RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 PGAM2P15259 253 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 NELFEP18615 380 aaKnown RBP3.7□□□□□ -1.82
GABPB1-204ENST00000396464 GLRXP35754 106 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 POLR2IP36954 125 aaKnown RBP3.7□□□□□ -1.82
GABPB1-204ENST00000396464 RPS24P62847 133 aaKnown RBP3.7□□□□□ -1.82
GABPB1-204ENST00000396464 GNB1P62873 340 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 HLA-DRB3P79483 266 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 LY6DQ14210 128 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 PAFAH1B3Q15102 231 aaKnown RBP3.7□□□□□ -1.82
GABPB1-204ENST00000396464 EBPQ15125 230 aaKnown RBP3.7□□□□□ -1.82
GABPB1-204ENST00000396464 FBXL19-AS1Q494R0 122 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 COA6Q5JTJ3 125 aaKnown RBP3.7□□□□□ -1.82
GABPB1-204ENST00000396464 SAMD13Q5VXD3 122 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 LCN8Q6JVE9 175 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 NANOGP8Q6NSW7 305 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 RPL13AP3Q6NVV1 102 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 ARL9Q6T311 187 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 C2orf66Q6UXQ4 117 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 Q6ZRU5 148 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 FAM19A3Q7Z5A8 133 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 OOSP2Q86WS3 158 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 OR2M7Q8NG81 312 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 OR5J2Q8NH18 312 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 OR10G6Q8NH81 332 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 JOSD2Q8TAC2 188 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 SLC35G5Q96KT7 338 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 ZNF649Q9BS31 505 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 SLC25A2Q9BXI2 301 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 RSPO3Q9BXY4 272 aaPredicted RBP3.7□□□□□ -1.82
GABPB1-204ENST00000396464 MRPL20Q9BYC9 149 aaKnown RBP3.7□□□□□ -1.82
GABPB1-204ENST00000396464 NANOGQ9H9S0 305 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 MARCH5Q9NX47 278 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 RASL12Q9NYN1 266 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 JPT1Q9UK76 154 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 PRNDQ9UKY0 176 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 INSIG2Q9Y5U4 225 aa3.7□□□□□ -1.82
GABPB1-204ENST00000396464 IQGAP1P46940 1657 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 NPHP4O75161 1426 aaPredicted RBP3.69□□□□□ -1.82
GABPB1-204ENST00000396464 A0A087X002 238 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 hADV38S2A0JD32 116 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 INMT-MINDY4F8WBC2 141 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 TNFSF13O75888 250 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 CTLA4P16410 223 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 ERP29P30040 261 aaKnown RBP3.69□□□□□ -1.82
GABPB1-204ENST00000396464 RPL23P62829 140 aaKnown RBP3.69□□□□□ -1.82
GABPB1-204ENST00000396464 GNG5P63218 68 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 FABP5Q01469 135 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 MEF2CQ06413 473 aaPredicted RBP3.69□□□□□ -1.82
GABPB1-204ENST00000396464 TMEM267Q0VDI3 215 aaPredicted RBP3.69□□□□□ -1.82
GABPB1-204ENST00000396464 ERCC8Q13216 396 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 SMIM21Q3B7S5 101 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 ATP6AP1LQ52LC2 224 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 KLHL12Q53G59 568 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 AKR1C8PQ5T2L2 129 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 HENMT1Q5T8I9 393 aaKnown RBP3.69□□□□□ -1.82
GABPB1-204ENST00000396464 ZFP1Q6P2D0 407 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 VN1R4Q7Z5H5 301 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 HSD17B13Q7Z5P4 300 aaPredicted RBP3.69□□□□□ -1.82
GABPB1-204ENST00000396464 NR2C2APQ86WQ0 139 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 OSR2Q8N2R0 312 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 DEFB125Q8N687 156 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 OR5K1Q8NHB7 308 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 ZNRF2Q8NHG8 242 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 DCAKDQ8WVC6 231 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 PYURFQ96I23 114 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 SLC45A3Q96JT2 553 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 DNAJC30Q96LL9 226 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 C1orf50Q9BV19 199 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 CCDC90BQ9GZT6 254 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 PTGES2Q9H7Z7 377 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 TAS2R1Q9NYW7 299 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 CTSZQ9UBR2 303 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 CACNG5Q9UF02 275 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 TMEM131LA2VDJ0 1609 aa3.69□□□□□ -1.82
GABPB1-204ENST00000396464 KDM5AP29375 1690 aaKnown RBP3.68□□□□□ -1.82
GABPB1-204ENST00000396464 ARHGAP31Q2M1Z3 1444 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 A2ML1A8K2U0 1454 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 IGLV8-61A0A075B6I0 122 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 CCL15-CCL14A0A0B4J2E2 113 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 M0R1X1 148 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 SLC17A3O00476 420 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 PEX7O00628 323 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 COPEO14579 308 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 PLA2G2AP14555 144 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 KLK2P20151 261 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 GADD45AP24522 165 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 GRB2P62993 217 aaKnown RBP3.68□□□□□ -1.82
GABPB1-204ENST00000396464 CCL15Q16663 113 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 ATAD3CQ5T2N8 411 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 TOMM20LQ6UXN7 152 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 GOLT1AQ6ZVE7 132 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 H2AFVQ71UI9 128 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 MOB1BQ7L9L4 216 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 C20orf196Q8IYI0 205 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 DRAM1Q8N682 238 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 OR11H6Q8NGC7 330 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 FAM151AQ8WW52 585 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 GHSRQ92847 366 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 SLC35E1Q96K37 410 aa3.68□□□□□ -1.82
GABPB1-204ENST00000396464 DOCK7Q96N67 2140 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms