RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 LINC00574Q9H8X3 128 aa17.39■□□□□ 0.37
CPNE1-204ENST00000397443 MMP26Q9NRE1 261 aa17.39■□□□□ 0.37
CPNE1-204ENST00000397443 C14orf166Q9Y224 244 aaKnown RBP17.39■□□□□ 0.37
CPNE1-204ENST00000397443 A0A1W2PPH5 198 aa17.39■□□□□ 0.37
CPNE1-204ENST00000397443 DHFRP00374 187 aa17.39■□□□□ 0.37
CPNE1-204ENST00000397443 SLC25A16P16260 332 aa17.39■□□□□ 0.37
CPNE1-204ENST00000397443 USF1P22415 310 aaPredicted RBP17.39■□□□□ 0.37
CPNE1-204ENST00000397443 LY6G5BQ8NDX9 201 aa17.39■□□□□ 0.37
CPNE1-204ENST00000397443 OR2AK2Q8NG84 335 aa17.39■□□□□ 0.37
CPNE1-204ENST00000397443 SCGB3A2Q96PL1 93 aa17.39■□□□□ 0.37
CPNE1-204ENST00000397443 SEC22CQ9BRL7 303 aa17.39■□□□□ 0.37
CPNE1-204ENST00000397443 SLC31A2O15432 143 aa17.38■□□□□ 0.37
CPNE1-204ENST00000397443 ZNF134P52741 427 aa17.38■□□□□ 0.37
CPNE1-204ENST00000397443 CBX3Q13185 183 aa17.38■□□□□ 0.37
CPNE1-204ENST00000397443 ABCA11PQ4W5N1 156 aa17.38■□□□□ 0.37
CPNE1-204ENST00000397443 C4orf46Q504U0 113 aa17.38■□□□□ 0.37
CPNE1-204ENST00000397443 ZNF818PQ6ZRF7 136 aa17.38■□□□□ 0.37
CPNE1-204ENST00000397443 C11orf42Q8N5U0 333 aa17.38■□□□□ 0.37
CPNE1-204ENST00000397443 OR52B4Q8NGK2 314 aa17.38■□□□□ 0.37
CPNE1-204ENST00000397443 ABHD14BQ96IU4 210 aa17.38■□□□□ 0.37
CPNE1-204ENST00000397443 Q96MF0 132 aa17.38■□□□□ 0.37
CPNE1-204ENST00000397443 OR2D2Q9H210 308 aa17.38■□□□□ 0.37
CPNE1-204ENST00000397443 ZNRD1Q9P1U0 126 aa17.38■□□□□ 0.37
CPNE1-204ENST00000397443 SVEP1Q4LDE5 3571 aa17.38■□□□□ 0.37
CPNE1-204ENST00000397443 RNF223E7ERA6 249 aa17.37■□□□□ 0.37
CPNE1-204ENST00000397443 TNFSF12O43508 249 aa17.37■□□□□ 0.37
CPNE1-204ENST00000397443 YPEL1O60688 119 aa17.37■□□□□ 0.37
CPNE1-204ENST00000397443 IGHV1-8P0DP01 117 aa17.37■□□□□ 0.37
CPNE1-204ENST00000397443 GNRHRP30968 328 aa17.37■□□□□ 0.37
CPNE1-204ENST00000397443 ECI1P42126 302 aa17.37■□□□□ 0.37
CPNE1-204ENST00000397443 ZFAND1Q8TCF1 268 aa17.37■□□□□ 0.37
CPNE1-204ENST00000397443 YPEL2Q96QA6 119 aa17.37■□□□□ 0.37
CPNE1-204ENST00000397443 SIRT7Q9NRC8 400 aa17.37■□□□□ 0.37
CPNE1-204ENST00000397443 ALG5Q9Y673 324 aa17.37■□□□□ 0.37
CPNE1-204ENST00000397443 FOXH1O75593 365 aa17.37■□□□□ 0.37
CPNE1-204ENST00000397443 RGS11O94810 467 aa17.37■□□□□ 0.37
CPNE1-204ENST00000397443 PIGPP57054 158 aa17.37■□□□□ 0.37
CPNE1-204ENST00000397443 SURF2Q15527 256 aaPredicted RBP17.37■□□□□ 0.37
CPNE1-204ENST00000397443 SLC38A6Q8IZM9 456 aa17.37■□□□□ 0.37
CPNE1-204ENST00000397443 C17orf98A8MV24 154 aa17.36■□□□□ 0.37
CPNE1-204ENST00000397443 ENSAO43768 121 aaKnown RBP17.36■□□□□ 0.37
CPNE1-204ENST00000397443 VAMP1P23763 118 aa17.36■□□□□ 0.37
CPNE1-204ENST00000397443 RSRP1Q9BUV0 290 aa17.36■□□□□ 0.37
CPNE1-204ENST00000397443 A0A0A6YYJ9 748 aa17.35■□□□□ 0.37
CPNE1-204ENST00000397443 A8MXK9 166 aa17.35■□□□□ 0.37
CPNE1-204ENST00000397443 CTSDP07339 412 aaPredicted RBP17.35■□□□□ 0.37
CPNE1-204ENST00000397443 OR4E1P0C645 316 aa17.35■□□□□ 0.37
CPNE1-204ENST00000397443 UCP3P55916 312 aa17.35■□□□□ 0.37
CPNE1-204ENST00000397443 SLC25A42Q86VD7 318 aa17.35■□□□□ 0.37
CPNE1-204ENST00000397443 OR52M1Q8NGK5 317 aa17.35■□□□□ 0.37
CPNE1-204ENST00000397443 EDARADDQ8WWZ3 215 aa17.35■□□□□ 0.37
CPNE1-204ENST00000397443 TMEM230Q96A57 120 aa17.35■□□□□ 0.37
CPNE1-204ENST00000397443 ABHD14AQ9BUJ0 271 aa17.35■□□□□ 0.37
CPNE1-204ENST00000397443 SLC2A9Q9NRM0 540 aa17.35■□□□□ 0.37
CPNE1-204ENST00000397443 IGHV2-70DA0A0C4DH43 119 aa17.35■□□□□ 0.37
CPNE1-204ENST00000397443 COX7A1P24310 79 aa17.35■□□□□ 0.37
CPNE1-204ENST00000397443 RAG2P55895 527 aa17.35■□□□□ 0.37
CPNE1-204ENST00000397443 PPP1R1AQ13522 171 aa17.35■□□□□ 0.37
CPNE1-204ENST00000397443 CT45A1Q5HYN5 189 aa17.35■□□□□ 0.37
CPNE1-204ENST00000397443 KRTAP1-3Q8IUG1 177 aa17.35■□□□□ 0.37
CPNE1-204ENST00000397443 Q8N7P7 452 aa17.35■□□□□ 0.37
CPNE1-204ENST00000397443 OR10A7Q8NGE5 316 aa17.35■□□□□ 0.37
CPNE1-204ENST00000397443 CT45A3Q8NHU0 189 aa17.35■□□□□ 0.37
CPNE1-204ENST00000397443 TOLLIPQ9H0E2 274 aa17.35■□□□□ 0.37
CPNE1-204ENST00000397443 CREBBPQ92793 2442 aa17.35■□□□□ 0.37
CPNE1-204ENST00000397443 FLNBO75369 2602 aaKnown RBP17.34■□□□□ 0.37
CPNE1-204ENST00000397443 UBE2MP61081 183 aaKnown RBP17.34■□□□□ 0.37
CPNE1-204ENST00000397443 METTL11BQ5VVY1 283 aa17.34■□□□□ 0.37
CPNE1-204ENST00000397443 LPCAT3Q6P1A2 487 aa17.34■□□□□ 0.37
CPNE1-204ENST00000397443 BTNL3Q6UXE8 466 aa17.34■□□□□ 0.37
CPNE1-204ENST00000397443 GLDNQ6ZMI3 551 aaPredicted RBP17.34■□□□□ 0.37
CPNE1-204ENST00000397443 PDZD9Q8IXQ8 264 aa17.34■□□□□ 0.37
CPNE1-204ENST00000397443 AGMATQ9BSE5 352 aa17.34■□□□□ 0.37
CPNE1-204ENST00000397443 SESN1Q9Y6P5 492 aa17.34■□□□□ 0.37
CPNE1-204ENST00000397443 TEX13DA0A0J9YY54 714 aaPredicted RBP17.33■□□□□ 0.37
CPNE1-204ENST00000397443 hCG_1809904A0A1W2PP81 198 aa17.33■□□□□ 0.37
CPNE1-204ENST00000397443 A0A1W2PPE2 198 aa17.33■□□□□ 0.37
CPNE1-204ENST00000397443 A0A1W2PR64 198 aa17.33■□□□□ 0.37
CPNE1-204ENST00000397443 A0A1W2PRV1 198 aa17.33■□□□□ 0.37
CPNE1-204ENST00000397443 GPR31O00270 319 aa17.33■□□□□ 0.37
CPNE1-204ENST00000397443 HLA-AP01891 365 aaKnown RBP17.33■□□□□ 0.37
CPNE1-204ENST00000397443 PAX2Q02962 417 aa17.33■□□□□ 0.37
CPNE1-204ENST00000397443 CASTOR1Q8WTX7 329 aa17.33■□□□□ 0.37
CPNE1-204ENST00000397443 RTN4IP1Q8WWV3 396 aaPredicted RBP17.33■□□□□ 0.37
CPNE1-204ENST00000397443 REG4Q9BYZ8 158 aa17.33■□□□□ 0.37
CPNE1-204ENST00000397443 TMEM133Q9H2Q1 129 aa17.33■□□□□ 0.37
CPNE1-204ENST00000397443 PRR13Q9NZ81 148 aa17.33■□□□□ 0.37
CPNE1-204ENST00000397443 ZNF221Q9UK13 617 aa17.33■□□□□ 0.37
CPNE1-204ENST00000397443 A0A096LNT2 108 aa17.33■□□□□ 0.36
CPNE1-204ENST00000397443 IGLV2-14P01704 120 aa17.33■□□□□ 0.36
CPNE1-204ENST00000397443 GPR12P47775 334 aa17.33■□□□□ 0.36
CPNE1-204ENST00000397443 SLC9A3R2Q15599 337 aa17.33■□□□□ 0.36
CPNE1-204ENST00000397443 TMEM30BQ3MIR4 351 aa17.33■□□□□ 0.36
CPNE1-204ENST00000397443 LYG1Q8N1E2 194 aa17.33■□□□□ 0.36
CPNE1-204ENST00000397443 ABHD12Q8N2K0 398 aa17.33■□□□□ 0.36
CPNE1-204ENST00000397443 DRAM1Q8N682 238 aa17.33■□□□□ 0.36
CPNE1-204ENST00000397443 WFDC11Q8NEX6 87 aa17.33■□□□□ 0.36
CPNE1-204ENST00000397443 IFI27L2Q9H2X8 130 aa17.33■□□□□ 0.36
CPNE1-204ENST00000397443 ITPR3Q14573 2671 aa17.32■□□□□ 0.36
CPNE1-204ENST00000397443 MECP2P51608 486 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms