RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 H0YJW9 148 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 TNFRSF10CO14798 259 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 HMGB3O15347 200 aaKnown RBP4.46□□□□□ -1.7
HERC4-205ENST00000412272 DHHO43323 396 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 LYPD3O95274 346 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 TACSTD2P09758 323 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 IGLL1P15814 213 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 HMGA1P17096 107 aaKnown RBP4.46□□□□□ -1.7
HERC4-205ENST00000412272 SRIP30626 198 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 ADMP35318 185 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 ZNF93P35789 620 aaPredicted RBP4.46□□□□□ -1.7
HERC4-205ENST00000412272 UQCRFS1P47985 274 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 C12orf54Q6X4T0 127 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 DGAT2Q96PD7 388 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 ST20Q9HBF5 79 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 ZNF736B4DX44 427 aaPredicted RBP4.46□□□□□ -1.7
HERC4-205ENST00000412272 E9PLN8 166 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 SLC17A2O00624 439 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 AMY2AP04746 511 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 GPX1P07203 203 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 ZNF28P17035 718 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 FSTP19883 344 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 HOXD9P28356 352 aaPredicted RBP4.46□□□□□ -1.7
HERC4-205ENST00000412272 GALR1P47211 349 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 SLC16A1P53985 500 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 ZNF121P58317 390 aaPredicted RBP4.46□□□□□ -1.7
HERC4-205ENST00000412272 RELBQ01201 579 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 IL11RAQ14626 422 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 RBPMS2Q6ZRY4 209 aaKnown RBP4.46□□□□□ -1.7
HERC4-205ENST00000412272 LCNL1Q6ZST4 164 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 LINC01555Q8NAE3 123 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 CLDND2Q8NHS1 167 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 RBMXL1Q96E39 390 aaKnown RBP4.46□□□□□ -1.7
HERC4-205ENST00000412272 NEIL1Q96FI4 390 aaPredicted RBP4.46□□□□□ -1.7
HERC4-205ENST00000412272 PECRQ9BY49 303 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 SH3BGRL3Q9H299 93 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 NKX2-4Q9H2Z4 354 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 DPRXA6NFQ7 191 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 SLC22A20A6NK97 555 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 TMPRSS2O15393 492 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 ZNF253O75346 499 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 THBDP07204 575 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 IRF1P10914 325 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 KIR2DL2P43627 348 aaPredicted RBP4.45□□□□□ -1.7
HERC4-205ENST00000412272 ZNF117Q03924 483 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 RUNX3Q13761 415 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 PSG5Q15238 335 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 VAX1Q5SQQ9 334 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 MRPL54Q6P161 138 aaKnown RBP4.45□□□□□ -1.7
HERC4-205ENST00000412272 SPATA12Q7Z6I5 190 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 OR2G3Q8NGZ4 309 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 SSC4DQ8WTU2 575 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 FGF13Q92913 245 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 LRRC3BQ96PB8 259 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 C16orf70Q9BSU1 422 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 ST6GALNAC5Q9BVH7 336 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 MCTS1Q9ULC4 181 aaKnown RBP4.45□□□□□ -1.7
HERC4-205ENST00000412272 TRAV9-2A0A087WT02 112 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 CENPVL1A0A0U1RR11 272 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 A0A1W2PPK0 400 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 A0A1W2PPV9 198 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 GRIFINA4D1Z8 144 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 J3QLI3 93 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 J3QR89 54 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 ZNF708P17019 499 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 VDAC1P21796 283 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 CCKBRP32239 447 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 NKX2-1P43699 371 aaPredicted RBP4.45□□□□□ -1.7
HERC4-205ENST00000412272 LHX2P50458 406 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 IL13RA2Q14627 380 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 ADIRFQ15847 76 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 FAM78AQ5JUQ0 283 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 PRRT2Q7Z6L0 340 aaPredicted RBP4.45□□□□□ -1.7
HERC4-205ENST00000412272 SLC35F2Q8IXU6 374 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.45□□□□□ -1.7
HERC4-205ENST00000412272 OR2M3Q8NG83 312 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 PLPPR1Q8TBJ4 325 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 SAP25Q8TEE9 199 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 SOCS4Q8WXH5 440 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 LHX4Q969G2 390 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 KLK13Q9UKR3 277 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 RCL1Q9Y2P8 373 aaKnown RBP4.45□□□□□ -1.7
HERC4-205ENST00000412272 A0A1W2PRX2 142 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 ZNF850A8MQ14 1090 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 K7EN84 100 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 SIRPB1O00241 398 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 CDC42EP2O14613 210 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 DKK1O94907 266 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 LGALS2P05162 132 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 CXCL12P48061 93 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 XGP55808 180 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 RHOAP61586 193 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 ROM1Q03395 351 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 RHBDD2Q6NTF9 364 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 ADAMTSL5Q6ZMM2 481 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 Q6ZUT4 128 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 FAM19A5Q7Z5A7 132 aaPredicted RBP4.45□□□□□ -1.7
HERC4-205ENST00000412272 LYPD6Q86Y78 171 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 SCCPDHQ8NBX0 429 aa4.45□□□□□ -1.7
HERC4-205ENST00000412272 OR8S1Q8NH09 359 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms