RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 FADS1O60427 444 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 NPIPB7O75200 414 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 DUSP14O95147 198 aaKnown RBP1.92□□□□□ -2.1
MCF2-204ENST00000414978 ERGP11308 486 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 HCCSP53701 268 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 CLDN12P56749 244 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 MTPNP58546 118 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 PAX8Q06710 450 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 KIAA0087Q14695 138 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 POU2AF1Q16633 256 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 LRRC36Q1X8D7 754 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 PAN3Q58A45 887 aaKnown RBP1.92□□□□□ -2.1
MCF2-204ENST00000414978 OR10J3Q5JRS4 329 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 C1orf100Q5SVJ3 147 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 CPTPQ5TA50 214 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 UNQ9370/PRO34162Q6UXP9 181 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 ZNF786Q8N393 782 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 OR8J3Q8NGG0 315 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 HAVCR2Q8TDQ0 301 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 LCN9Q8WX39 176 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 GHSRQ92847 366 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 RERGQ96A58 199 aaPredicted RBP1.92□□□□□ -2.1
MCF2-204ENST00000414978 PPWD1Q96BP3 646 aaKnown RBP1.92□□□□□ -2.1
MCF2-204ENST00000414978 PIK3IP1Q96FE7 263 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 PDXPQ96GD0 296 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 FCRL1Q96LA6 429 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 SDHCQ99643 169 aaPredicted RBP1.92□□□□□ -2.1
MCF2-204ENST00000414978 C20orf144Q9BQM9 153 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 ULBP3Q9BZM4 244 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 C12orf10Q9HB07 376 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 CMTM6Q9NX76 183 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 ENOPH1Q9UHY7 261 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 VSIG4Q9Y279 399 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 KLF12Q9Y4X4 402 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 AP4S1Q9Y587 144 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 MGAQ8IWI9 3026 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 UNC13CQ8NB66 2214 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 IGHV1OR15-1A0A075B7D0 117 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 TRAV17A0A0B4J275 112 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 DHRS12A0PJE2 317 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 EVPLLA8MZ36 301 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 UGT2B7P16662 529 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 M6PRP20645 277 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 CMPK1P30085 196 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 GDI2P50395 445 aaKnown RBP1.92□□□□□ -2.1
MCF2-204ENST00000414978 HNRNPA3P51991 378 aaKnown RBP1.92□□□□□ -2.1
MCF2-204ENST00000414978 REEP5Q00765 189 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 DEFA6Q01524 100 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 PRSS8Q16651 343 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 GUCA2BQ16661 112 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 HBMQ6B0K9 141 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 IZUMO2Q6UXV1 221 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 COMMD6Q7Z4G1 85 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 OR4E2Q8NGC2 313 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 ENKURQ8TC29 256 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 PPCDCQ96CD2 204 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 ZNF184Q99676 751 aaPredicted RBP1.92□□□□□ -2.1
MCF2-204ENST00000414978 C19orf24Q9BVV8 132 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 PLA2G12AQ9BZM1 189 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 PLEKHF2Q9H8W4 249 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 TRIM45Q9H8W5 580 aaPredicted RBP1.92□□□□□ -2.1
MCF2-204ENST00000414978 VAPAQ9P0L0 249 aa1.92□□□□□ -2.1
MCF2-204ENST00000414978 IGLV1-36A0A0B4J1U3 117 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 TCRBV3S1A0A5B6 114 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 NDUFAF8A1L188 74 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 H7C2Y5 167 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 CPSF4O95639 269 aaKnown RBP1.91□□□□□ -2.1
MCF2-204ENST00000414978 PVALBP20472 110 aaPredicted RBP1.91□□□□□ -2.1
MCF2-204ENST00000414978 PPIBP23284 216 aaKnown RBP1.91□□□□□ -2.1
MCF2-204ENST00000414978 GABRA4P48169 554 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 PRR3P79522 188 aaKnown RBP1.91□□□□□ -2.1
MCF2-204ENST00000414978 PRDX1Q06830 199 aaKnown RBP1.91□□□□□ -2.1
MCF2-204ENST00000414978 MED21Q13503 144 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 LPCAT4Q643R3 524 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 GLYATQ6IB77 296 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 LCN8Q6JVE9 175 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 DNM1P46Q6ZS02 220 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 LINC00337Q8N6G1 96 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 ZNF676Q8N7Q3 588 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 LINC01555Q8NAE3 123 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 ZNF738Q8NE65 137 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 OR10A6Q8NH74 314 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 CCL4L1Q8NHW4 92 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 SRSF12Q8WXF0 261 aaKnown RBP1.91□□□□□ -2.1
MCF2-204ENST00000414978 TMEM190Q8WZ59 177 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 TMEM230Q96A57 120 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 TM4SF18Q96CE8 201 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 Q9H521 79 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 TAS2R9Q9NYW1 312 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 TRAPPC4Q9Y296 219 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 FLVCR1Q9Y5Y0 555 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 V9GYQ6 96 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 WDFY3Q8IZQ1 3526 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 CELSR2Q9HCU4 2923 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 SPENQ96T58 3664 aaKnown RBP1.91□□□□□ -2.1
MCF2-204ENST00000414978 POLQO75417 2590 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 KIAA1549Q9HCM3 1950 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 CENPBD1B2RD01 187 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 TXNDC9O14530 226 aa1.91□□□□□ -2.1
MCF2-204ENST00000414978 TPST1O60507 370 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms