RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 TRAV38-1A0A0B4J264 116 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 IGHV1-69DA0A0B4J2H0 117 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 A0A0J9YXV3 536 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 LOC389332A0A1B0GUA5 103 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 TMEM269A0A1B0GVZ9 245 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 LINC01548A6NM66 108 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 FABP5P3A8MUU1 101 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 C9JAW5 83 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 SLC37A4O43826 429 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 OR7C2O60412 319 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 SNAP91O60641 907 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 SS18L1O75177 396 aaPredicted RBP2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 TRBV12-3P01733 135 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 OPN1SWP03999 348 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 CSN2P05814 226 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 ADRA2AP08913 450 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 SMIM17P0DL12 118 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 SCGB1C2P0DMR2 95 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 LAMP1P11279 417 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 IGLL1P15814 213 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 MUC1P15941 1255 aaPredicted RBP2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 RPL7P18124 248 aaKnown RBP2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 IL1RNP18510 177 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 IGHV1-2P23083 117 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 PPP1CCP36873 323 aaKnown RBP2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 NCBP2P52298 156 aaKnown RBP eCLIP2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 SYNJ2BPP57105 145 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 UBE2NP61088 152 aaKnown RBP2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 HBA1P69905 142 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 CYCSP99999 105 aaKnown RBP2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 HIST1H1AQ02539 215 aaPredicted RBP2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 GNA12Q03113 381 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 PNOCQ13519 176 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 FZD2Q14332 565 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 SLC10A1Q14973 349 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 MMDQ15546 238 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 SRSF7Q16629 238 aaKnown RBP eCLIP2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 KIAA1644Q3SXP7 199 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 FBXL19-AS1Q494R0 122 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 C1orf100Q5SVJ3 147 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 FAM222AQ5U5X8 452 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 TMEM236Q5W0B7 351 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 PRSS54Q6PEW0 395 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 SCIMPQ6UWF3 145 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 SBSNQ6UWP8 590 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 IGFL2Q6UWQ7 119 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 RNF165Q6ZSG1 346 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 Q6ZSR6 202 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 VN1R4Q7Z5H5 301 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 PTAR1Q7Z6K3 402 aaPredicted RBP2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 GGNQ86UU5 652 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 C17orf82Q86X59 251 aaPredicted RBP2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 PRIMA1Q86XR5 153 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 TCTEX1D1Q8N7M0 179 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 C11orf72Q8NBR9 251 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 LY6G5BQ8NDX9 201 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 OR10AD1Q8NGE0 317 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 OR5A2Q8NGI9 324 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 OR5W2Q8NH69 310 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 FLVCR1-AS1Q8TAF5 88 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 SCGB1C1Q8TD33 95 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 VN1R17PQ8TDU5 208 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 RXFP4Q8TDU9 374 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 ZNF418Q8TF45 676 aaPredicted RBP2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 RNF185Q96GF1 192 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 TMEM101Q96IK0 257 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 FCRL1Q96LA6 429 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 TSPAN32Q96QS1 320 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 NMNAT3Q96T66 252 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 NDFIP1Q9BT67 221 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 GABARAPL3Q9BY60 117 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 SAMD10Q9BYL1 202 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 OR2H1Q9GZK4 316 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 TMPRSS5Q9H3S3 457 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 EDA2RQ9HAV5 297 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 CACYBPQ9HB71 228 aaKnown RBP2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 RBFOX1Q9NWB1 397 aaKnown RBP2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 OCIAD1Q9NX40 245 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 LINC00527Q9UJ94 153 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 HIGD1AQ9Y241 93 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 POMPQ9Y244 141 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 HS3ST2Q9Y278 367 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 MED31Q9Y3C7 131 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 INSL5Q9Y5Q6 135 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 PXMP4Q9Y6I8 212 aa2.46□□□□□ -2.02
CTDSPL-203ENST00000416688 TCOF1Q13428 1488 aaKnown RBP2.45□□□□□ -2.02
CTDSPL-203ENST00000416688 NALCNQ8IZF0 1738 aa2.45□□□□□ -2.02
CTDSPL-203ENST00000416688 MTCL1Q9Y4B5 1905 aaKnown RBP2.45□□□□□ -2.02
CTDSPL-203ENST00000416688 TRBV19A0A075B6N1 114 aa2.45□□□□□ -2.02
CTDSPL-203ENST00000416688 IGHV4-4A0A075B6R2 117 aa2.45□□□□□ -2.02
CTDSPL-203ENST00000416688 IGHV1OR15-1A0A075B7D0 117 aa2.45□□□□□ -2.02
CTDSPL-203ENST00000416688 IGHV3-38A0A0C4DH36 116 aa2.45□□□□□ -2.02
CTDSPL-203ENST00000416688 IGHV1-69-2A0A0G2JMI3 117 aa2.45□□□□□ -2.02
CTDSPL-203ENST00000416688 TMEM218A2RU14 115 aa2.45□□□□□ -2.02
CTDSPL-203ENST00000416688 MEIS3P1A6NDR6 274 aa2.45□□□□□ -2.02
CTDSPL-203ENST00000416688 GSTZ1O43708 216 aaPredicted RBP2.45□□□□□ -2.02
CTDSPL-203ENST00000416688 RAMP2O60895 175 aa2.45□□□□□ -2.02
CTDSPL-203ENST00000416688 DPM2O94777 84 aa2.45□□□□□ -2.02
CTDSPL-203ENST00000416688 DUS4LO95620 317 aaKnown RBP2.45□□□□□ -2.02
CTDSPL-203ENST00000416688 ZNF682O95780 498 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms