RNA–Protein interactions for RNA: ENST00000399273.5

CCDC144A-206, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC144A, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-206ENST00000399273 MRGPRFQ96AM1 343 aa10.15□□□□□ -0.78
CCDC144A-206ENST00000399273 RAB37Q96AX2 223 aa10.15□□□□□ -0.78
CCDC144A-206ENST00000399273 EAF1Q96JC9 268 aaPredicted RBP10.15□□□□□ -0.78
CCDC144A-206ENST00000399273 PPYP01298 95 aa10.15□□□□□ -0.78
CCDC144A-206ENST00000399273 APCSP02743 223 aa10.15□□□□□ -0.78
CCDC144A-206ENST00000399273 CT62P0C5K7 136 aa10.15□□□□□ -0.78
CCDC144A-206ENST00000399273 FAM157CP0CG43 387 aa10.15□□□□□ -0.78
CCDC144A-206ENST00000399273 BTF3P20290 206 aaKnown RBP10.15□□□□□ -0.78
CCDC144A-206ENST00000399273 IGFBP6P24592 240 aaPredicted RBP10.15□□□□□ -0.78
CCDC144A-206ENST00000399273 SURF2Q15527 256 aaPredicted RBP10.15□□□□□ -0.78
CCDC144A-206ENST00000399273 HIST3H3Q16695 136 aa10.15□□□□□ -0.78
CCDC144A-206ENST00000399273 C17orf47Q8NEP4 570 aa10.15□□□□□ -0.78
CCDC144A-206ENST00000399273 PAXXQ9BUH6 204 aa10.15□□□□□ -0.78
CCDC144A-206ENST00000399273 WDR34Q96EX3 536 aa10.15□□□□□ -0.78
CCDC144A-206ENST00000399273 PHYHIPLQ96FC7 376 aa10.15□□□□□ -0.78
CCDC144A-206ENST00000399273 Q9N2K0 584 aa10.15□□□□□ -0.78
CCDC144A-206ENST00000399273 SMAD7O15105 426 aaKnown RBP10.15□□□□□ -0.79
CCDC144A-206ENST00000399273 MPC2O95563 127 aa10.15□□□□□ -0.79
CCDC144A-206ENST00000399273 RELQ04864 619 aaPredicted RBP10.15□□□□□ -0.79
CCDC144A-206ENST00000399273 OR2T10Q8NGZ9 312 aa10.15□□□□□ -0.79
CCDC144A-206ENST00000399273 RAB32Q13637 225 aa10.15□□□□□ -0.79
CCDC144A-206ENST00000399273 PRSS8Q16651 343 aa10.15□□□□□ -0.79
CCDC144A-206ENST00000399273 ISXQ2M1V0 245 aa10.15□□□□□ -0.79
CCDC144A-206ENST00000399273 WDR25Q64LD2 544 aaPredicted RBP10.15□□□□□ -0.79
CCDC144A-206ENST00000399273 GAPTQ8N292 157 aa10.15□□□□□ -0.79
CCDC144A-206ENST00000399273 WIPI2Q9Y4P8 454 aa10.15□□□□□ -0.79
CCDC144A-206ENST00000399273 PTPRFP10586 1907 aa10.15□□□□□ -0.79
CCDC144A-206ENST00000399273 IGKV3D-15A0A087WSY6 115 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 LOC389332A0A1B0GUA5 103 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 PRR19A6NJB7 356 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 IGKV3-15P01624 115 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 ZNF137PP52743 207 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 HYPMO75409 117 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 COX6CP09669 75 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 COMPP49747 757 aaPredicted RBP10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 ZNF256Q9Y2P7 627 aaPredicted RBP10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 PATE3B3GLJ2 98 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 ZP3P21754 424 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 B2MP61769 119 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 C12orf57Q99622 126 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 ANGPTL4Q9BY76 406 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 CEACAM18A8MTB9 384 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 C19orf48Q6RUI8 117 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 CBLN3Q6UW01 205 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 METTL1Q9UBP6 276 aaKnown RBP10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 POLR2GP62487 172 aaKnown RBP eCLIP10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 ATP5G2Q06055 141 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 ABHD14BQ96IU4 210 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 VAX2Q9UIW0 290 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 CLDN14O95500 239 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 PMS2CLQ68D20 193 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 CD300LDQ6UXZ3 194 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 B4DEV8 164 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 ALX3O95076 343 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 TNFSF10P50591 281 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 PIGYQ3MUY2 71 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 CLRN3Q8NCR9 226 aa10.14□□□□□ -0.79
CCDC144A-206ENST00000399273 FOXH1O75593 365 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 PPP1R17O96001 155 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 NAT2P11245 290 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 GPA33Q99795 319 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 LPAR5Q9H1C0 372 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 FGF9P31371 208 aaPredicted RBP10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 WNT5AP41221 380 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 ERVS71-1P61550 626 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 KLRB1Q12918 225 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 FAM214BQ7L5A3 538 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 RPS4XP62701 263 aaKnown RBP10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 KLF9Q13886 244 aaPredicted RBP10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 TSPO2Q5TGU0 170 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 PRSS54Q6PEW0 395 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 PCSK4Q6UW60 755 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 SCNM1Q9BWG6 230 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 IGHV3-21A0A0B4J1V1 117 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 TMEM218A2RU14 115 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 SMIM18P0DKX4 95 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 CHST5Q9GZS9 411 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 COL11A2P13942 1736 aaPredicted RBP10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 UCP2P55851 309 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 ZNF502Q8TBZ5 544 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 GALNT14Q96FL9 552 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 NCKAP5O14513 1909 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 TRAV34A0A0B4J273 112 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 hCG_38984A0A1B0GV85 526 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 HINT1P49773 126 aaPredicted RBP10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 UCN2Q96RP3 112 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 LOC105371242A0A075B767 164 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 TMEM255AQ5JRV8 349 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 NSUN5P2Q63ZY6 315 aa10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 FOXD3Q9UJU5 478 aaPredicted RBP10.13□□□□□ -0.79
CCDC144A-206ENST00000399273 NUDT3O95989 172 aa10.12□□□□□ -0.79
CCDC144A-206ENST00000399273 PRSS2P07478 247 aa10.12□□□□□ -0.79
CCDC144A-206ENST00000399273 CSF2RBP32927 897 aa10.12□□□□□ -0.79
CCDC144A-206ENST00000399273 AANATQ16613 207 aa10.12□□□□□ -0.79
CCDC144A-206ENST00000399273 HLA-DRB5Q30154 266 aa10.12□□□□□ -0.79
CCDC144A-206ENST00000399273 MRM1Q6IN84 353 aaKnown RBP10.12□□□□□ -0.79
CCDC144A-206ENST00000399273 ATG4DQ86TL0 474 aaPredicted RBP10.12□□□□□ -0.79
CCDC144A-206ENST00000399273 MRPL30Q8TCC3 161 aaKnown RBP10.12□□□□□ -0.79
CCDC144A-206ENST00000399273 RSG1Q9BU20 258 aa10.12□□□□□ -0.79
CCDC144A-206ENST00000399273 ZFP30Q9Y2G7 519 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms