RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 CCSMST1Q4G0I0 132 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 FBLN7Q53RD9 439 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 TIFABQ6ZNK6 161 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 AMN1Q8IY45 258 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.02□□□□□ -1.77
PTPN13-202ENST00000411767 DEFB108BQ8NET1 73 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 NRG4Q8WWG1 115 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 PRSS27Q9BQR3 290 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 ST6GALNAC4Q9H4F1 302 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 SERP1Q9Y6X1 66 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 ARHGEF40Q8TER5 1519 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 TMSB15BA0A087X1C1 80 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 A0A1W2PRS3 328 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 C5orf49A4QMS7 147 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 ZNF729A6NN14 1252 aaPredicted RBP4.02□□□□□ -1.77
PTPN13-202ENST00000411767 MKRN2OSH3BPM6 223 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 SPNP16150 400 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 TSPAN7P41732 249 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 SAMD5Q5TGI4 173 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 CLEC4DQ8WXI8 215 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 TM4SF18Q96CE8 201 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 DUX3Q96PT4 197 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 TMEM243Q9BU79 118 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 RNF122Q9H9V4 155 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 H3BUT2 72 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 B4GALT1P15291 398 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 UCP1P25874 307 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 HSD52Q0P140 79 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 ZP4Q12836 540 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 SPRED2Q7Z698 418 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 C17orf47Q8NEP4 570 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 SLC50A1Q9BRV3 221 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 FOXD3Q9UJU5 478 aaPredicted RBP4.02□□□□□ -1.77
PTPN13-202ENST00000411767 A2MP01023 1474 aa4.02□□□□□ -1.77
PTPN13-202ENST00000411767 KIF1BO60333 1816 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 EDIL3O43854 480 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 APOHP02749 345 aaPredicted RBP4.01□□□□□ -1.77
PTPN13-202ENST00000411767 PNLIPP16233 465 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 GZMHP20718 246 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 RAE1P78406 368 aaKnown RBP4.01□□□□□ -1.77
PTPN13-202ENST00000411767 ECM1Q16610 540 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 Q6ZS52 159 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 RDH5Q92781 318 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 KCNK17Q96T54 332 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 NTMT1Q9BV86 223 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 GNB1LQ9BYB4 327 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 PRR36Q9H6K5 1346 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 MADDQ8WXG6 1647 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 TRGV8A0A0C4DH27 118 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 CLDN7O95471 211 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 ARL14EPLP0DKL9 152 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 FUT3P21217 361 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 COX7A1P24310 79 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 ZNF658BQ4V348 819 aaPredicted RBP4.01□□□□□ -1.77
PTPN13-202ENST00000411767 LINC00305Q7Z4B0 112 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 SPSB1Q96BD6 273 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 KLK15Q9H2R5 256 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 ZNF385DQ9H6B1 395 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 SEMA5BQ9P283 1151 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 PSORS1C1Q9UIG5 152 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 HCFC2Q9Y5Z7 792 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 SRP19P09132 144 aaKnown RBP4.01□□□□□ -1.77
PTPN13-202ENST00000411767 SMAD4Q13485 552 aaKnown RBP4.01□□□□□ -1.77
PTPN13-202ENST00000411767 FOXB2Q5VYV0 432 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 THSD4Q6ZMP0 1018 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 OR9G1Q8NH87 305 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 PEMTQ9UBM1 199 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 A0A0G2JLW4 131 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 LIFP15018 202 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 GNG3P63215 75 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 TMEM108Q6UXF1 575 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 TMEM144Q7Z5S9 345 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 OR5P3Q8WZ94 311 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 OVOS2A0A0G2JMS6 1433 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 A8MXK9 166 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 FUSP35637 526 aaKnown RBP eCLIP4.01□□□□□ -1.77
PTPN13-202ENST00000411767 RPS11P62280 158 aaKnown RBP eCLIP4.01□□□□□ -1.77
PTPN13-202ENST00000411767 OR11H6Q8NGC7 330 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 SPSB4Q96A44 273 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 JMJD8Q96S16 334 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 ADOQ96SZ5 270 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 CXorf36Q9H7Y0 433 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 IGKV3-7A0A075B6H7 116 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 TCRBV7S2A1N4TA0A589 114 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 ZNF840PA6NDX5 716 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 F6UB75 175 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 PTGESO14684 152 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 GABRG2P18507 467 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 SLC25A35Q3KQZ1 300 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 ADGRA1Q86SQ6 560 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 C2CD4AQ8NCU7 369 aaPredicted RBP4.01□□□□□ -1.77
PTPN13-202ENST00000411767 C20orf141Q9NUB4 165 aa4.01□□□□□ -1.77
PTPN13-202ENST00000411767 H3BTX0 84 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 IFNL4K9M1U5 179 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 CRLF1O75462 422 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 IL18BPO95998 194 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 NGFP01138 241 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 CCL11P51671 97 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 ATP5G2Q06055 141 aa4□□□□□ -1.77
PTPN13-202ENST00000411767 LINC00596Q86U02 117 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms