RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 B4DEV8 164 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 BHLHE40O14503 412 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 FBP1P09467 338 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 ZNF806P0C7X5 589 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 FAM228BP0C875 321 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 KCNE1P15382 129 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 CBR1P16152 277 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 CTLA4P16410 223 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 ZNF823P16415 610 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 KLK2P20151 261 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 MAP2K4P45985 399 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 MNAT1P51948 309 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 KRTAP10-12P60413 245 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 UBE2SQ16763 222 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 EBLN2Q6P2I7 272 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 Q6ZR54 194 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 WDR86Q86TI4 376 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 DEFB125Q8N687 156 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 OR10G2Q8NGC3 310 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 OR52N1Q8NH53 320 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 BORCS7Q96B45 105 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 ZNF799Q96GE5 643 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 BOLA2Q9H3K6 86 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 C11orf49Q9H6J7 331 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 LHX9Q9NQ69 397 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 C21orf62Q9NYP8 219 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 IDI2-AS1Q9NZ38 188 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 PCYT1BQ9Y5K3 369 aaPredicted RBP3.28□□□□□ -1.88
LSM5-205ENST00000409952 CCDC180Q9P1Z9 1646 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 SETD1AO15047 1707 aaKnown RBP3.27□□□□□ -1.89
LSM5-205ENST00000409952 BICRAQ9NZM4 1560 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 TRBV6-6A0A0A6YYG2 114 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 OR4C46A6NHA9 309 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 MRASO14807 208 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 ZNF207O43670 478 aaKnown RBP3.27□□□□□ -1.89
LSM5-205ENST00000409952 SRSF10O75494 262 aaKnown RBP3.27□□□□□ -1.89
LSM5-205ENST00000409952 CDRT1O95170 752 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 LTAP01374 205 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 TTRP02766 147 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 C1GALT1C1LP0DN25 315 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 ESDP10768 282 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 ORM2P19652 201 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 MPIP34949 423 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 WNT4P56705 351 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 HERVK_113P63121 156 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 ELF3P78545 371 aaPredicted RBP3.27□□□□□ -1.89
LSM5-205ENST00000409952 HES3Q5TGS1 186 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 LAIR2Q6ISS4 152 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 SBSNQ6UWP8 590 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 LINC01551Q86U37 167 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 MCFD2Q8NI22 146 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 SFRP2Q96HF1 295 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 PPP1R2P1Q96PQ5 205 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 OR2V2Q96R30 315 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 MARVELD1Q9BSK0 173 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 ULBP3Q9BZM4 244 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 PCBD2Q9H0N5 130 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 MED28Q9H204 178 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 C8orf4Q9NR00 106 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 TMEM38BQ9NVV0 291 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 TAS2R1Q9NYW7 299 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 SMPXQ9UHP9 88 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 WASHC3Q9Y3C0 194 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 FIS1Q9Y3D6 152 aa3.27□□□□□ -1.89
LSM5-205ENST00000409952 FAM32AQ9Y421 112 aaKnown RBP3.27□□□□□ -1.89
LSM5-205ENST00000409952 DNMT1P26358 1616 aaKnown RBP3.26□□□□□ -1.89
LSM5-205ENST00000409952 IGHV1-3A0A0C4DH29 117 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 OR6C6A6NF89 314 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 FAM159BA6NKW6 160 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 ZNF861PO60384 105 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 DEDDO75618 318 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 HLA-DQB1P01920 261 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 IL1RNP18510 177 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 OPRK1P41145 380 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 CRYBA4P53673 196 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 BTN1A1Q13410 526 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 ZNF678Q5SXM1 525 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 CYB5R2Q6BCY4 276 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 ZFP1Q6P2D0 407 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 Q8N7P7 452 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 OR8S1Q8NH09 359 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 LINC01560Q8TB33 94 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 PYDC1Q8WXC3 89 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 SLC25A46Q96AG3 418 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 ELSPBP1Q96BH3 223 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 SLC25A44Q96H78 314 aaPredicted RBP3.26□□□□□ -1.89
LSM5-205ENST00000409952 ABHD14BQ96IU4 210 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 ENY2Q9NPA8 101 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 ZNF355PQ9NSJ1 428 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 C19orf12Q9NSK7 152 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 MRPL27Q9P0M9 148 aaKnown RBP3.26□□□□□ -1.89
LSM5-205ENST00000409952 ZNF492Q9P255 531 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 OPTCQ9UBM4 332 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 PKIGQ9Y2B9 76 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 PLCH2O75038 1416 aa3.26□□□□□ -1.89
LSM5-205ENST00000409952 TET2Q6N021 2002 aaPredicted RBP3.26□□□□□ -1.89
LSM5-205ENST00000409952 ZNFX1Q9P2E3 1918 aaKnown RBP3.25□□□□□ -1.89
LSM5-205ENST00000409952 ADGRL1O94910 1474 aa3.25□□□□□ -1.89
LSM5-205ENST00000409952 ARAP1Q96P48 1450 aa3.25□□□□□ -1.89
LSM5-205ENST00000409952 A0A096LNJ9 63 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms