RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 CPEB3Q8NE35 698 aaKnown RBP13.19□□□□□ -0.3
ATG4B-205ENST00000404914 ERRFI1Q9UJM3 462 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-205ENST00000404914 CST2P09228 141 aa13.19□□□□□ -0.3
ATG4B-205ENST00000404914 EGR1P18146 543 aa13.19□□□□□ -0.3
ATG4B-205ENST00000404914 BMP5P22003 454 aa13.19□□□□□ -0.3
ATG4B-205ENST00000404914 CEACAM16Q2WEN9 425 aa13.19□□□□□ -0.3
ATG4B-205ENST00000404914 BTNL3Q6UXE8 466 aa13.19□□□□□ -0.3
ATG4B-205ENST00000404914 OR56B2PQ8NGI1 322 aa13.19□□□□□ -0.3
ATG4B-205ENST00000404914 OR10V1Q8NGI7 309 aa13.19□□□□□ -0.3
ATG4B-205ENST00000404914 MRPL30Q8TCC3 161 aaKnown RBP13.19□□□□□ -0.3
ATG4B-205ENST00000404914 RAB40CQ96S21 281 aa13.19□□□□□ -0.3
ATG4B-205ENST00000404914 PSMG3Q9BT73 122 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-205ENST00000404914 IGLV2-14P01704 120 aa13.18□□□□□ -0.3
ATG4B-205ENST00000404914 SERPINE2P07093 398 aa13.18□□□□□ -0.3
ATG4B-205ENST00000404914 GLB1P16278 677 aa13.18□□□□□ -0.3
ATG4B-205ENST00000404914 ZNF324BQ6AW86 544 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-205ENST00000404914 OR8G2PQ6IF36 304 aa13.18□□□□□ -0.3
ATG4B-205ENST00000404914 CENPVQ7Z7K6 275 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-205ENST00000404914 ATP23Q9Y6H3 246 aa13.18□□□□□ -0.3
ATG4B-205ENST00000404914 SYNGR1O43759 233 aa13.18□□□□□ -0.3
ATG4B-205ENST00000404914 VAMP5O95183 116 aa13.18□□□□□ -0.3
ATG4B-205ENST00000404914 LIFP15018 202 aa13.18□□□□□ -0.3
ATG4B-205ENST00000404914 RABEPKQ7Z6M1 372 aa13.18□□□□□ -0.3
ATG4B-205ENST00000404914 RDH5Q92781 318 aa13.18□□□□□ -0.3
ATG4B-205ENST00000404914 AGMATQ9BSE5 352 aa13.18□□□□□ -0.3
ATG4B-205ENST00000404914 SLC39A9Q9NUM3 307 aa13.18□□□□□ -0.3
ATG4B-205ENST00000404914 C1QTNF9BB2RNN3 333 aa13.18□□□□□ -0.3
ATG4B-205ENST00000404914 HS3ST1O14792 307 aa13.18□□□□□ -0.3
ATG4B-205ENST00000404914 HRASP01112 189 aa13.18□□□□□ -0.3
ATG4B-205ENST00000404914 ZNF25P17030 456 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-205ENST00000404914 CHRNA7P36544 502 aa13.18□□□□□ -0.3
ATG4B-205ENST00000404914 TGIF2LYQ8IUE0 185 aa13.18□□□□□ -0.3
ATG4B-205ENST00000404914 IL1F10Q8WWZ1 152 aa13.18□□□□□ -0.3
ATG4B-205ENST00000404914 A0A0G2JMM0 328 aa13.17□□□□□ -0.3
ATG4B-205ENST00000404914 A0A1W2PPB8 328 aa13.17□□□□□ -0.3
ATG4B-205ENST00000404914 A0A1W2PRS3 328 aa13.17□□□□□ -0.3
ATG4B-205ENST00000404914 KIR3DP1A8MWS1 328 aa13.17□□□□□ -0.3
ATG4B-205ENST00000404914 NPPCP23582 126 aa13.17□□□□□ -0.3
ATG4B-205ENST00000404914 TDGF1P3P51864 188 aa13.17□□□□□ -0.3
ATG4B-205ENST00000404914 YRDCQ86U90 279 aaKnown RBP13.17□□□□□ -0.3
ATG4B-205ENST00000404914 OR4F5Q8NH21 305 aa13.17□□□□□ -0.3
ATG4B-205ENST00000404914 TAF15Q92804 592 aaKnown RBP eCLIP13.17□□□□□ -0.3
ATG4B-205ENST00000404914 IL22RA2Q969J5 263 aa13.17□□□□□ -0.3
ATG4B-205ENST00000404914 OR5B12Q96R08 314 aa13.17□□□□□ -0.3
ATG4B-205ENST00000404914 OR4F4Q96R69 305 aa13.17□□□□□ -0.3
ATG4B-205ENST00000404914 FOXB1Q99853 325 aa13.17□□□□□ -0.3
ATG4B-205ENST00000404914 REPIN1Q9BWE0 567 aaKnown RBP13.17□□□□□ -0.3
ATG4B-205ENST00000404914 OR6C3Q9NZP0 311 aa13.17□□□□□ -0.3
ATG4B-205ENST00000404914 PPP1R3CQ9UQK1 317 aa13.17□□□□□ -0.3
ATG4B-205ENST00000404914 USF3Q68DE3 2245 aa13.17□□□□□ -0.3
ATG4B-205ENST00000404914 SCGB1D1O95968 90 aa13.17□□□□□ -0.3
ATG4B-205ENST00000404914 ZNF16P17020 682 aaPredicted RBP13.17□□□□□ -0.3
ATG4B-205ENST00000404914 CCNOP22674 350 aa13.17□□□□□ -0.3
ATG4B-205ENST00000404914 CARFQ8N187 725 aa13.17□□□□□ -0.3
ATG4B-205ENST00000404914 GBGT1Q8N5D6 347 aa13.17□□□□□ -0.3
ATG4B-205ENST00000404914 Q8NFD4 153 aa13.17□□□□□ -0.3
ATG4B-205ENST00000404914 TMEM18Q96B42 140 aa13.17□□□□□ -0.3
ATG4B-205ENST00000404914 OR51I2Q9H344 312 aa13.17□□□□□ -0.3
ATG4B-205ENST00000404914 GYPAP02724 150 aa13.16□□□□□ -0.3
ATG4B-205ENST00000404914 FGF12P61328 243 aa13.16□□□□□ -0.3
ATG4B-205ENST00000404914 TDRG1Q3Y452 100 aa13.16□□□□□ -0.3
ATG4B-205ENST00000404914 ZNF585BQ52M93 769 aa13.16□□□□□ -0.3
ATG4B-205ENST00000404914 C9orf135Q5VTT2 229 aa13.16□□□□□ -0.3
ATG4B-205ENST00000404914 OR5P3Q8WZ94 311 aa13.16□□□□□ -0.3
ATG4B-205ENST00000404914 ACY3Q96HD9 319 aa13.16□□□□□ -0.3
ATG4B-205ENST00000404914 RBM14Q96PK6 669 aaKnown RBP13.16□□□□□ -0.3
ATG4B-205ENST00000404914 CD300LBA8K4G0 201 aa13.16□□□□□ -0.3
ATG4B-205ENST00000404914 LILRA1O75019 489 aa13.16□□□□□ -0.3
ATG4B-205ENST00000404914 RAB4BP61018 213 aa13.16□□□□□ -0.3
ATG4B-205ENST00000404914 SERF2P84101 59 aa13.16□□□□□ -0.3
ATG4B-205ENST00000404914 PRDX4Q13162 271 aa13.16□□□□□ -0.3
ATG4B-205ENST00000404914 PRR18Q8N4B5 295 aa13.16□□□□□ -0.3
ATG4B-205ENST00000404914 OR2T10Q8NGZ9 312 aa13.16□□□□□ -0.3
ATG4B-205ENST00000404914 OR2W1Q9Y3N9 320 aa13.16□□□□□ -0.3
ATG4B-205ENST00000404914 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.15□□□□□ -0.3
ATG4B-205ENST00000404914 ZNF716A6NP11 495 aa13.15□□□□□ -0.3
ATG4B-205ENST00000404914 WDR74Q6RFH5 385 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-205ENST00000404914 FKBP11Q9NYL4 201 aa13.15□□□□□ -0.3
ATG4B-205ENST00000404914 MED12LQ86YW9 2145 aa13.15□□□□□ -0.3
ATG4B-205ENST00000404914 PGPEP1LA6NFU8 196 aa13.15□□□□□ -0.3
ATG4B-205ENST00000404914 TP53I11O14683 189 aa13.15□□□□□ -0.3
ATG4B-205ENST00000404914 GGCTO75223 188 aaKnown RBP13.15□□□□□ -0.3
ATG4B-205ENST00000404914 IFNA1P01562 189 aa13.15□□□□□ -0.3
ATG4B-205ENST00000404914 TDGF1P13385 188 aa13.15□□□□□ -0.3
ATG4B-205ENST00000404914 IL3RAP26951 378 aa13.15□□□□□ -0.3
ATG4B-205ENST00000404914 RPL29P47914 159 aaKnown RBP13.15□□□□□ -0.3
ATG4B-205ENST00000404914 ERVFC1-1P60608 527 aa13.15□□□□□ -0.3
ATG4B-205ENST00000404914 PMP22Q01453 160 aa13.15□□□□□ -0.3
ATG4B-205ENST00000404914 SLC38A11Q08AI6 406 aa13.15□□□□□ -0.3
ATG4B-205ENST00000404914 PCOLCEQ15113 449 aa13.15□□□□□ -0.3
ATG4B-205ENST00000404914 KMT5CQ86Y97 462 aa13.15□□□□□ -0.3
ATG4B-205ENST00000404914 KIR2DS1A0A191URI9 304 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 CXCL13O43927 109 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 NPSP0C0P6 89 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 KIR2DS4P43632 304 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 CLDN15P56746 228 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 KIR2DS1Q14954 304 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 FAM78BQ5VT40 261 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 AAED1Q7RTV5 226 aa13.14□□□□□ -0.31
ATG4B-205ENST00000404914 IL17BQ9UHF5 180 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms