RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 CLDN20P56880 219 aa9.75□□□□□ -0.85
CACNA1C-217ENST00000399641 HIST1H1AQ02539 215 aaPredicted RBP9.75□□□□□ -0.85
CACNA1C-217ENST00000399641 ZNF385CQ66K41 422 aaPredicted RBP9.75□□□□□ -0.85
CACNA1C-217ENST00000399641 C1orf162Q8NEQ5 155 aaPredicted RBP9.75□□□□□ -0.85
CACNA1C-217ENST00000399641 MMP25Q9NPA2 562 aa9.75□□□□□ -0.85
CACNA1C-217ENST00000399641 CLDN10P78369 228 aa9.75□□□□□ -0.85
CACNA1C-217ENST00000399641 MRPS11P82912 194 aaKnown RBP9.75□□□□□ -0.85
CACNA1C-217ENST00000399641 AQP6Q13520 282 aa9.75□□□□□ -0.85
CACNA1C-217ENST00000399641 C12orf54Q6X4T0 127 aa9.75□□□□□ -0.85
CACNA1C-217ENST00000399641 OR2K2Q8NGT1 345 aa9.75□□□□□ -0.85
CACNA1C-217ENST00000399641 SORT1Q99523 831 aa9.75□□□□□ -0.85
CACNA1C-217ENST00000399641 PAXXQ9BUH6 204 aa9.75□□□□□ -0.85
CACNA1C-217ENST00000399641 SPNS1Q9H2V7 528 aa9.75□□□□□ -0.85
CACNA1C-217ENST00000399641 METRNQ9UJH8 293 aa9.75□□□□□ -0.85
CACNA1C-217ENST00000399641 ARFGEF2Q9Y6D5 1785 aa9.75□□□□□ -0.85
CACNA1C-217ENST00000399641 TMEM272A0A1B0GTI8 110 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 GDF9O60383 454 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 NKG7Q16617 165 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 FAM209BQ5JX69 171 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 HCP5Q6MZN7 132 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 RTN4RL2Q86UN3 420 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 C3orf56Q8N813 242 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 WFDC12Q8WWY7 111 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 DUX3Q96PT4 197 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 NUDT16L1Q9BRJ7 211 aaKnown RBP9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 GTSF1LQ9H1H1 148 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 RNF7Q9UBF6 113 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 A0A0U1RQV5 110 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 FCMRO60667 390 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 CELA2BP08218 269 aaPredicted RBP9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 EGR1P18146 543 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 RAB9AP51151 201 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 STARD6P59095 220 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 PFN3P60673 137 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 PPP1R1AQ13522 171 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 SLC52A3Q9NQ40 469 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 LHBP01229 141 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 CDKN2AP42771 156 aaKnown RBP9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 C3orf36Q3SXR2 165 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 ZNF774Q6NX45 483 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 FUNDC1Q8IVP5 155 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 C2orf88Q9BSF0 95 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 A4GALTQ9NPC4 353 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 TRDV1A0A1B0GX56 115 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 PRSS37A4D1T9 235 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 A8MWL6 223 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 LPAR3Q9UBY5 353 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 HSPB7Q9UBY9 170 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 OR51B2Q9Y5P1 312 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 CXorf66Q5JRM2 361 aaPredicted RBP9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 SH2D5Q6ZV89 423 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 CADM3Q8N126 398 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 C4orf45Q96LM5 186 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 FOXJ2Q9P0K8 574 aa9.74□□□□□ -0.85
CACNA1C-217ENST00000399641 RER1O15258 196 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 CRPP02741 224 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 KIRREL2Q6UWL6 708 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 KIR3DL3Q8N743 410 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 OR10S1Q8NGN2 331 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 S4R3C0 116 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 BAZ2AQ9UIF9 1905 aaKnown RBP9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 NTN1O95631 604 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 C1orf53Q5VUE5 145 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 Q6ZNX1 250 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 SHISA5Q8N114 240 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 RAB24Q969Q5 203 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 SDF2Q99470 211 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 DNAJC4Q9NNZ3 241 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 MFAP2P55001 183 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 DLEU7Q6UYE1 221 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 TP53I13Q8NBR0 393 aaPredicted RBP9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 SIGLEC11Q96RL6 698 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 TNFRSF18Q9Y5U5 241 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 ARNTLO00327 626 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 FAM106CPP0CH98 169 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 C1orf220Q5T0J3 134 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 ZNF600Q6ZNG1 722 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 NANOGP1Q8N7R0 232 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 OPN3Q9H1Y3 402 aaPredicted RBP9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 CXCL16Q9H2A7 254 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 SERGEFQ9UGK8 458 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 LAMTOR3Q9UHA4 124 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 PDE4DIPQ5VU43 2346 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 MYH13Q9UKX3 1938 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 ASPDHA6ND91 283 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 CD8AP01732 235 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 YBX1P67809 324 aaKnown RBP9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 ANXA2RQ3ZCQ2 193 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 SLC25A53Q5H9E4 307 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 SVIPQ8NHG7 77 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 NEURL3Q96EH8 262 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 RNF115Q9Y4L5 304 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 TMEM56-RWDD3S4R434 201 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 NUP188Q5SRE5 1749 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 KDM3BQ7LBC6 1761 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 KIF13AQ9H1H9 1805 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 SEC11BP0C7V7 166 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 FAHD1Q6P587 224 aa9.73□□□□□ -0.85
CACNA1C-217ENST00000399641 TMEM174Q8WUU8 243 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms