RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 TMPRSS2O15393 492 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 RAB5CP51148 216 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 ZNF672Q499Z4 452 aaPredicted RBP7.04□□□□□ -1.28
USP54-203ENST00000418501 CLLU1Q5K131 121 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 LINC01560Q8TB33 94 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 ACACAQ13085 2346 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 WISP2O76076 250 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 EPHA1P21709 976 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 LPAR6P43657 344 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 B2MP61769 119 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 ZNF714Q96N38 554 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 AQP10Q96PS8 301 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 PSG11Q9UQ72 335 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 KBTBD11-OT1A0A1B0GTJ5 212 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 LEUTXA8MZ59 168 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 ADAP1O75689 374 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 RPL31P62899 125 aaKnown RBP7.04□□□□□ -1.28
USP54-203ENST00000418501 RAB32Q13637 225 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 LY6DQ14210 128 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 SP6Q3SY56 376 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 DHRS7BQ6IAN0 325 aaPredicted RBP7.04□□□□□ -1.28
USP54-203ENST00000418501 C11orf53Q8IXP5 236 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 DMBX1Q8NFW5 382 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 GNPNAT1Q96EK6 184 aaPredicted RBP7.04□□□□□ -1.28
USP54-203ENST00000418501 C18orf12Q96KH6 178 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 TOLLIPQ9H0E2 274 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 FKBP11Q9NYL4 201 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 CLN8Q9UBY8 286 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 CEP250Q9BV73 2442 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 IGHV3OR15-7A0A075B7D8 119 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 SOX15O60248 233 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 HPRT1P00492 218 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 NFYBP25208 207 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 GLIPR1P48060 266 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 DCAF12L2Q5VW00 463 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 ZNF818PQ6ZRF7 136 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 BAP18Q8IXM2 172 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 SELENOHQ8IZQ5 122 aaKnown RBP7.04□□□□□ -1.28
USP54-203ENST00000418501 SPAG16Q8N0X2 631 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 OR1S2Q8NGQ3 325 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 OR1L1Q8NH94 360 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 CCL13Q99616 98 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 ABHD14AQ9BUJ0 271 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 SHARPINQ9H0F6 387 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 HIPK2Q9H2X6 1198 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 CRIM1Q9NZV1 1036 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 NUP50Q9UKX7 468 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 RNF150Q9ULK6 438 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 MMP24Q9Y5R2 645 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 LAMA2P24043 3122 aaKnown RBP7.03□□□□□ -1.28
USP54-203ENST00000418501 TNRC6AQ8NDV7 1962 aaKnown RBP7.03□□□□□ -1.28
USP54-203ENST00000418501 TMEM178BH3BS89 294 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 RBFOX2O43251 390 aaKnown RBP eCLIP7.03□□□□□ -1.28
USP54-203ENST00000418501 SPDEFO95238 335 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 FSTL3O95633 263 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 CYB5R3P00387 301 aaPredicted RBP7.03□□□□□ -1.28
USP54-203ENST00000418501 LHBP01229 141 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 GYPAP02724 150 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 MIDNQ504T8 468 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 SLC35G3Q8N808 338 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 KCNIP2Q9NS61 270 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 GAB2Q9UQC2 676 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 FAM90A9PA6NNJ1 464 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 DEDDO75618 318 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 GAPDHP04406 335 aaKnown RBP7.03□□□□□ -1.28
USP54-203ENST00000418501 THBDP07204 575 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 CCKARP32238 428 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 ZNF709Q8N972 641 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 OR10X1Q8NGY0 326 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 ST8SIA2Q92186 375 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 DOCK7Q96N67 2140 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 NKX2-6A6NCS4 301 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 M0R1X1 148 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 RPS2P15880 293 aaKnown RBP7.03□□□□□ -1.28
USP54-203ENST00000418501 RAB13P51153 203 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 ATP6V1FQ16864 119 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 LTC4SQ16873 150 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 STUMQ69YW2 141 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 ZNF788Q6ZQV5 615 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 CORO2AQ92828 525 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 BARX1Q9HBU1 254 aaPredicted RBP7.03□□□□□ -1.28
USP54-203ENST00000418501 GFOD1Q9NXC2 390 aa7.03□□□□□ -1.28
USP54-203ENST00000418501 RCL1Q9Y2P8 373 aaKnown RBP7.03□□□□□ -1.28
USP54-203ENST00000418501 STRAPQ9Y3F4 350 aaKnown RBP7.03□□□□□ -1.28
USP54-203ENST00000418501 CEBPZOSA8MTT3 80 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 F2RL2O00254 374 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 TNFSF12O43508 249 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 PRH1P02810 166 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 OMGP23515 440 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 CEBPDP49716 269 aaPredicted RBP7.02□□□□□ -1.29
USP54-203ENST00000418501 TAS2R30P59541 319 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 RAB11AP62491 216 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 CD177Q8N6Q3 437 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 VSTM2AQ8TAG5 236 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 GLYATL2Q8WU03 294 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 OR1A1Q9P1Q5 309 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 E7EQL1 145 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.02□□□□□ -1.29
USP54-203ENST00000418501 ZNF737O75373 536 aa7.02□□□□□ -1.29
USP54-203ENST00000418501 SUPT4H1P63272 117 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms