RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 SLC25A38Q96DW6 304 aa14.33□□□□□ -0.12
VCP-202ENST00000417448 CMSS1Q9BQ75 279 aaKnown RBP14.33□□□□□ -0.12
VCP-202ENST00000417448 HSF4Q9ULV5 492 aa14.33□□□□□ -0.12
VCP-202ENST00000417448 METTL21EPA6NDL7 271 aa14.32□□□□□ -0.12
VCP-202ENST00000417448 C3orf84H3BNL1 204 aa14.32□□□□□ -0.12
VCP-202ENST00000417448 H3BUI4 141 aa14.32□□□□□ -0.12
VCP-202ENST00000417448 J3QR06 171 aa14.32□□□□□ -0.12
VCP-202ENST00000417448 CA11O75493 328 aa14.32□□□□□ -0.12
VCP-202ENST00000417448 IGLV1-47P01700 117 aa14.32□□□□□ -0.12
VCP-202ENST00000417448 CD24P25063 80 aa14.32□□□□□ -0.12
VCP-202ENST00000417448 DIAPH2-AS1Q14236 149 aa14.32□□□□□ -0.12
VCP-202ENST00000417448 AANATQ16613 207 aa14.32□□□□□ -0.12
VCP-202ENST00000417448 C6orf183Q5T699 404 aa14.32□□□□□ -0.12
VCP-202ENST00000417448 RBMXL1Q96E39 390 aaKnown RBP14.32□□□□□ -0.12
VCP-202ENST00000417448 MBNL3Q9NUK0 354 aaKnown RBP14.32□□□□□ -0.12
VCP-202ENST00000417448 RHBDL2Q9NX52 303 aa14.32□□□□□ -0.12
VCP-202ENST00000417448 GFOD1Q9NXC2 390 aa14.32□□□□□ -0.12
VCP-202ENST00000417448 GAR1Q9NY12 217 aaKnown RBP14.32□□□□□ -0.12
VCP-202ENST00000417448 KCNIP1Q9NZI2 227 aa14.32□□□□□ -0.12
VCP-202ENST00000417448 ZNF230Q9UIE0 474 aaPredicted RBP14.32□□□□□ -0.12
VCP-202ENST00000417448 U3KQK5 164 aa14.32□□□□□ -0.12
VCP-202ENST00000417448 F2RL2O00254 374 aa14.31□□□□□ -0.12
VCP-202ENST00000417448 SPINT2O43291 252 aa14.31□□□□□ -0.12
VCP-202ENST00000417448 GABARAPO95166 117 aa14.31□□□□□ -0.12
VCP-202ENST00000417448 HTR1DP28221 377 aa14.31□□□□□ -0.12
VCP-202ENST00000417448 CD34P28906 385 aa14.31□□□□□ -0.12
VCP-202ENST00000417448 PRRX1P54821 245 aa14.31□□□□□ -0.12
VCP-202ENST00000417448 HLA-DRB5Q30154 266 aa14.31□□□□□ -0.12
VCP-202ENST00000417448 CDNFQ49AH0 187 aa14.31□□□□□ -0.12
VCP-202ENST00000417448 LIAT1Q6ZQX7 453 aa14.31□□□□□ -0.12
VCP-202ENST00000417448 Q6ZS46 218 aa14.31□□□□□ -0.12
VCP-202ENST00000417448 OR9G1Q8NH87 305 aa14.31□□□□□ -0.12
VCP-202ENST00000417448 PTX4Q96A99 478 aa14.31□□□□□ -0.12
VCP-202ENST00000417448 RCC1LQ96I51 464 aaKnown RBP14.31□□□□□ -0.12
VCP-202ENST00000417448 TBL2Q9Y4P3 447 aaKnown RBP14.31□□□□□ -0.12
VCP-202ENST00000417448 CSMD3Q7Z407 3707 aa14.3□□□□□ -0.12
VCP-202ENST00000417448 A0A087X0M5 115 aa14.3□□□□□ -0.12
VCP-202ENST00000417448 A0A1B0GX30 115 aa14.3□□□□□ -0.12
VCP-202ENST00000417448 BUB1B-PAK6H3BSN5 160 aa14.3□□□□□ -0.12
VCP-202ENST00000417448 MFNGO00587 321 aa14.3□□□□□ -0.12
VCP-202ENST00000417448 CD3GP09693 182 aa14.3□□□□□ -0.12
VCP-202ENST00000417448 PF4V1P10720 104 aa14.3□□□□□ -0.12
VCP-202ENST00000417448 PTHLHP12272 177 aa14.3□□□□□ -0.12
VCP-202ENST00000417448 HIST1H1DP16402 221 aaKnown RBP14.3□□□□□ -0.12
VCP-202ENST00000417448 PPP1CCP36873 323 aaKnown RBP14.3□□□□□ -0.12
VCP-202ENST00000417448 ZNF134P52741 427 aa14.3□□□□□ -0.12
VCP-202ENST00000417448 CD83Q01151 205 aa14.3□□□□□ -0.12
VCP-202ENST00000417448 MADCAM1Q13477 382 aa14.3□□□□□ -0.12
VCP-202ENST00000417448 SPCS2Q15005 226 aa14.3□□□□□ -0.12
VCP-202ENST00000417448 TMEM95Q3KNT9 176 aa14.3□□□□□ -0.12
VCP-202ENST00000417448 ZNF880Q6PDB4 577 aa14.3□□□□□ -0.12
VCP-202ENST00000417448 IL1F10Q8WWZ1 152 aa14.3□□□□□ -0.12
VCP-202ENST00000417448 SLC25A46Q96AG3 418 aa14.3□□□□□ -0.12
VCP-202ENST00000417448 MALSU1Q96EH3 234 aa14.3□□□□□ -0.12
VCP-202ENST00000417448 GNG12Q9UBI6 72 aa14.3□□□□□ -0.12
VCP-202ENST00000417448 LY6LH3BQJ8 138 aa14.29□□□□□ -0.12
VCP-202ENST00000417448 SCTP09683 121 aa14.29□□□□□ -0.12
VCP-202ENST00000417448 RANBP1P43487 201 aa14.29□□□□□ -0.12
VCP-202ENST00000417448 RPL5P46777 297 aaKnown RBP14.29□□□□□ -0.12
VCP-202ENST00000417448 ARFRP1Q13795 201 aa14.29□□□□□ -0.12
VCP-202ENST00000417448 HMGN3Q15651 99 aa14.29□□□□□ -0.12
VCP-202ENST00000417448 OR10A7Q8NGE5 316 aa14.29□□□□□ -0.12
VCP-202ENST00000417448 ZNF596Q8TC21 504 aa14.29□□□□□ -0.12
VCP-202ENST00000417448 PARP12Q9H0J9 701 aaKnown RBP14.29□□□□□ -0.12
VCP-202ENST00000417448 DCSTAMPQ9H295 470 aa14.29□□□□□ -0.12
VCP-202ENST00000417448 Q9N2K0 584 aa14.29□□□□□ -0.12
VCP-202ENST00000417448 OR2S2Q9NQN1 319 aa14.29□□□□□ -0.12
VCP-202ENST00000417448 DPM3Q9P2X0 92 aa14.29□□□□□ -0.12
VCP-202ENST00000417448 HUWE1Q7Z6Z7 4374 aaKnown RBP14.29□□□□□ -0.12
VCP-202ENST00000417448 TRAV18A0A075B6X5 111 aa14.28□□□□□ -0.12
VCP-202ENST00000417448 TMEM235A6NFC5 223 aa14.28□□□□□ -0.12
VCP-202ENST00000417448 REG1BP48304 166 aa14.28□□□□□ -0.12
VCP-202ENST00000417448 CT45A1Q5HYN5 189 aa14.28□□□□□ -0.12
VCP-202ENST00000417448 TPTE2P1Q5T6R2 138 aa14.28□□□□□ -0.12
VCP-202ENST00000417448 MINOS1Q5TGZ0 78 aa14.28□□□□□ -0.12
VCP-202ENST00000417448 TRAT1Q6PIZ9 186 aa14.28□□□□□ -0.12
VCP-202ENST00000417448 TMEM219Q86XT9 240 aa14.28□□□□□ -0.12
VCP-202ENST00000417448 SAMD12Q8N8I0 201 aa14.28□□□□□ -0.12
VCP-202ENST00000417448 CT45A3Q8NHU0 189 aa14.28□□□□□ -0.12
VCP-202ENST00000417448 NUDCD2Q8WVJ2 157 aa14.28□□□□□ -0.12
VCP-202ENST00000417448 C12orf4Q9NQ89 552 aa14.28□□□□□ -0.12
VCP-202ENST00000417448 OR1A1Q9P1Q5 309 aa14.28□□□□□ -0.12
VCP-202ENST00000417448 COMMD3Q9UBI1 195 aa14.28□□□□□ -0.12
VCP-202ENST00000417448 SPATA2Q9UM82 520 aa14.28□□□□□ -0.12
VCP-202ENST00000417448 MINOS1-NBL1R4GNA1 71 aa14.28□□□□□ -0.12
VCP-202ENST00000417448 IGKV1D-8A0A087WSZ0 117 aa14.27□□□□□ -0.13
VCP-202ENST00000417448 TRBV6-6A0A0A6YYG2 114 aa14.27□□□□□ -0.13
VCP-202ENST00000417448 LEUTXA8MZ59 168 aa14.27□□□□□ -0.13
VCP-202ENST00000417448 PF4P02776 101 aa14.27□□□□□ -0.13
VCP-202ENST00000417448 FCER2P06734 321 aa14.27□□□□□ -0.13
VCP-202ENST00000417448 HLA-DRB3P79483 266 aa14.27□□□□□ -0.13
VCP-202ENST00000417448 ZNF260Q3ZCT1 412 aa14.27□□□□□ -0.13
VCP-202ENST00000417448 MORN2Q502X0 79 aa14.27□□□□□ -0.13
VCP-202ENST00000417448 TCTEX1D4Q5JR98 221 aa14.27□□□□□ -0.13
VCP-202ENST00000417448 CASC10Q5T4H9 136 aa14.27□□□□□ -0.13
VCP-202ENST00000417448 ZNF439Q8NDP4 499 aa14.27□□□□□ -0.13
VCP-202ENST00000417448 OR52M1Q8NGK5 317 aa14.27□□□□□ -0.13
VCP-202ENST00000417448 OR10X1Q8NGY0 326 aa14.27□□□□□ -0.13
VCP-202ENST00000417448 ABRACLQ9P1F3 81 aa14.27□□□□□ -0.13
VCP-202ENST00000417448 SCOCQ9UIL1 159 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms