RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 EYSQ5T1H1 3165 aa7.83□□□□□ -1.16
CAPN3-206ENST00000397163 SPTBN5Q9NRC6 3674 aaKnown RBP7.83□□□□□ -1.16
CAPN3-206ENST00000397163 SDK2Q58EX2 2172 aa7.83□□□□□ -1.16
CAPN3-206ENST00000397163 OR6C6A6NF89 314 aa7.83□□□□□ -1.16
CAPN3-206ENST00000397163 CBY3A6NI87 242 aa7.83□□□□□ -1.16
CAPN3-206ENST00000397163 C2CD4DB7Z1M9 353 aa7.83□□□□□ -1.16
CAPN3-206ENST00000397163 H7BYZ3 331 aa7.83□□□□□ -1.16
CAPN3-206ENST00000397163 HNF1AP20823 631 aa7.83□□□□□ -1.16
CAPN3-206ENST00000397163 F2RP25116 425 aa7.83□□□□□ -1.16
CAPN3-206ENST00000397163 CDKN1AP38936 164 aa7.83□□□□□ -1.16
CAPN3-206ENST00000397163 MDH2P40926 338 aaKnown RBP7.83□□□□□ -1.16
CAPN3-206ENST00000397163 DAZAP2Q15038 168 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-206ENST00000397163 MMDQ15546 238 aa7.83□□□□□ -1.16
CAPN3-206ENST00000397163 ZNF468Q5VIY5 522 aaPredicted RBP7.83□□□□□ -1.16
CAPN3-206ENST00000397163 SLC25A45Q8N413 288 aa7.83□□□□□ -1.16
CAPN3-206ENST00000397163 SRXN1Q9BYN0 137 aa7.83□□□□□ -1.16
CAPN3-206ENST00000397163 PSENENQ9NZ42 101 aa7.83□□□□□ -1.16
CAPN3-206ENST00000397163 NAT8Q9UHE5 227 aa7.83□□□□□ -1.16
CAPN3-206ENST00000397163 ZNF391Q9UJN7 358 aa7.83□□□□□ -1.16
CAPN3-206ENST00000397163 RARRES3Q9UL19 164 aa7.83□□□□□ -1.16
CAPN3-206ENST00000397163 WDR87Q6ZQQ6 2873 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 CCL25O15444 150 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 ZNF737O75373 536 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 CCL3P10147 92 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 BMP5P22003 454 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 PTTG1IPP53801 180 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 CLDN15P56746 228 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 TESK1Q15569 626 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 TMEM241Q24JQ0 296 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 FBXW9Q5XUX1 488 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 VN1R17PQ8TDU5 208 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 DNASE2BQ8WZ79 361 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 LHX4Q969G2 390 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 CACNG5Q9UF02 275 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 ABCA7Q8IZY2 2146 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 DIDO1Q9BTC0 2240 aaKnown RBP7.82□□□□□ -1.16
CAPN3-206ENST00000397163 LRRC3CA6NJW4 275 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 ZIC3O60481 467 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 TUSC2O75896 110 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 DKK1O94907 266 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 CTXN2P0C2S0 81 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 PSG2P11465 335 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 DSCR4P56555 118 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-206ENST00000397163 ARL16Q0P5N6 197 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 BSXQ3C1V8 233 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 AAED1Q7RTV5 226 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 GBGT1Q8N5D6 347 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 FGFBP3Q8TAT2 258 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 HS3ST6Q96QI5 342 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 OR2H1Q9GZK4 316 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 SLC39A9Q9NUM3 307 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 IL36RNQ9UBH0 155 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 IGKV1-6A0A0C4DH72 117 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 CD300LBA8K4G0 201 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 SYNGR2O43760 224 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 NAPSAO96009 420 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 PFN1P07737 140 aaKnown RBP7.82□□□□□ -1.16
CAPN3-206ENST00000397163 LIFP15018 202 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 CCNOP22674 350 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 GCH1P30793 250 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 CEACAM16Q2WEN9 425 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 ZNF295-AS1Q8N0V1 137 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 ZNF525Q8N782 197 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 FOXB1Q99853 325 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 AKIRIN1Q9H9L7 192 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-206ENST00000397163 PRUNE2Q8WUY3 3088 aa7.82□□□□□ -1.16
CAPN3-206ENST00000397163 C20orf202A1L168 122 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 M0QZK8 103 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 ZNHIT1O43257 154 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 GGCTO75223 188 aaKnown RBP7.81□□□□□ -1.16
CAPN3-206ENST00000397163 OR10J1P30954 320 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 NTF4P34130 210 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 HBG1P69891 147 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 HBG2P69892 147 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 MAJINQ3KP22 176 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 TMEM41BQ5BJD5 291 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 Q6ZRM9 215 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 Q6ZS49 121 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 TCF23Q7RTU1 214 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 OR56B2PQ8NGI1 322 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 TECTBQ96PL2 329 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 PSMG3Q9BT73 122 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-206ENST00000397163 ATP23Q9Y6H3 246 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 NCOR1O75376 2440 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 M0QZ24 198 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 ZNF16P17020 682 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-206ENST00000397163 CHRNA7P36544 502 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 GPM6AP51674 278 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 CNN1P51911 297 aaKnown RBP7.81□□□□□ -1.16
CAPN3-206ENST00000397163 RAC1P63000 192 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 SERF2P84101 59 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 SPANXN5Q5MJ07 72 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 CYP2G1PQ6ZSU1 146 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 CPT1CQ8TCG5 803 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 TMEM170AQ8WVE7 144 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 IL1F10Q8WWZ1 152 aa7.81□□□□□ -1.16
CAPN3-206ENST00000397163 ERRFI1Q9UJM3 462 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-206ENST00000397163 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 A0A0U1RQK1 487 aa7.8□□□□□ -1.16
CAPN3-206ENST00000397163 UBE2L5PA0A1B0GUS4 154 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms