RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 PARP12Q9H0J9 701 aaKnown RBP13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 MIXL1Q9H2W2 232 aa13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 POMT1Q9Y6A1 747 aa13.87□□□□□ -0.19
PTCHD3P3-201ENST00000403073 JMJD1CQ15652 2540 aa13.86□□□□□ -0.19
PTCHD3P3-201ENST00000403073 ZNF701M0R085 212 aaPredicted RBP13.86□□□□□ -0.19
PTCHD3P3-201ENST00000403073 BET1O15155 118 aa13.86□□□□□ -0.19
PTCHD3P3-201ENST00000403073 HSPA12AO43301 675 aa13.86□□□□□ -0.19
PTCHD3P3-201ENST00000403073 RGS11O94810 467 aa13.86□□□□□ -0.19
PTCHD3P3-201ENST00000403073 FCER2P06734 321 aa13.86□□□□□ -0.19
PTCHD3P3-201ENST00000403073 RNASE1P07998 156 aaKnown RBP13.86□□□□□ -0.19
PTCHD3P3-201ENST00000403073 ZBTB25P24278 435 aa13.86□□□□□ -0.19
PTCHD3P3-201ENST00000403073 LY6EQ16553 131 aa13.86□□□□□ -0.19
PTCHD3P3-201ENST00000403073 KRTAP24-1Q3LI83 254 aa13.86□□□□□ -0.19
PTCHD3P3-201ENST00000403073 Q6ZS49 121 aa13.86□□□□□ -0.19
PTCHD3P3-201ENST00000403073 GVQW1Q8N7I0 195 aa13.86□□□□□ -0.19
PTCHD3P3-201ENST00000403073 RPEQ96AT9 228 aa13.86□□□□□ -0.19
PTCHD3P3-201ENST00000403073 MEIS3P1A6NDR6 274 aa13.85□□□□□ -0.19
PTCHD3P3-201ENST00000403073 VGLL3A8MV65 326 aa13.85□□□□□ -0.19
PTCHD3P3-201ENST00000403073 AANATQ16613 207 aa13.85□□□□□ -0.19
PTCHD3P3-201ENST00000403073 LY6G6FQ5SQ64 297 aa13.85□□□□□ -0.19
PTCHD3P3-201ENST00000403073 C16orf87Q6PH81 154 aa13.85□□□□□ -0.19
PTCHD3P3-201ENST00000403073 LAX1Q8IWV1 398 aa13.85□□□□□ -0.19
PTCHD3P3-201ENST00000403073 LYG1Q8N1E2 194 aa13.85□□□□□ -0.19
PTCHD3P3-201ENST00000403073 FAM216AQ8WUB2 273 aa13.85□□□□□ -0.19
PTCHD3P3-201ENST00000403073 TAF15Q92804 592 aaKnown RBP eCLIP13.85□□□□□ -0.19
PTCHD3P3-201ENST00000403073 TOMM40LQ969M1 308 aa13.85□□□□□ -0.19
PTCHD3P3-201ENST00000403073 ABHD14AQ9BUJ0 271 aa13.85□□□□□ -0.19
PTCHD3P3-201ENST00000403073 ABCB10Q9NRK6 738 aa13.85□□□□□ -0.19
PTCHD3P3-201ENST00000403073 EXTL2Q9UBQ6 330 aa13.85□□□□□ -0.19
PTCHD3P3-201ENST00000403073 KIAA2026Q5HYC2 2103 aa13.85□□□□□ -0.19
PTCHD3P3-201ENST00000403073 BTBD17A6NE02 478 aa13.84□□□□□ -0.19
PTCHD3P3-201ENST00000403073 ST8SIA5O15466 376 aa13.84□□□□□ -0.19
PTCHD3P3-201ENST00000403073 CD24P25063 80 aa13.84□□□□□ -0.19
PTCHD3P3-201ENST00000403073 REG1BP48304 166 aa13.84□□□□□ -0.19
PTCHD3P3-201ENST00000403073 FOXB2Q5VYV0 432 aa13.84□□□□□ -0.19
PTCHD3P3-201ENST00000403073 HOGA1Q86XE5 327 aa13.84□□□□□ -0.19
PTCHD3P3-201ENST00000403073 SNX29P2Q8IUI4 249 aa13.84□□□□□ -0.19
PTCHD3P3-201ENST00000403073 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.84□□□□□ -0.19
PTCHD3P3-201ENST00000403073 OR2AK2Q8NG84 335 aa13.84□□□□□ -0.19
PTCHD3P3-201ENST00000403073 OR5R1Q8NH85 324 aa13.84□□□□□ -0.19
PTCHD3P3-201ENST00000403073 MCFD2Q8NI22 146 aa13.84□□□□□ -0.19
PTCHD3P3-201ENST00000403073 ST6GALNAC6Q969X2 333 aa13.84□□□□□ -0.19
PTCHD3P3-201ENST00000403073 DGCR14Q96DF8 476 aaKnown RBP13.84□□□□□ -0.19
PTCHD3P3-201ENST00000403073 CABLES2Q9BTV7 478 aa13.84□□□□□ -0.19
PTCHD3P3-201ENST00000403073 C6orf62Q9GZU0 229 aaPredicted RBP13.84□□□□□ -0.19
PTCHD3P3-201ENST00000403073 C11orf54Q9H0W9 315 aaPredicted RBP13.84□□□□□ -0.19
PTCHD3P3-201ENST00000403073 RDH8Q9NYR8 311 aa13.84□□□□□ -0.19
PTCHD3P3-201ENST00000403073 VPREB3Q9UKI3 123 aa13.84□□□□□ -0.19
PTCHD3P3-201ENST00000403073 TRBV6-7A0A0A0MS04 114 aa13.83□□□□□ -0.2
PTCHD3P3-201ENST00000403073 OOSP1A8MZH6 123 aa13.83□□□□□ -0.2
PTCHD3P3-201ENST00000403073 HSD17B6O14756 317 aa13.83□□□□□ -0.2
PTCHD3P3-201ENST00000403073 GAPDHP04406 335 aaKnown RBP13.83□□□□□ -0.2
PTCHD3P3-201ENST00000403073 IL3RAP26951 378 aa13.83□□□□□ -0.2
PTCHD3P3-201ENST00000403073 PRSS3P35030 304 aa13.83□□□□□ -0.2
PTCHD3P3-201ENST00000403073 DYNLT3P51808 116 aa13.83□□□□□ -0.2
PTCHD3P3-201ENST00000403073 CNIH2Q6PI25 160 aa13.83□□□□□ -0.2
PTCHD3P3-201ENST00000403073 ODF3L1Q8IXM7 274 aa13.83□□□□□ -0.2
PTCHD3P3-201ENST00000403073 OR10J5Q8NHC4 309 aa13.83□□□□□ -0.2
PTCHD3P3-201ENST00000403073 ZFAND2BQ8WV99 257 aa13.83□□□□□ -0.2
PTCHD3P3-201ENST00000403073 TMEM158Q8WZ71 300 aa13.83□□□□□ -0.2
PTCHD3P3-201ENST00000403073 MDFIQ99750 246 aa13.83□□□□□ -0.2
PTCHD3P3-201ENST00000403073 NXF2Q9GZY0 626 aaKnown RBP13.83□□□□□ -0.2
PTCHD3P3-201ENST00000403073 NDUFA13Q9P0J0 144 aa13.83□□□□□ -0.2
PTCHD3P3-201ENST00000403073 ANXA10Q9UJ72 324 aa13.83□□□□□ -0.2
PTCHD3P3-201ENST00000403073 RNF150Q9ULK6 438 aa13.83□□□□□ -0.2
PTCHD3P3-201ENST00000403073 A0A1W2PPI3 338 aa13.82□□□□□ -0.2
PTCHD3P3-201ENST00000403073 FAM181BA6NEQ2 426 aa13.82□□□□□ -0.2
PTCHD3P3-201ENST00000403073 RNF212BA8MTL3 300 aa13.82□□□□□ -0.2
PTCHD3P3-201ENST00000403073 TIMM23O14925 209 aa13.82□□□□□ -0.2
PTCHD3P3-201ENST00000403073 GPR137BO60478 399 aa13.82□□□□□ -0.2
PTCHD3P3-201ENST00000403073 BRS3P32247 399 aa13.82□□□□□ -0.2
PTCHD3P3-201ENST00000403073 CBX5P45973 191 aa13.82□□□□□ -0.2
PTCHD3P3-201ENST00000403073 OR3A3P47888 321 aa13.82□□□□□ -0.2
PTCHD3P3-201ENST00000403073 RAB7AP51149 207 aa13.82□□□□□ -0.2
PTCHD3P3-201ENST00000403073 CCDC144NLQ6NUI1 221 aa13.82□□□□□ -0.2
PTCHD3P3-201ENST00000403073 CCBE1Q6UXH8 406 aaPredicted RBP13.82□□□□□ -0.2
PTCHD3P3-201ENST00000403073 MOB3BQ86TA1 216 aa13.82□□□□□ -0.2
PTCHD3P3-201ENST00000403073 DRAM1Q8N682 238 aa13.82□□□□□ -0.2
PTCHD3P3-201ENST00000403073 BEST4Q8NFU0 473 aa13.82□□□□□ -0.2
PTCHD3P3-201ENST00000403073 GINS4Q9BRT9 223 aa13.82□□□□□ -0.2
PTCHD3P3-201ENST00000403073 IFI27L2Q9H2X8 130 aa13.82□□□□□ -0.2
PTCHD3P3-201ENST00000403073 ADAM30Q9UKF2 790 aa13.82□□□□□ -0.2
PTCHD3P3-201ENST00000403073 FBN1P35555 2871 aaKnown RBP13.81□□□□□ -0.2
PTCHD3P3-201ENST00000403073 IGHV1-3A0A0C4DH29 117 aa13.81□□□□□ -0.2
PTCHD3P3-201ENST00000403073 A6NDX4 124 aa13.81□□□□□ -0.2
PTCHD3P3-201ENST00000403073 ITGB1BP1O14713 200 aa13.81□□□□□ -0.2
PTCHD3P3-201ENST00000403073 ARHGDIBP52566 201 aa13.81□□□□□ -0.2
PTCHD3P3-201ENST00000403073 ZNF137PP52743 207 aa13.81□□□□□ -0.2
PTCHD3P3-201ENST00000403073 ZNF816Q0VGE8 651 aaPredicted RBP13.81□□□□□ -0.2
PTCHD3P3-201ENST00000403073 KRTAP21-3Q3LHN1 58 aa13.81□□□□□ -0.2
PTCHD3P3-201ENST00000403073 OR56B4Q8NH76 319 aa13.81□□□□□ -0.2
PTCHD3P3-201ENST00000403073 RTN4IP1Q8WWV3 396 aaPredicted RBP13.81□□□□□ -0.2
PTCHD3P3-201ENST00000403073 SNAPC3Q92966 411 aa13.81□□□□□ -0.2
PTCHD3P3-201ENST00000403073 ABHD14BQ96IU4 210 aa13.81□□□□□ -0.2
PTCHD3P3-201ENST00000403073 ABHD1Q96SE0 405 aa13.81□□□□□ -0.2
PTCHD3P3-201ENST00000403073 AGMATQ9BSE5 352 aa13.81□□□□□ -0.2
PTCHD3P3-201ENST00000403073 C19orf24Q9BVV8 132 aa13.81□□□□□ -0.2
PTCHD3P3-201ENST00000403073 TOLLIPQ9H0E2 274 aa13.81□□□□□ -0.2
PTCHD3P3-201ENST00000403073 IFT46Q9NQC8 304 aa13.81□□□□□ -0.2
PTCHD3P3-201ENST00000403073 TCF19Q9Y242 345 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms