RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 HENMT1Q5T8I9 393 aaKnown RBP1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 SPATA31B1PQ5VZV4 182 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 AMMECR1LQ6DCA0 310 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 TNFAIP8L2Q6P589 184 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 SCGB1D4Q6XE38 83 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 TCF23Q7RTU1 214 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 VN1R4Q7Z5H5 301 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 HS3ST5Q8IZT8 346 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 ZNF664Q8N3J9 261 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 EIF4E3Q8N5X7 224 aaKnown RBP1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 NATD1Q8N6N6 113 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 OR5K1Q8NHB7 308 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 ZNRF2Q8NHG8 242 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 TNFAIP8L1Q8WVP5 186 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 TVP23CQ96ET8 276 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 CCDC42Q96M95 316 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 CCDC94Q9BW85 323 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 DERL2Q9GZP9 239 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 PARVAQ9NVD7 372 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 TMEM216Q9P0N5 145 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 OR5V1Q9UGF6 321 aa1.92□□□□□ -2.1
HMGB1P17-201ENST00000403495 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 OR5H14A6NHG9 310 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 ARGFXA6NJG6 315 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 B4DEV8 164 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 RPP14O95059 124 aaKnown RBP1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 IGLV6-57P01721 117 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 IGHV3-53P01767 116 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 HBZP02008 142 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 CTSEP14091 401 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 CXCL3P19876 107 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 PSMA1P25786 263 aaKnown RBP1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 MIPP30301 263 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 HOXA6P31267 233 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 INPP1P49441 399 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 DAD1P61803 113 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 BASP1P80723 227 aaKnown RBP1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 CASP8Q14790 479 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 HES3Q5TGS1 186 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 RASSF6Q6ZTQ3 369 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 LYPD6Q86Y78 171 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 DOLPP1Q86YN1 238 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 ZBTB8OSQ8IWT0 167 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 OR11G2Q8NGC1 345 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 OR9I1Q8NGQ6 314 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 OR10D3Q8NH80 312 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 TMBIM1Q969X1 311 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 TLCD1Q96CP7 247 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 STACQ99469 402 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 OR2D2Q9H210 308 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 OR51V1Q9H2C8 321 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 UBQLN4Q9NRR5 601 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 KCNIP2Q9NS61 270 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 ZNF443Q9Y2A4 671 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 ALG5Q9Y673 324 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 VWA8A3KMH1 1905 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 EVC2Q86UK5 1308 aa1.91□□□□□ -2.1
HMGB1P17-201ENST00000403495 A0A1W2PP64 1363 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 IGKV1D-37A0A075B6S9 117 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 IGKV3D-11A0A0A0MRZ8 115 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 TMEM114B3SHH9 223 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 GGTLC3B5MD39 225 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 KCNK1O00180 336 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 COPEO14579 308 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 DCTN3O75935 186 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 CPSF4O95639 269 aaKnown RBP1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 IL6P05231 212 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 ATP5G1P05496 136 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 CXCL2P19875 107 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 RAP1GDS1P52306 607 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 GABARAPL2P60520 117 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 ACTBP60709 375 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 CXCR4P61073 352 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 ACTG1P63261 375 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 SLC35A2P78381 396 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 HPCAP84074 193 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 TRMT12Q53H54 448 aaKnown RBP1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 C8orf74Q6P047 294 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 SLC51BQ86UW2 128 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 NAA40Q86UY6 237 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 COMMD7Q86VX2 200 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 MSRB3Q8IXL7 192 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 OR8K1Q8NGG5 319 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 CDC26Q8NHZ8 85 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 SPPL2BQ8TCT7 592 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 GALMQ96C23 342 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 OPTNQ96CV9 577 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 SLC25A44Q96H78 314 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 IL20Q9NYY1 176 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 EMC3Q9P0I2 261 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 LINC00527Q9UJ94 153 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 POLR1DQ9Y2S0 133 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 HDGFL3Q9Y3E1 203 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 OR51B4Q9Y5P0 310 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 DNMT1P26358 1616 aaKnown RBP1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 SSH2Q76I76 1423 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 NUP205Q92621 2012 aa1.9□□□□□ -2.11
HMGB1P17-201ENST00000403495 TEX50A0A1B0GTY4 177 aa1.89□□□□□ -2.11
HMGB1P17-201ENST00000403495 K7EQS6 105 aa1.89□□□□□ -2.11
HMGB1P17-201ENST00000403495 TRAPPC3O43617 180 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms