RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 E9PLN8 166 aa10.28□□□□□ -0.76
PTPRF-205ENST00000414879 J3QR06 171 aa10.28□□□□□ -0.76
PTPRF-205ENST00000414879 NUPL2O15504 423 aaKnown RBP10.28□□□□□ -0.76
PTPRF-205ENST00000414879 MELTFP08582 738 aa10.28□□□□□ -0.76
PTPRF-205ENST00000414879 P2RX3P56373 397 aa10.28□□□□□ -0.76
PTPRF-205ENST00000414879 UBE2V2Q15819 145 aa10.28□□□□□ -0.76
PTPRF-205ENST00000414879 LSM10Q969L4 123 aaKnown RBP10.28□□□□□ -0.76
PTPRF-205ENST00000414879 VKORC1Q9BQB6 163 aa10.28□□□□□ -0.76
PTPRF-205ENST00000414879 VSIG4Q9Y279 399 aa10.28□□□□□ -0.76
PTPRF-205ENST00000414879 PITX3O75364 302 aa10.27□□□□□ -0.76
PTPRF-205ENST00000414879 TMEM241Q24JQ0 296 aa10.27□□□□□ -0.76
PTPRF-205ENST00000414879 MUC15Q8N387 334 aa10.27□□□□□ -0.76
PTPRF-205ENST00000414879 PCNPQ8WW12 178 aaKnown RBP10.27□□□□□ -0.76
PTPRF-205ENST00000414879 GTF3AQ92664 365 aaKnown RBP10.27□□□□□ -0.76
PTPRF-205ENST00000414879 MRGPRFQ96AM1 343 aa10.27□□□□□ -0.76
PTPRF-205ENST00000414879 OR1A1Q9P1Q5 309 aa10.27□□□□□ -0.76
PTPRF-205ENST00000414879 IGHV1-69-2A0A0G2JMI3 117 aa10.27□□□□□ -0.77
PTPRF-205ENST00000414879 IQCF6A8MYZ5 107 aa10.27□□□□□ -0.77
PTPRF-205ENST00000414879 SMPD2O60906 423 aa10.27□□□□□ -0.77
PTPRF-205ENST00000414879 CD40P25942 277 aa10.27□□□□□ -0.77
PTPRF-205ENST00000414879 DYNLT3P51808 116 aa10.27□□□□□ -0.77
PTPRF-205ENST00000414879 MEF2CQ06413 473 aaPredicted RBP10.27□□□□□ -0.77
PTPRF-205ENST00000414879 PEAR1Q5VY43 1037 aaPredicted RBP10.27□□□□□ -0.77
PTPRF-205ENST00000414879 TEPPQ6URK8 271 aa10.27□□□□□ -0.77
PTPRF-205ENST00000414879 ANGPTL6Q8NI99 470 aa10.27□□□□□ -0.77
PTPRF-205ENST00000414879 TIMP3P35625 211 aa10.27□□□□□ -0.77
PTPRF-205ENST00000414879 PPP1CCP36873 323 aaKnown RBP10.27□□□□□ -0.77
PTPRF-205ENST00000414879 EWSR1Q01844 656 aaKnown RBP eCLIP10.27□□□□□ -0.77
PTPRF-205ENST00000414879 ARTNQ5T4W7 220 aa10.27□□□□□ -0.77
PTPRF-205ENST00000414879 POC1AQ8NBT0 407 aa10.27□□□□□ -0.77
PTPRF-205ENST00000414879 BSCL2Q96G97 398 aaPredicted RBP10.27□□□□□ -0.77
PTPRF-205ENST00000414879 B4DEV8 164 aa10.27□□□□□ -0.77
PTPRF-205ENST00000414879 MFNGO00587 321 aa10.27□□□□□ -0.77
PTPRF-205ENST00000414879 NEURL1O76050 574 aa10.27□□□□□ -0.77
PTPRF-205ENST00000414879 LIPFP07098 398 aa10.27□□□□□ -0.77
PTPRF-205ENST00000414879 CCL1P22362 96 aa10.27□□□□□ -0.77
PTPRF-205ENST00000414879 KIAA0141Q14154 515 aaPredicted RBP10.27□□□□□ -0.77
PTPRF-205ENST00000414879 ZNF429Q86V71 674 aa10.27□□□□□ -0.77
PTPRF-205ENST00000414879 OR1L1Q8NH94 360 aa10.27□□□□□ -0.77
PTPRF-205ENST00000414879 IGHV3OR15-7A0A075B7D8 119 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 NKX2-6A6NCS4 301 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 GDF9O60383 454 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 GYPAP02724 150 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 RPL35P42766 123 aaKnown RBP10.26□□□□□ -0.77
PTPRF-205ENST00000414879 TREM2Q9NZC2 230 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 ZNF737O75373 536 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 FAM87AP0C7U9 286 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 CTRB1P17538 263 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 USF1P22415 310 aaPredicted RBP10.26□□□□□ -0.77
PTPRF-205ENST00000414879 RPL27AP46776 148 aaKnown RBP10.26□□□□□ -0.77
PTPRF-205ENST00000414879 GFRA1P56159 465 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 CTRB2Q6GPI1 263 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 BMPERQ8N8U9 685 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 MEGF10Q96KG7 1140 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 NRIP2Q9BQI9 281 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 TPPP3Q9BW30 176 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 OR51B2Q9Y5P1 312 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 PSG2P11465 335 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 MMDQ15546 238 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 LYZL2Q7Z4W2 148 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 OR10A7Q8NGE5 316 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 CTDSP1Q9GZU7 261 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 PARP11Q9NR21 331 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 PLSCR2Q9NRY7 297 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 RALYQ9UKM9 306 aaKnown RBP10.26□□□□□ -0.77
PTPRF-205ENST00000414879 TNFSF18Q9UNG2 199 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 CLDN34H7C241 214 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 HPXP02790 462 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 CECR9P0C854 216 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 OVCH2Q7RTZ1 564 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 PDPNQ86YL7 162 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 ZNF488Q96MN9 340 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 NPVFQ9HCQ7 196 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 COA4Q9NYJ1 87 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 NEUROG3Q9Y4Z2 214 aa10.26□□□□□ -0.77
PTPRF-205ENST00000414879 LTBP2Q14767 1821 aa10.25□□□□□ -0.77
PTPRF-205ENST00000414879 HTR1DP28221 377 aa10.25□□□□□ -0.77
PTPRF-205ENST00000414879 RNFT1Q5M7Z0 435 aa10.25□□□□□ -0.77
PTPRF-205ENST00000414879 GLRX5Q86SX6 157 aa10.25□□□□□ -0.77
PTPRF-205ENST00000414879 ASCC3Q8N3C0 2202 aaKnown RBP10.25□□□□□ -0.77
PTPRF-205ENST00000414879 CTXND1A0A1B0GTU2 59 aa10.25□□□□□ -0.77
PTPRF-205ENST00000414879 SLC25A5P05141 298 aaKnown RBP10.25□□□□□ -0.77
PTPRF-205ENST00000414879 OR5I1Q13606 314 aa10.25□□□□□ -0.77
PTPRF-205ENST00000414879 PCSK4Q6UW60 755 aa10.25□□□□□ -0.77
PTPRF-205ENST00000414879 RTN4RL2Q86UN3 420 aa10.25□□□□□ -0.77
PTPRF-205ENST00000414879 MS4A7Q9GZW8 240 aaPredicted RBP10.25□□□□□ -0.77
PTPRF-205ENST00000414879 TMEM8BA6NDV4 472 aa10.25□□□□□ -0.77
PTPRF-205ENST00000414879 ZNF716A6NP11 495 aa10.25□□□□□ -0.77
PTPRF-205ENST00000414879 PDE6DO43924 150 aa10.25□□□□□ -0.77
PTPRF-205ENST00000414879 SFTA3P0C7M3 94 aa10.25□□□□□ -0.77
PTPRF-205ENST00000414879 KHDC3LQ587J8 217 aa10.25□□□□□ -0.77
PTPRF-205ENST00000414879 IGHV2OR16-5A0A0B4J2B6 119 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 CELA3AP09093 270 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 SLC35B1P78383 322 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 DNM1P46Q6ZS02 220 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 ADAD2Q8NCV1 583 aaKnown RBP10.24□□□□□ -0.77
PTPRF-205ENST00000414879 SLC24A4Q8NFF2 622 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 THADAQ6YHU6 1953 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 G3V3Q6 166 aa10.24□□□□□ -0.77
PTPRF-205ENST00000414879 RAB5AP20339 215 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms