RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 SH3BGRL3Q9H299 93 aa13.52□□□□□ -0.25
GNE-202ENST00000396594 NIT2Q9NQR4 276 aa13.52□□□□□ -0.25
GNE-202ENST00000396594 KIAA0100Q14667 2235 aaKnown RBP13.51□□□□□ -0.25
GNE-202ENST00000396594 STAG3L2P0CL84 134 aa13.51□□□□□ -0.25
GNE-202ENST00000396594 LRRC75BQ2VPJ9 315 aa13.51□□□□□ -0.25
GNE-202ENST00000396594 NECAP1Q8NC96 275 aa13.51□□□□□ -0.25
GNE-202ENST00000396594 METTL26Q96S19 204 aa13.51□□□□□ -0.25
GNE-202ENST00000396594 CISD1Q9NZ45 108 aaKnown RBP13.51□□□□□ -0.25
GNE-202ENST00000396594 ARG1P05089 322 aa13.51□□□□□ -0.25
GNE-202ENST00000396594 ORM2P19652 201 aa13.51□□□□□ -0.25
GNE-202ENST00000396594 GFRA1P56159 465 aa13.51□□□□□ -0.25
GNE-202ENST00000396594 C5orf17Q8NAS9 161 aa13.51□□□□□ -0.25
GNE-202ENST00000396594 FCN1O00602 326 aa13.51□□□□□ -0.25
GNE-202ENST00000396594 CD1BP29016 333 aa13.51□□□□□ -0.25
GNE-202ENST00000396594 RPL8P62917 257 aaKnown RBP13.51□□□□□ -0.25
GNE-202ENST00000396594 RELQ04864 619 aaPredicted RBP13.51□□□□□ -0.25
GNE-202ENST00000396594 TMUB1Q9BVT8 246 aa13.51□□□□□ -0.25
GNE-202ENST00000396594 FSCN3Q9NQT6 498 aa13.51□□□□□ -0.25
GNE-202ENST00000396594 DOCK5Q9H7D0 1870 aa13.51□□□□□ -0.25
GNE-202ENST00000396594 POLR2AP24928 1970 aaKnown RBP13.51□□□□□ -0.25
GNE-202ENST00000396594 ODAMA1E959 279 aa13.51□□□□□ -0.25
GNE-202ENST00000396594 OR2H2O95918 312 aa13.51□□□□□ -0.25
GNE-202ENST00000396594 RBM14Q96PK6 669 aaKnown RBP13.51□□□□□ -0.25
GNE-202ENST00000396594 ZNF703Q9H7S9 590 aaPredicted RBP13.51□□□□□ -0.25
GNE-202ENST00000396594 ZNF430Q9H8G1 570 aaPredicted RBP13.51□□□□□ -0.25
GNE-202ENST00000396594 SLC25A22Q9H936 323 aa13.51□□□□□ -0.25
GNE-202ENST00000396594 LOC102723971A0A1B0GUV8 181 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 CDRT15L2A8MXV6 281 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 TSPOP30536 169 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 ZNF146Q15072 292 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 PSG5Q15238 335 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 FAM78BQ5VT40 261 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 OR4P4Q8NGL7 312 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 MRPL24Q96A35 216 aaKnown RBP13.5□□□□□ -0.25
GNE-202ENST00000396594 TUBD1Q9UJT1 453 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 PTTG1IPP53801 180 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 RND3P61587 244 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 FAM57AQ8TBR7 257 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 Q96M66 194 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 PSME4Q14997 1843 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 HELTA6NFD8 242 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 NPIPB9F8W1W9 429 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 CD74P04233 296 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 PIGYQ3MUY2 71 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 EBLN2Q6P2I7 272 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 C16orf82Q7Z2V1 217 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 ST6GAL2Q96JF0 529 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 GSX1Q9H4S2 264 aaPredicted RBP13.5□□□□□ -0.25
GNE-202ENST00000396594 CALYQ9NYX4 217 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 MFAP4P55083 255 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 CYB5R2Q6BCY4 276 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 GLCCI1Q86VQ1 547 aa13.5□□□□□ -0.25
GNE-202ENST00000396594 ADRA2AP08913 450 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 KIR2DL2P43627 348 aaPredicted RBP13.49□□□□□ -0.25
GNE-202ENST00000396594 TNFSF10P50591 281 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 C3AR1Q16581 482 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 PSMG4Q5JS54 123 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 OTPQ5XKR4 325 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 LHFPL6Q9Y693 200 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 SIPA1L1O43166 1804 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 MYO9BQ13459 2157 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 NKX2-6A6NCS4 301 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 FAM106AQ4KMX7 169 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 DGAT2L7PQ6IED9 249 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 BVESQ8NE79 360 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 MRGPRFQ96AM1 343 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 KLK13Q9UKR3 277 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 C17orf51A8MQB3 221 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 SULT1A2P50226 295 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 HSPE1P61604 102 aaKnown RBP13.49□□□□□ -0.25
GNE-202ENST00000396594 CLEC7AQ9BXN2 247 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 OPN3Q9H1Y3 402 aaPredicted RBP13.49□□□□□ -0.25
GNE-202ENST00000396594 TREM2Q9NZC2 230 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 DLK1P80370 383 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 SSX7Q7RTT5 188 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 OR4C13Q8NGP0 309 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 PAXXQ9BUH6 204 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 TM2D1Q9BX74 207 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 LTBP1Q14766 1721 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 PATJQ8NI35 1801 aa13.49□□□□□ -0.25
GNE-202ENST00000396594 COL8A1P27658 744 aa13.48□□□□□ -0.25
GNE-202ENST00000396594 STARD4Q96DR4 205 aa13.48□□□□□ -0.25
GNE-202ENST00000396594 SMIM8Q96KF7 97 aa13.48□□□□□ -0.25
GNE-202ENST00000396594 NPDC1Q9NQX5 325 aaPredicted RBP13.48□□□□□ -0.25
GNE-202ENST00000396594 C9orf62Q8N4C0 152 aa13.48□□□□□ -0.25
GNE-202ENST00000396594 GTF3AQ92664 365 aaKnown RBP13.48□□□□□ -0.25
GNE-202ENST00000396594 A8MWL6 223 aa13.48□□□□□ -0.25
GNE-202ENST00000396594 PSG2P11465 335 aa13.48□□□□□ -0.25
GNE-202ENST00000396594 HNRNPA3P51991 378 aaKnown RBP13.48□□□□□ -0.25
GNE-202ENST00000396594 ITLN1Q8WWA0 313 aa13.48□□□□□ -0.25
GNE-202ENST00000396594 GPA33Q99795 319 aa13.48□□□□□ -0.25
GNE-202ENST00000396594 EPOPA6NHQ4 379 aa13.48□□□□□ -0.25
GNE-202ENST00000396594 F5H697 171 aa13.48□□□□□ -0.25
GNE-202ENST00000396594 KLF4O43474 513 aa13.48□□□□□ -0.25
GNE-202ENST00000396594 HSPB1P04792 205 aaKnown RBP13.48□□□□□ -0.25
GNE-202ENST00000396594 PPP1CCP36873 323 aaKnown RBP13.48□□□□□ -0.25
GNE-202ENST00000396594 NANOS3P60323 173 aaKnown RBP13.48□□□□□ -0.25
GNE-202ENST00000396594 GAMTQ14353 236 aa13.48□□□□□ -0.25
GNE-202ENST00000396594 GBGT1Q8N5D6 347 aa13.48□□□□□ -0.25
GNE-202ENST00000396594 OR10J6PQ8NGY7 276 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms