RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 SC5DO75845 299 aa12.83□□□□□ -0.36
DDR1-229ENST00000396342 GSTP1P09211 210 aaKnown RBP12.83□□□□□ -0.36
DDR1-229ENST00000396342 PPP1CCP36873 323 aaKnown RBP12.83□□□□□ -0.36
DDR1-229ENST00000396342 LUMP51884 338 aaPredicted RBP12.83□□□□□ -0.36
DDR1-229ENST00000396342 F2RL1P55085 397 aa12.83□□□□□ -0.36
DDR1-229ENST00000396342 ADARB1P78563 741 aaKnown RBP12.83□□□□□ -0.36
DDR1-229ENST00000396342 ZNF616Q08AN1 781 aa12.83□□□□□ -0.36
DDR1-229ENST00000396342 AHSA2Q719I0 299 aa12.83□□□□□ -0.36
DDR1-229ENST00000396342 MOB1BQ7L9L4 216 aa12.83□□□□□ -0.36
DDR1-229ENST00000396342 ZNF439Q8NDP4 499 aa12.83□□□□□ -0.36
DDR1-229ENST00000396342 BPIFB6Q8NFQ5 453 aa12.83□□□□□ -0.36
DDR1-229ENST00000396342 OR52L2PQ8NGH6 319 aa12.83□□□□□ -0.36
DDR1-229ENST00000396342 PGLYRP3Q96LB9 341 aa12.83□□□□□ -0.36
DDR1-229ENST00000396342 YPEL2Q96QA6 119 aa12.83□□□□□ -0.36
DDR1-229ENST00000396342 HSPB9Q9BQS6 159 aa12.83□□□□□ -0.36
DDR1-229ENST00000396342 TMEM59Q9BXS4 323 aa12.83□□□□□ -0.36
DDR1-229ENST00000396342 OR51J1Q9H342 316 aa12.83□□□□□ -0.36
DDR1-229ENST00000396342 RIMS4Q9H426 269 aaPredicted RBP12.83□□□□□ -0.36
DDR1-229ENST00000396342 MGAT4AQ9UM21 535 aa12.83□□□□□ -0.36
DDR1-229ENST00000396342 ZNF256Q9Y2P7 627 aaPredicted RBP12.83□□□□□ -0.36
DDR1-229ENST00000396342 WSB1Q9Y6I7 421 aa12.83□□□□□ -0.36
DDR1-229ENST00000396342 MAGEA13PA6NCF6 341 aa12.82□□□□□ -0.36
DDR1-229ENST00000396342 H7C2Y5 167 aa12.82□□□□□ -0.36
DDR1-229ENST00000396342 RAB29O14966 203 aa12.82□□□□□ -0.36
DDR1-229ENST00000396342 LALBAP00709 142 aa12.82□□□□□ -0.36
DDR1-229ENST00000396342 HLA-DRB1P01911 266 aa12.82□□□□□ -0.36
DDR1-229ENST00000396342 PSMB8P28062 276 aa12.82□□□□□ -0.36
DDR1-229ENST00000396342 MC5RP33032 325 aa12.82□□□□□ -0.36
DDR1-229ENST00000396342 ZNF134P52741 427 aa12.82□□□□□ -0.36
DDR1-229ENST00000396342 MRPS15P82914 257 aaKnown RBP12.82□□□□□ -0.36
DDR1-229ENST00000396342 RBM48Q5RL73 367 aaKnown RBP12.82□□□□□ -0.36
DDR1-229ENST00000396342 ZNF429Q86V71 674 aa12.82□□□□□ -0.36
DDR1-229ENST00000396342 GAPTQ8N292 157 aa12.82□□□□□ -0.36
DDR1-229ENST00000396342 TCTEX1D1Q8N7M0 179 aa12.82□□□□□ -0.36
DDR1-229ENST00000396342 URM1Q9BTM9 101 aaKnown RBP12.82□□□□□ -0.36
DDR1-229ENST00000396342 MND1Q9BWT6 205 aa12.82□□□□□ -0.36
DDR1-229ENST00000396342 MBNL3Q9NUK0 354 aaKnown RBP12.82□□□□□ -0.36
DDR1-229ENST00000396342 PLEKHJ1Q9NW61 149 aa12.82□□□□□ -0.36
DDR1-229ENST00000396342 SCN3BQ9NY72 215 aa12.82□□□□□ -0.36
DDR1-229ENST00000396342 RPS11P62280 158 aaKnown RBP eCLIP12.81□□□□□ -0.36
DDR1-229ENST00000396342 GABPB1Q06547 395 aaPredicted RBP12.81□□□□□ -0.36
DDR1-229ENST00000396342 C5orf64Q2M2E5 130 aa12.81□□□□□ -0.36
DDR1-229ENST00000396342 ACSM3Q53FZ2 586 aa12.81□□□□□ -0.36
DDR1-229ENST00000396342 LY6G6FQ5SQ64 297 aa12.81□□□□□ -0.36
DDR1-229ENST00000396342 C6orf141Q5SZD1 244 aa12.81□□□□□ -0.36
DDR1-229ENST00000396342 FAM71F2Q6NXP2 309 aa12.81□□□□□ -0.36
DDR1-229ENST00000396342 EDARADDQ8WWZ3 215 aa12.81□□□□□ -0.36
DDR1-229ENST00000396342 PHYHIPQ92561 330 aa12.81□□□□□ -0.36
DDR1-229ENST00000396342 PRR25Q96S07 402 aa12.81□□□□□ -0.36
DDR1-229ENST00000396342 MRPL20Q9BYC9 149 aaKnown RBP12.81□□□□□ -0.36
DDR1-229ENST00000396342 ATP6V0E1O15342 81 aa12.8□□□□□ -0.36
DDR1-229ENST00000396342 RBBP9O75884 186 aa12.8□□□□□ -0.36
DDR1-229ENST00000396342 BPNT1O95861 308 aa12.8□□□□□ -0.36
DDR1-229ENST00000396342 ECSCRQ19T08 205 aa12.8□□□□□ -0.36
DDR1-229ENST00000396342 HSD17B12Q53GQ0 312 aa12.8□□□□□ -0.36
DDR1-229ENST00000396342 ZNF660Q6AZW8 331 aaPredicted RBP12.8□□□□□ -0.36
DDR1-229ENST00000396342 PYHIN1Q6K0P9 492 aa12.8□□□□□ -0.36
DDR1-229ENST00000396342 MRPL30Q8TCC3 161 aaKnown RBP12.8□□□□□ -0.36
DDR1-229ENST00000396342 OR5B12Q96R08 314 aa12.8□□□□□ -0.36
DDR1-229ENST00000396342 ANKRD60Q9BZ19 345 aa12.8□□□□□ -0.36
DDR1-229ENST00000396342 PLGRKTQ9HBL7 147 aa12.8□□□□□ -0.36
DDR1-229ENST00000396342 PSORS1C1Q9UIG5 152 aa12.8□□□□□ -0.36
DDR1-229ENST00000396342 SMAD5-AS1Q9Y6J3 95 aa12.8□□□□□ -0.36
DDR1-229ENST00000396342 OR5H14A6NHG9 310 aa12.79□□□□□ -0.36
DDR1-229ENST00000396342 OVOL1O14753 267 aa12.79□□□□□ -0.36
DDR1-229ENST00000396342 ARPC1BO15143 372 aaKnown RBP12.79□□□□□ -0.36
DDR1-229ENST00000396342 SAP30O75446 220 aa12.79□□□□□ -0.36
DDR1-229ENST00000396342 HTR2CP28335 458 aa12.79□□□□□ -0.36
DDR1-229ENST00000396342 BLVRBP30043 206 aaPredicted RBP12.79□□□□□ -0.36
DDR1-229ENST00000396342 RAB9AP51151 201 aa12.79□□□□□ -0.36
DDR1-229ENST00000396342 CFHR3Q02985 330 aa12.79□□□□□ -0.36
DDR1-229ENST00000396342 CBX3Q13185 183 aa12.79□□□□□ -0.36
DDR1-229ENST00000396342 GNMTQ14749 295 aa12.79□□□□□ -0.36
DDR1-229ENST00000396342 RCN1Q15293 331 aa12.79□□□□□ -0.36
DDR1-229ENST00000396342 FAM53AQ6NSI3 398 aaPredicted RBP12.79□□□□□ -0.36
DDR1-229ENST00000396342 ZNF833PQ6ZTB9 187 aa12.79□□□□□ -0.36
DDR1-229ENST00000396342 NABP2Q9BQ15 211 aa12.79□□□□□ -0.36
DDR1-229ENST00000396342 FAAP24Q9BTP7 215 aa12.79□□□□□ -0.36
DDR1-229ENST00000396342 TMED9Q9BVK6 235 aa12.79□□□□□ -0.36
DDR1-229ENST00000396342 PLCXD1Q9NUJ7 323 aa12.79□□□□□ -0.36
DDR1-229ENST00000396342 ZNF221Q9UK13 617 aa12.79□□□□□ -0.36
DDR1-229ENST00000396342 FOXA2Q9Y261 457 aaPredicted RBP12.79□□□□□ -0.36
DDR1-229ENST00000396342 SAA2-SAA4A0A096LPE2 208 aa12.78□□□□□ -0.36
DDR1-229ENST00000396342 A0A1W2PN81 502 aa12.78□□□□□ -0.36
DDR1-229ENST00000396342 SAA2P0DJI9 122 aaPredicted RBP12.78□□□□□ -0.36
DDR1-229ENST00000396342 VSIG8P0DPA2 414 aa12.78□□□□□ -0.36
DDR1-229ENST00000396342 ZBTB25P24278 435 aa12.78□□□□□ -0.36
DDR1-229ENST00000396342 CHRNA7P36544 502 aa12.78□□□□□ -0.36
DDR1-229ENST00000396342 VHLP40337 213 aa12.78□□□□□ -0.36
DDR1-229ENST00000396342 RPS27AP62979 156 aaKnown RBP12.78□□□□□ -0.36
DDR1-229ENST00000396342 RUNX1Q01196 453 aa12.78□□□□□ -0.36
DDR1-229ENST00000396342 CEACAM19Q7Z692 300 aa12.78□□□□□ -0.36
DDR1-229ENST00000396342 NANOGP1Q8N7R0 232 aa12.78□□□□□ -0.36
DDR1-229ENST00000396342 ZNF491Q8N8L2 437 aa12.78□□□□□ -0.36
DDR1-229ENST00000396342 NPBQ8NG41 125 aa12.78□□□□□ -0.36
DDR1-229ENST00000396342 FLYWCH2Q96CP2 140 aaKnown RBP12.78□□□□□ -0.36
DDR1-229ENST00000396342 TSNAXQ99598 290 aaKnown RBP12.78□□□□□ -0.36
DDR1-229ENST00000396342 ELOVL1Q9BW60 279 aa12.78□□□□□ -0.36
DDR1-229ENST00000396342 SLC23A1Q9UHI7 598 aa12.78□□□□□ -0.36
DDR1-229ENST00000396342 WASHC3Q9Y3C0 194 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms