RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 CT45A3Q8NHU0 189 aa23.78■■□□□ 1.4
USP42-202ENST00000404008 PRDM13Q9H4Q3 707 aa23.78■■□□□ 1.4
USP42-202ENST00000404008 AMMECR1Q9Y4X0 333 aaPredicted RBP23.78■■□□□ 1.4
USP42-202ENST00000404008 FABP12A6NFH5 140 aa23.77■■□□□ 1.4
USP42-202ENST00000404008 NAT1P18440 290 aa23.77■■□□□ 1.4
USP42-202ENST00000404008 CCDC190Q86UF4 302 aa23.77■■□□□ 1.4
USP42-202ENST00000404008 SIGLECL1Q8N7X8 197 aa23.77■■□□□ 1.4
USP42-202ENST00000404008 OR10X1Q8NGY0 326 aa23.77■■□□□ 1.4
USP42-202ENST00000404008 OR10J5Q8NHC4 309 aa23.77■■□□□ 1.4
USP42-202ENST00000404008 CREB3L1Q96BA8 519 aa23.77■■□□□ 1.4
USP42-202ENST00000404008 MALSU1Q96EH3 234 aa23.77■■□□□ 1.4
USP42-202ENST00000404008 OCEL1Q9H607 264 aa23.77■■□□□ 1.4
USP42-202ENST00000404008 DPM3Q9P2X0 92 aa23.77■■□□□ 1.4
USP42-202ENST00000404008 LY6LH3BQJ8 138 aa23.76■■□□□ 1.39
USP42-202ENST00000404008 OR52I2Q8NH67 350 aa23.76■■□□□ 1.39
USP42-202ENST00000404008 ABHD14AQ9BUJ0 271 aa23.76■■□□□ 1.39
USP42-202ENST00000404008 TOLLIPQ9H0E2 274 aa23.76■■□□□ 1.39
USP42-202ENST00000404008 PARP12Q9H0J9 701 aaKnown RBP23.76■■□□□ 1.39
USP42-202ENST00000404008 LEUTXA8MZ59 168 aa23.75■■□□□ 1.39
USP42-202ENST00000404008 CTDSPLO15194 276 aa23.75■■□□□ 1.39
USP42-202ENST00000404008 CTXN2P0C2S0 81 aa23.75■■□□□ 1.39
USP42-202ENST00000404008 ARPC4P59998 168 aa23.75■■□□□ 1.39
USP42-202ENST00000404008 MRPS10P82664 201 aaKnown RBP23.75■■□□□ 1.39
USP42-202ENST00000404008 RNASE12Q5GAN4 147 aaKnown RBP23.75■■□□□ 1.39
USP42-202ENST00000404008 FAM131AQ6UXB0 335 aa23.75■■□□□ 1.39
USP42-202ENST00000404008 DYNAPQ8N1N2 210 aa23.75■■□□□ 1.39
USP42-202ENST00000404008 OR2AK2Q8NG84 335 aa23.75■■□□□ 1.39
USP42-202ENST00000404008 RDH8Q9NYR8 311 aa23.75■■□□□ 1.39
USP42-202ENST00000404008 V9GYH0 126 aa23.75■■□□□ 1.39
USP42-202ENST00000404008 GABARAPH6UMI1 98 aa23.74■■□□□ 1.39
USP42-202ENST00000404008 PAX6P26367 422 aa23.74■■□□□ 1.39
USP42-202ENST00000404008 CEACAM3P40198 252 aa23.74■■□□□ 1.39
USP42-202ENST00000404008 DGCR2P98153 550 aa23.74■■□□□ 1.39
USP42-202ENST00000404008 SSX2Q16385 188 aa23.74■■□□□ 1.39
USP42-202ENST00000404008 FCAMRQ8WWV6 532 aa23.74■■□□□ 1.39
USP42-202ENST00000404008 GINS4Q9BRT9 223 aa23.74■■□□□ 1.39
USP42-202ENST00000404008 MEGF9Q9H1U4 602 aa23.74■■□□□ 1.39
USP42-202ENST00000404008 ITGB1BP1O14713 200 aa23.73■■□□□ 1.39
USP42-202ENST00000404008 RCVRNP35243 200 aa23.73■■□□□ 1.39
USP42-202ENST00000404008 TPTE2P1Q5T6R2 138 aa23.73■■□□□ 1.39
USP42-202ENST00000404008 Q6YL49 198 aa23.73■■□□□ 1.39
USP42-202ENST00000404008 LDLRAD3Q86YD5 345 aa23.73■■□□□ 1.39
USP42-202ENST00000404008 OR5AP2Q8NGF4 316 aa23.73■■□□□ 1.39
USP42-202ENST00000404008 ZNF418Q8TF45 676 aaPredicted RBP23.73■■□□□ 1.39
USP42-202ENST00000404008 SMIM4Q8WVI0 70 aa23.73■■□□□ 1.39
USP42-202ENST00000404008 EDARADDQ8WWZ3 215 aa23.73■■□□□ 1.39
USP42-202ENST00000404008 ZDHHC16Q969W1 377 aa23.73■■□□□ 1.39
USP42-202ENST00000404008 HILPDAQ9Y5L2 63 aa23.73■■□□□ 1.39
USP42-202ENST00000404008 ETV6P41212 452 aa23.72■■□□□ 1.39
USP42-202ENST00000404008 RBMS3Q6XE24 437 aaKnown RBP23.72■■□□□ 1.39
USP42-202ENST00000404008 H1FOOQ8IZA3 346 aaPredicted RBP23.72■■□□□ 1.39
USP42-202ENST00000404008 C11orf54Q9H0W9 315 aaPredicted RBP23.72■■□□□ 1.39
USP42-202ENST00000404008 KLK11Q9UBX7 282 aa23.72■■□□□ 1.39
USP42-202ENST00000404008 MTFP1Q9UDX5 166 aa23.72■■□□□ 1.39
USP42-202ENST00000404008 SPANXN2Q5MJ10 180 aa23.71■■□□□ 1.39
USP42-202ENST00000404008 LYSMD2Q8IV50 215 aa23.71■■□□□ 1.39
USP42-202ENST00000404008 IFI27L2Q9H2X8 130 aa23.71■■□□□ 1.39
USP42-202ENST00000404008 NECAP2Q9NVZ3 263 aa23.71■■□□□ 1.39
USP42-202ENST00000404008 PTTG2Q9NZH5 202 aa23.71■■□□□ 1.39
USP42-202ENST00000404008 ST8SIA5O15466 376 aa23.7■■□□□ 1.38
USP42-202ENST00000404008 RBBP9O75884 186 aa23.7■■□□□ 1.38
USP42-202ENST00000404008 PTBP1P26599 531 aaKnown RBP eCLIP23.7■■□□□ 1.38
USP42-202ENST00000404008 IL3RAP26951 378 aa23.7■■□□□ 1.38
USP42-202ENST00000404008 RAB7AP51149 207 aa23.7■■□□□ 1.38
USP42-202ENST00000404008 ZNF137PP52743 207 aa23.7■■□□□ 1.38
USP42-202ENST00000404008 ACTBP60709 375 aa23.7■■□□□ 1.38
USP42-202ENST00000404008 ACTG1P63261 375 aa23.7■■□□□ 1.38
USP42-202ENST00000404008 ODF3L1Q8IXM7 274 aa23.7■■□□□ 1.38
USP42-202ENST00000404008 LYG1Q8N1E2 194 aa23.7■■□□□ 1.38
USP42-202ENST00000404008 ST6GALNAC6Q969X2 333 aa23.7■■□□□ 1.38
USP42-202ENST00000404008 AGMATQ9BSE5 352 aa23.7■■□□□ 1.38
USP42-202ENST00000404008 GSTZ1O43708 216 aaPredicted RBP23.69■■□□□ 1.38
USP42-202ENST00000404008 TAS2R46P59540 309 aa23.69■■□□□ 1.38
USP42-202ENST00000404008 HILS1P60008 231 aa23.69■■□□□ 1.38
USP42-202ENST00000404008 DIAPH2-AS1Q14236 149 aa23.69■■□□□ 1.38
USP42-202ENST00000404008 CDK10Q15131 360 aa23.69■■□□□ 1.38
USP42-202ENST00000404008 ZNF79Q15937 498 aa23.69■■□□□ 1.38
USP42-202ENST00000404008 TOMM40LQ969M1 308 aa23.69■■□□□ 1.38
USP42-202ENST00000404008 RPEQ96AT9 228 aa23.69■■□□□ 1.38
USP42-202ENST00000404008 OOSP1A8MZH6 123 aa23.68■■□□□ 1.38
USP42-202ENST00000404008 IFNA2P01563 188 aa23.68■■□□□ 1.38
USP42-202ENST00000404008 HLA-DMAP28067 261 aa23.68■■□□□ 1.38
USP42-202ENST00000404008 VGLL3A8MV65 326 aa23.67■■□□□ 1.38
USP42-202ENST00000404008 HSD17B6O14756 317 aa23.67■■□□□ 1.38
USP42-202ENST00000404008 HOXA3O43365 443 aaPredicted RBP23.67■■□□□ 1.38
USP42-202ENST00000404008 TCF21O43680 179 aa23.67■■□□□ 1.38
USP42-202ENST00000404008 OR5H8P0DN80 308 aa23.67■■□□□ 1.38
USP42-202ENST00000404008 NFYAP23511 347 aaPredicted RBP23.67■■□□□ 1.38
USP42-202ENST00000404008 IER3P46695 156 aa23.67■■□□□ 1.38
USP42-202ENST00000404008 SSBP1Q04837 148 aaKnown RBP23.67■■□□□ 1.38
USP42-202ENST00000404008 BAMBIQ13145 260 aa23.67■■□□□ 1.38
USP42-202ENST00000404008 AANATQ16613 207 aa23.67■■□□□ 1.38
USP42-202ENST00000404008 PLA1AQ53H76 456 aa23.67■■□□□ 1.38
USP42-202ENST00000404008 OR5H2Q8NGV7 314 aa23.67■■□□□ 1.38
USP42-202ENST00000404008 ESM1Q9NQ30 184 aa23.67■■□□□ 1.38
USP42-202ENST00000404008 RBMX2Q9Y388 322 aaKnown RBP23.67■■□□□ 1.38
USP42-202ENST00000404008 A0A0A6YYJ9 748 aa23.66■■□□□ 1.38
USP42-202ENST00000404008 PMP2P02689 132 aa23.66■■□□□ 1.38
USP42-202ENST00000404008 HRH1P35367 487 aa23.66■■□□□ 1.38
USP42-202ENST00000404008 OR3A3P47888 321 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms