ00169 270 aa9.86□□□□□ -0.83
LINC00339-203ENST00000420503 IZUMO2Q6UXV1 221 aa9.86□□□□□ -0.83
LINC00339-203ENST00000420503 ZNF833PQ6ZTB9 187 aa9.86□□□□□ -0.83
LINC00339-203ENST00000420503 LINC00596Q86U02 117 aa9.86□□□□□ -0.83
LINC00339-203ENST00000420503 NPBQ8NG41 125 aa9.86□□□□□ -0.83
LINC00339-203ENST00000420503 OR6Q1Q8NGQ2 317 aa9.86□□□□□ -0.83
LINC00339-203ENST00000420503 FAM46BQ96A09 425 aa9.86□□□□□ -0.83
LINC00339-203ENST00000420503 ISOC1Q96CN7 298 aa9.86□□□□□ -0.83
LINC00339-203ENST00000420503 S100A13Q99584 98 aa9.86□□□□□ -0.83
LINC00339-203ENST00000420503 FAM110AQ9BQ89 295 aa9.86□□□□□ -0.83
LINC00339-203ENST00000420503 SELENOIQ9C0D9 397 aa9.86□□□□□ -0.83
LINC00339-203ENST00000420503 FGF20Q9NP95 211 aaPredicted RBP9.86□□□□□ -0.83
LINC00339-203ENST00000420503 FOXA2Q9Y261 457 aaPredicted RBP9.86□□□□□ -0.83
LINC00339-203ENST00000420503 TRBV5-5A0A0J9YX44 114 aa9.85□□□□□ -0.83
LINC00339-203ENST00000420503 LDLRAD4O15165 306 aa9.85□□□□□ -0.83
LINC00339-203ENST00000420503 MAS1P04201 325 aa9.85□□□□□ -0.83
LINC00339-203ENST00000420503 CD2P06729 351 aa9.85□□□□□ -0.83
LINC00339-203ENST00000420503 OR8U9P0C7N5 309 aa9.85□□□□□ -0.83
LINC00339-203ENST00000420503 HAGHQ16775 308 aa9.85□□□□□ -0.83
LINC00339-203ENST00000420503 C6orf183Q5T699 404 aa9.85□□□□□ -0.83
LINC00339-203ENST00000420503 RPL22L1Q6P5R6 122 aaKnown RBP9.85□□□□□ -0.83
LINC00339-203ENST00000420503 JAGN1Q8N5M9 183 aa9.85□□□□□ -0.83
LINC00339-203ENST00000420503 ABHD5Q8WTS1 349 aa9.85□□□□□ -0.83
LINC00339-203ENST00000420503 MRPL48Q96GC5 212 aaKnown RBP9.85□□□□□ -0.83
LINC00339-203ENST00000420503 KCNK15Q9H427 330 aa9.85□□□□□ -0.83
LINC00339-203ENST00000420503 PLCXD1Q9NUJ7 323 aa9.85□□□□□ -0.83
LINC00339-203ENST00000420503 MBNL3Q9NUK0 354 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms