RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 ARV1Q9H2C2 271 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 KCNIP1Q9NZI2 227 aa12.88□□□□□ -0.35
LRCH3-202ENST00000414675 WNT2P09544 360 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 EPHA1P21709 976 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 S100GP29377 79 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 GABRA2P47869 451 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 SULT1A2P50226 295 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 KLF3P57682 345 aaPredicted RBP12.87□□□□□ -0.35
LRCH3-202ENST00000414675 EWSR1Q01844 656 aaKnown RBP eCLIP12.87□□□□□ -0.35
LRCH3-202ENST00000414675 ID3Q02535 119 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 C3orf36Q3SXR2 165 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 ODF3L1Q8IXM7 274 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 OR13A1Q8NGR1 328 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 OR2V2Q96R30 315 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 UQCC1Q9NVA1 299 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 SH3BGRL2Q9UJC5 107 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 IGKV1D-17A0A075B6S4 117 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 IGHV3OR15-7A0A075B7D8 119 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 SRRM5B3KS81 715 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 IFNL4K9M1U5 179 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 SPRY3O43610 288 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 SERPINE2P07093 398 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 SWI5Q1ZZU3 235 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 ZNF585BQ52M93 769 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 KRBOX4Q5JUW0 171 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 Q6ZRM9 215 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 OR2C3Q8N628 320 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 GCSAMQ8N6F7 178 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 AKR1E2Q96JD6 320 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 RNF150Q9ULK6 438 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 FAM96BQ9Y3D0 163 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 ROS1P08922 2347 aa12.87□□□□□ -0.35
LRCH3-202ENST00000414675 IGLV3-9A0A075B6K5 115 aa12.86□□□□□ -0.35
LRCH3-202ENST00000414675 OOEPA6NGQ2 149 aa12.86□□□□□ -0.35
LRCH3-202ENST00000414675 DSCAMO60469 2012 aa12.86□□□□□ -0.35
LRCH3-202ENST00000414675 IGF2RP11717 2491 aa12.86□□□□□ -0.35
LRCH3-202ENST00000414675 CTRB1P17538 263 aa12.86□□□□□ -0.35
LRCH3-202ENST00000414675 PRDX2P32119 198 aa12.86□□□□□ -0.35
LRCH3-202ENST00000414675 SSTR5P35346 364 aa12.86□□□□□ -0.35
LRCH3-202ENST00000414675 ID4P47928 161 aa12.86□□□□□ -0.35
LRCH3-202ENST00000414675 CAV2P51636 162 aa12.86□□□□□ -0.35
LRCH3-202ENST00000414675 CTRB2Q6GPI1 263 aa12.86□□□□□ -0.35
LRCH3-202ENST00000414675 SPAG16Q8N0X2 631 aa12.86□□□□□ -0.35
LRCH3-202ENST00000414675 GALMQ96C23 342 aa12.86□□□□□ -0.35
LRCH3-202ENST00000414675 MEGF10Q96KG7 1140 aa12.86□□□□□ -0.35
LRCH3-202ENST00000414675 MRPL37Q9BZE1 423 aaKnown RBP12.86□□□□□ -0.35
LRCH3-202ENST00000414675 CARHSP1Q9Y2V2 147 aaKnown RBP12.86□□□□□ -0.35
LRCH3-202ENST00000414675 BORCS7-ASMTA0A0B4J1R7 106 aa12.86□□□□□ -0.35
LRCH3-202ENST00000414675 K7ENP7 123 aa12.86□□□□□ -0.35
LRCH3-202ENST00000414675 PRRG2O14669 202 aa12.86□□□□□ -0.35
LRCH3-202ENST00000414675 PITX3O75364 302 aa12.86□□□□□ -0.35
LRCH3-202ENST00000414675 ZNF737O75373 536 aa12.86□□□□□ -0.35
LRCH3-202ENST00000414675 IGKV1-5P01602 117 aa12.86□□□□□ -0.35
LRCH3-202ENST00000414675 ZNF16P17020 682 aaPredicted RBP12.86□□□□□ -0.35
LRCH3-202ENST00000414675 IL2RGP31785 369 aa12.86□□□□□ -0.35
LRCH3-202ENST00000414675 MOGAT3Q86VF5 341 aa12.86□□□□□ -0.35
LRCH3-202ENST00000414675 SEC11CQ9BY50 192 aa12.86□□□□□ -0.35
LRCH3-202ENST00000414675 KIAA1324LA8MWY0 1029 aaPredicted RBP12.85□□□□□ -0.35
LRCH3-202ENST00000414675 TSPAN9O75954 239 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 SNAPINO95295 136 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 MUC1P15941 1255 aaPredicted RBP12.85□□□□□ -0.35
LRCH3-202ENST00000414675 PPP1CCP36873 323 aaKnown RBP12.85□□□□□ -0.35
LRCH3-202ENST00000414675 MZT1Q08AG7 82 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 C10orf91Q5T1B1 145 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 TMEM88Q6PEY1 159 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 GFRALQ6UXV0 394 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 Q6ZRG5 221 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 ZNF295-AS1Q8N0V1 137 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 ITLN1Q8WWA0 313 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 SH3BGRL3Q9H299 93 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 PRELID1Q9Y255 219 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 RNF115Q9Y4L5 304 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 AGPAT2O15120 278 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 CHST1O43916 411 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 OMGP23515 440 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 CD40P25942 277 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 PAX9P55771 341 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 EDDM3AQ14507 147 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 FAM201AQ5SY85 155 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 TMEM252Q8N6L7 170 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 OR10Z1Q8NGY1 313 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 RFESDQ8TAC1 157 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 ABHD14BQ96IU4 210 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 GINS3Q9BRX5 216 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 PARP11Q9NR21 331 aa12.85□□□□□ -0.35
LRCH3-202ENST00000414675 LYRM2Q9NU23 88 aaPredicted RBP12.85□□□□□ -0.35
LRCH3-202ENST00000414675 IGHV3-43A0A0B4J1X8 118 aa12.84□□□□□ -0.35
LRCH3-202ENST00000414675 IGHV3-43DP0DP04 118 aa12.84□□□□□ -0.35
LRCH3-202ENST00000414675 F2RL1P55085 397 aa12.84□□□□□ -0.35
LRCH3-202ENST00000414675 SNRNP40Q96DI7 357 aaKnown RBP12.84□□□□□ -0.35
LRCH3-202ENST00000414675 AIFM2Q9BRQ8 373 aa12.84□□□□□ -0.35
LRCH3-202ENST00000414675 OR2D2Q9H210 308 aa12.84□□□□□ -0.35
LRCH3-202ENST00000414675 FAM212BQ9NTI7 297 aaPredicted RBP12.84□□□□□ -0.35
LRCH3-202ENST00000414675 RNASEK-C17orf49H0YIS7 233 aa12.83□□□□□ -0.35
LRCH3-202ENST00000414675 C15orf65H3BRN8 121 aa12.83□□□□□ -0.35
LRCH3-202ENST00000414675 F12P00748 615 aaPredicted RBP12.83□□□□□ -0.35
LRCH3-202ENST00000414675 PVALBP20472 110 aaPredicted RBP12.83□□□□□ -0.35
LRCH3-202ENST00000414675 CFHR2P36980 270 aa12.83□□□□□ -0.35
LRCH3-202ENST00000414675 RPL30P62888 115 aaKnown RBP12.83□□□□□ -0.35
LRCH3-202ENST00000414675 CLINT1Q14677 625 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms