RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 CDK1P06493 297 aa11.36□□□□□ -0.59
MCF2L-210ENST00000409954 NHLRC4P0CG21 123 aaPredicted RBP11.36□□□□□ -0.59
MCF2L-210ENST00000409954 CHATP28329 748 aa11.36□□□□□ -0.59
MCF2L-210ENST00000409954 RANBP1P43487 201 aa11.36□□□□□ -0.59
MCF2L-210ENST00000409954 RAB25P57735 213 aa11.36□□□□□ -0.59
MCF2L-210ENST00000409954 ACTBP60709 375 aa11.36□□□□□ -0.59
MCF2L-210ENST00000409954 SPHARQ15513 63 aa11.36□□□□□ -0.59
MCF2L-210ENST00000409954 LIN54Q6MZP7 749 aa11.36□□□□□ -0.59
MCF2L-210ENST00000409954 ODF3L1Q8IXM7 274 aa11.36□□□□□ -0.59
MCF2L-210ENST00000409954 OR2AK2Q8NG84 335 aa11.36□□□□□ -0.59
MCF2L-210ENST00000409954 C4orf3Q8WVX3 66 aa11.36□□□□□ -0.59
MCF2L-210ENST00000409954 FAM46BQ96A09 425 aa11.36□□□□□ -0.59
MCF2L-210ENST00000409954 UBE2E2Q96LR5 201 aa11.36□□□□□ -0.59
MCF2L-210ENST00000409954 NABP2Q9BQ15 211 aa11.36□□□□□ -0.59
MCF2L-210ENST00000409954 HSPB9Q9BQS6 159 aa11.36□□□□□ -0.59
MCF2L-210ENST00000409954 FAAP24Q9BTP7 215 aa11.36□□□□□ -0.59
MCF2L-210ENST00000409954 SCN3BQ9NY72 215 aa11.36□□□□□ -0.59
MCF2L-210ENST00000409954 PIPOXQ9P0Z9 390 aa11.36□□□□□ -0.59
MCF2L-210ENST00000409954 STEAP1Q9UHE8 339 aa11.36□□□□□ -0.59
MCF2L-210ENST00000409954 PTGES3LE9PB15 166 aa11.35□□□□□ -0.59
MCF2L-210ENST00000409954 HLA-DRB1P01911 266 aa11.35□□□□□ -0.59
MCF2L-210ENST00000409954 VSIG8P0DPA2 414 aa11.35□□□□□ -0.59
MCF2L-210ENST00000409954 PPIFP30405 207 aaKnown RBP11.35□□□□□ -0.59
MCF2L-210ENST00000409954 PPP1CCP36873 323 aaKnown RBP11.35□□□□□ -0.59
MCF2L-210ENST00000409954 RPS27AP62979 156 aaKnown RBP11.35□□□□□ -0.59
MCF2L-210ENST00000409954 GABPB1Q06547 395 aaPredicted RBP11.35□□□□□ -0.59
MCF2L-210ENST00000409954 NKAPLQ5M9Q1 402 aa11.35□□□□□ -0.59
MCF2L-210ENST00000409954 C6orf141Q5SZD1 244 aa11.35□□□□□ -0.59
MCF2L-210ENST00000409954 FAM71F2Q6NXP2 309 aa11.35□□□□□ -0.59
MCF2L-210ENST00000409954 ZNF833PQ6ZTB9 187 aa11.35□□□□□ -0.59
MCF2L-210ENST00000409954 CEACAM19Q7Z692 300 aa11.35□□□□□ -0.59
MCF2L-210ENST00000409954 NPBQ8NG41 125 aa11.35□□□□□ -0.59
MCF2L-210ENST00000409954 DUX3Q96PT4 197 aa11.35□□□□□ -0.59
MCF2L-210ENST00000409954 TM2D1Q9BX74 207 aa11.35□□□□□ -0.59
MCF2L-210ENST00000409954 TMEM59Q9BXS4 323 aa11.35□□□□□ -0.59
MCF2L-210ENST00000409954 OR51J1Q9H342 316 aa11.35□□□□□ -0.59
MCF2L-210ENST00000409954 KIAA1456Q9P272 454 aa11.35□□□□□ -0.59
MCF2L-210ENST00000409954 RAB29O14966 203 aa11.34□□□□□ -0.59
MCF2L-210ENST00000409954 NBR2O15453 112 aa11.34□□□□□ -0.59
MCF2L-210ENST00000409954 HTR2CP28335 458 aa11.34□□□□□ -0.59
MCF2L-210ENST00000409954 MC5RP33032 325 aa11.34□□□□□ -0.59
MCF2L-210ENST00000409954 INSL3P51460 131 aa11.34□□□□□ -0.59
MCF2L-210ENST00000409954 RUNX1Q01196 453 aa11.34□□□□□ -0.59
MCF2L-210ENST00000409954 HMGN3Q15651 99 aa11.34□□□□□ -0.59
MCF2L-210ENST00000409954 C5orf64Q2M2E5 130 aa11.34□□□□□ -0.59
MCF2L-210ENST00000409954 HSD17B12Q53GQ0 312 aa11.34□□□□□ -0.59
MCF2L-210ENST00000409954 C6orf201Q7Z4U5 140 aa11.34□□□□□ -0.59
MCF2L-210ENST00000409954 LRRTM1Q86UE6 522 aa11.34□□□□□ -0.59
MCF2L-210ENST00000409954 OR11H1Q8NG94 326 aa11.34□□□□□ -0.59
MCF2L-210ENST00000409954 RNF5Q99942 180 aa11.34□□□□□ -0.59
MCF2L-210ENST00000409954 SULT4A1Q9BR01 284 aa11.34□□□□□ -0.59
MCF2L-210ENST00000409954 PLEKHJ1Q9NW61 149 aa11.34□□□□□ -0.59
MCF2L-210ENST00000409954 MGAT4AQ9UM21 535 aa11.34□□□□□ -0.59
MCF2L-210ENST00000409954 VSIG4Q9Y279 399 aa11.34□□□□□ -0.59
MCF2L-210ENST00000409954 ITGB1BP1O14713 200 aa11.33□□□□□ -0.6
MCF2L-210ENST00000409954 SLC22A1O15245 554 aa11.33□□□□□ -0.6
MCF2L-210ENST00000409954 NAPSAO96009 420 aa11.33□□□□□ -0.6
MCF2L-210ENST00000409954 IGLV1-40P01703 118 aa11.33□□□□□ -0.6
MCF2L-210ENST00000409954 SLC2A2P11168 524 aaPredicted RBP11.33□□□□□ -0.6
MCF2L-210ENST00000409954 BLVRBP30043 206 aaPredicted RBP11.33□□□□□ -0.6
MCF2L-210ENST00000409954 GNMTQ14749 295 aa11.33□□□□□ -0.6
MCF2L-210ENST00000409954 RBM48Q5RL73 367 aaKnown RBP11.33□□□□□ -0.6
MCF2L-210ENST00000409954 ZNF660Q6AZW8 331 aaPredicted RBP11.33□□□□□ -0.6
MCF2L-210ENST00000409954 OR10K2Q6IF99 312 aa11.33□□□□□ -0.6
MCF2L-210ENST00000409954 ZNF880Q6PDB4 577 aa11.33□□□□□ -0.6
MCF2L-210ENST00000409954 ZNF491Q8N8L2 437 aa11.33□□□□□ -0.6
MCF2L-210ENST00000409954 MYOZ3Q8TDC0 251 aa11.33□□□□□ -0.6
MCF2L-210ENST00000409954 IL1F10Q8WWZ1 152 aa11.33□□□□□ -0.6
MCF2L-210ENST00000409954 RITA1Q96K30 269 aa11.33□□□□□ -0.6
MCF2L-210ENST00000409954 URM1Q9BTM9 101 aaKnown RBP11.33□□□□□ -0.6
MCF2L-210ENST00000409954 TMED9Q9BVK6 235 aa11.33□□□□□ -0.6
MCF2L-210ENST00000409954 MRPL20Q9BYC9 149 aaKnown RBP11.33□□□□□ -0.6
MCF2L-210ENST00000409954 ANKRD60Q9BZ19 345 aa11.33□□□□□ -0.6
MCF2L-210ENST00000409954 TPRKBQ9Y3C4 175 aa11.33□□□□□ -0.6
MCF2L-210ENST00000409954 WSB1Q9Y6I7 421 aa11.33□□□□□ -0.6
MCF2L-210ENST00000409954 DNAH3Q8TD57 4116 aa11.33□□□□□ -0.6
MCF2L-210ENST00000409954 TRBV6-6A0A0A6YYG2 114 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 IGHV7-81A0A0B4J1V7 117 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 TRAV41A0A0B4J266 112 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 TMEM14DPA8MWL7 114 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 SEC14L6B5MCN3 397 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 NDUFA3O95167 84 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 UCHL1P09936 223 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 OR8U8P0C7N1 319 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 MYF6P23409 242 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 RAB9AP51151 201 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 TMEM267Q0VDI3 215 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-210ENST00000409954 FHL3Q13643 280 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 KIAA0141Q14154 515 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-210ENST00000409954 INSL4Q14641 139 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 MED22Q15528 200 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 TRAM1Q15629 374 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 DEFB136Q30KP8 78 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 MOB1BQ7L9L4 216 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 C5orf24Q7Z6I8 188 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 FAM89BQ8N5H3 189 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 MINDY2Q8NBR6 621 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 OR6M1Q8NGM8 313 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 OR1N2Q8NGR9 330 aa11.32□□□□□ -0.6
MCF2L-210ENST00000409954 WWC2-AS2Q96NR7 200 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms