RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 H2BFMP0C1H6 154 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 CT62P0C5K7 136 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 NR2C1P13056 603 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 NQO2P16083 231 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 HIST1H1DP16402 221 aaKnown RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 FGF7P21781 194 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 GATA2P23769 480 aaPredicted RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 NFYBP25208 207 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 DRD3P35462 400 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 ZNF93P35789 620 aaPredicted RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 GPX4P36969 197 aaPredicted RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 CCR2P41597 374 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 ALDH3B1P43353 468 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 P2RY1P47900 373 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 CAMLGP49069 296 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 FHITP49789 147 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 DAP3P51398 398 aaKnown RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 P2RY4P51582 365 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 CCR4P51679 360 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 POLR2HP52434 150 aaKnown RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 ZNF133P52736 654 aaPredicted RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 EMP2P54851 167 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 CLDN6P56747 220 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 SLC26A5P58743 744 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 S100A10P60903 97 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 SPCS3P61009 180 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 SLC35A1P78382 337 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 QRFPP83859 136 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 H3F3AP84243 136 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 ACY1Q03154 408 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 SIGLEC14Q08ET2 396 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 FUT7Q11130 342 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 ZP4Q12836 540 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 SKP2Q13309 424 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 EBPQ15125 230 aaKnown RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 RSU1Q15404 277 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 CST6Q15828 149 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 SSX2Q16385 188 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 GUK1Q16774 197 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 PCK2Q16822 640 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 C14orf28Q4W4Y0 310 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 HIKESHIQ53FT3 197 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 SOHLH1Q5JUK2 328 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 ACER2Q5QJU3 275 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 MUC21Q5SSG8 566 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 RPL7L1Q6DKI1 246 aaKnown RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 ASPHD2Q6ICH7 369 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 OR52W1Q6IF63 320 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 HEPN1Q6WQI6 88 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 SLC35E3Q7Z769 313 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 MRPL52Q86TS9 123 aaKnown RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 BIVMQ86UB2 503 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 GKN2Q86XP6 184 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 SGPP2Q8IWX5 399 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 CSNK1A1LQ8N752 337 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 BCORP1Q8N888 145 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 ZNF615Q8N8J6 731 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 SUMF2Q8NBJ7 301 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 CHST4Q8NCG5 386 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 OR4D6Q8NGJ1 314 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 OR51A4Q8NGJ6 313 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 OR10G4Q8NGN3 311 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 OR10AC1Q8NH08 325 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 ZNF563Q8TA94 476 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 FLVCR1-AS1Q8TAF5 88 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 M1APQ8TC57 530 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 MARCH1Q8TCQ1 289 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 ZPLD1Q8TCW7 415 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 RNF133Q8WVZ7 376 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 FGF14Q92915 247 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 TOMM40LQ969M1 308 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 TMEM230Q96A57 120 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 NABP1Q96AH0 204 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 MRGPRFQ96AM1 343 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 FAM131CQ96AQ9 280 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 ZNF707Q96C28 371 aaPredicted RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 C10orf35Q96D05 121 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 MRPL38Q96DV4 380 aaKnown RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 RBMXL1Q96E39 390 aaKnown RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 GALNT14Q96FL9 552 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 CPNE2Q96FN4 548 aaPredicted RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 AKR1E2Q96JD6 320 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 BTF3L4Q96K17 158 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 YPEL4Q96NS1 127 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 GUCD1Q96NT3 240 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 C2orf88Q9BSF0 95 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 APOOQ9BUR5 198 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 RBM24Q9BX46 236 aaKnown RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 SUCNR1Q9BXA5 334 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 TBL1XR1Q9BZK7 514 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 OR11A1Q9GZK7 315 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 EIF5A2Q9GZV4 153 aaKnown RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 TMEM231Q9H6L2 316 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 SPACA1Q9HBV2 294 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 OR2S2Q9NQN1 319 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 SDHAF3Q9NRP4 125 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 C19orf12Q9NSK7 152 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 DEPPQ9NTK1 212 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 OR5AC2Q9NZP5 309 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms