RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 OR5D13Q8NGL4 314 aa10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 SLC25A40Q8TBP6 338 aa10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 TMED6Q8WW62 240 aa10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 SMIM8Q96KF7 97 aa10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 WFIKKN1Q96NZ8 548 aa10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 USB1Q9BQ65 265 aaKnown RBP10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 FGF23Q9GZV9 251 aaPredicted RBP10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 PARP11Q9NR21 331 aa10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 TMA7Q9Y2S6 64 aaKnown RBP10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 STRAPQ9Y3F4 350 aaKnown RBP10.87□□□□□ -0.67
SMARCB1-203ENST00000407082 A0A1W2PPR1 153 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 MSGN1A6NI15 193 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 OR5H1A6NKK0 313 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 WRBO00258 174 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 HS3ST1O14792 307 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 HSPA12AO43301 675 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 IGKV3-15P01624 115 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 SCTP09683 121 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 PGA5P0DJD9 388 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 F2RL1P55085 397 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 TMEM33P57088 247 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 ZNF266Q14584 549 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 ZNF146Q15072 292 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 C3orf36Q3SXR2 165 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 TIMM23BQ5SRD1 257 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 ALKBH2Q6NS38 261 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 Q6P435 159 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 SVBPQ8N300 66 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 SCCPDHQ8NBX0 429 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 ZBTB34Q8NCN2 500 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 OR8G5Q8NG78 346 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 OR4D5Q8NGN0 318 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 OR1S2Q8NGQ3 325 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 MUCL1Q96DR8 90 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 NARS2Q96I59 477 aaKnown RBP10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 OR2J1Q9GZK6 312 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 ZNF581Q9P0T4 197 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 FBXL17Q9UF56 701 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 TRAPPC2LQ9UL33 140 aa10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 SONP18583 2426 aaKnown RBP10.86□□□□□ -0.67
SMARCB1-203ENST00000407082 ZANQ9Y493 2812 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 TRAV24A0A0B4J272 114 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 A0A1W2PR80 420 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 TMEM218A2RU14 115 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 LGALS8O00214 317 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 ATG12O94817 140 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 APOC3P02656 99 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 FAM157CP0CG43 387 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 KITLGP21583 273 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 ERVK11-1P61568 191 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 HMGN3Q15651 99 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 RPL7L1Q6DKI1 246 aaKnown RBP10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 TRAT1Q6PIZ9 186 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 C22orf34Q6ZV56 151 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 H1FOOQ8IZA3 346 aaPredicted RBP10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 SELENOHQ8IZQ5 122 aaKnown RBP10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 LRRC75A-AS1Q8N1F1 130 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 GAPTQ8N292 157 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 SLC35G3Q8N808 338 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 BPIFCQ8NFQ6 507 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 OR10V1Q8NGI7 309 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 TMEM158Q8WZ71 300 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 RDH5Q92781 318 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 TP53RKQ96S44 253 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 NRIP2Q9BQI9 281 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 ARV1Q9H2C2 271 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 OR51B6Q9H340 312 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 TAAR3PQ9P1P4 343 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 PURGQ9UJV8 347 aaKnown RBP10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 WIPI2Q9Y4P8 454 aa10.85□□□□□ -0.67
SMARCB1-203ENST00000407082 A0A1B0GU03 582 aa10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 TRIM77I1YAP6 450 aa10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 IFNL4K9M1U5 179 aa10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 SERPINE2P07093 398 aa10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 F2RP25116 425 aa10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 BAXQ07812 192 aa10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 MSMO1Q15800 293 aa10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 FAM209AQ5JX71 171 aa10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 ZNF497Q6ZNH5 498 aa10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 ZNF818PQ6ZRF7 136 aa10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 TCTEX1D1Q8N7M0 179 aa10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 WDR31Q8NA23 367 aa10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 OR11L1Q8NGX0 322 aa10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 KLF14Q8TD94 323 aaPredicted RBP10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 FAM216AQ8WUB2 273 aa10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 CCL19Q99731 98 aa10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 GINS3Q9BRX5 216 aa10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 UBTD1Q9HAC8 227 aa10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 SEBOXQ9HB31 216 aaPredicted RBP10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 TREM1Q9NP99 234 aa10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 LIN7CQ9NUP9 197 aaKnown RBP10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 RCL1Q9Y2P8 373 aaKnown RBP10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 RBM7Q9Y580 266 aaKnown RBP10.84□□□□□ -0.67
SMARCB1-203ENST00000407082 TMEM30CPA0ZSE6 113 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 SLC33A1O00400 549 aaPredicted RBP10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 HSD17B6O14756 317 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 TIMM8AO60220 97 aaPredicted RBP10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 MED6O75586 246 aa10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 PGLYRP1O75594 196 aaPredicted RBP10.83□□□□□ -0.68
SMARCB1-203ENST00000407082 SNAPINO95295 136 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms