RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 IL2RGP31785 369 aa14.08□□□□□ -0.16
NUP50-202ENST00000396096 TIMP3P35625 211 aa14.08□□□□□ -0.16
NUP50-202ENST00000396096 CFHR2P36980 270 aa14.08□□□□□ -0.16
NUP50-202ENST00000396096 SULT1A1P50225 295 aa14.08□□□□□ -0.16
NUP50-202ENST00000396096 GUK1Q16774 197 aa14.08□□□□□ -0.16
NUP50-202ENST00000396096 ZNF474Q6S9Z5 364 aaPredicted RBP14.08□□□□□ -0.16
NUP50-202ENST00000396096 STX12Q86Y82 276 aa14.08□□□□□ -0.16
NUP50-202ENST00000396096 UFSP2Q9NUQ7 469 aa14.08□□□□□ -0.16
NUP50-202ENST00000396096 COA4Q9NYJ1 87 aa14.08□□□□□ -0.16
NUP50-202ENST00000396096 CHD3Q12873 2000 aaKnown RBP14.08□□□□□ -0.16
NUP50-202ENST00000396096 SYNGR2O43760 224 aa14.08□□□□□ -0.16
NUP50-202ENST00000396096 DFFBO76075 338 aa14.08□□□□□ -0.16
NUP50-202ENST00000396096 NXPH3O95157 252 aa14.08□□□□□ -0.16
NUP50-202ENST00000396096 F12P00748 615 aaPredicted RBP14.08□□□□□ -0.16
NUP50-202ENST00000396096 TAS2R30P59541 319 aa14.08□□□□□ -0.16
NUP50-202ENST00000396096 COL10A1Q03692 680 aa14.08□□□□□ -0.16
NUP50-202ENST00000396096 SMUG1Q53HV7 270 aa14.08□□□□□ -0.16
NUP50-202ENST00000396096 KIAA2026Q5HYC2 2103 aa14.08□□□□□ -0.16
NUP50-202ENST00000396096 FAM90A1Q86YD7 464 aa14.08□□□□□ -0.16
NUP50-202ENST00000396096 RBMXL3Q8N7X1 1067 aaKnown RBP14.08□□□□□ -0.16
NUP50-202ENST00000396096 HIPK2Q9H2X6 1198 aa14.08□□□□□ -0.16
NUP50-202ENST00000396096 PRR14LQ5THK1 2151 aa14.08□□□□□ -0.16
NUP50-202ENST00000396096 FAM90A26D6RGX4 464 aa14.07□□□□□ -0.16
NUP50-202ENST00000396096 MSMPQ1L6U9 139 aa14.07□□□□□ -0.16
NUP50-202ENST00000396096 TRAT1Q6PIZ9 186 aa14.07□□□□□ -0.16
NUP50-202ENST00000396096 KDF1Q8NAX2 398 aaPredicted RBP14.07□□□□□ -0.16
NUP50-202ENST00000396096 OR52L2PQ8NGH6 319 aa14.07□□□□□ -0.16
NUP50-202ENST00000396096 FAM213BQ8TBF2 198 aa14.07□□□□□ -0.16
NUP50-202ENST00000396096 LRRC29Q8WV35 223 aa14.07□□□□□ -0.16
NUP50-202ENST00000396096 NDRG3Q9UGV2 375 aa14.07□□□□□ -0.16
NUP50-202ENST00000396096 SRRM5B3KS81 715 aa14.06□□□□□ -0.16
NUP50-202ENST00000396096 IGHV3-13P01766 116 aa14.06□□□□□ -0.16
NUP50-202ENST00000396096 GABRA2P47869 451 aa14.06□□□□□ -0.16
NUP50-202ENST00000396096 IZUMO4Q1ZYL8 232 aa14.06□□□□□ -0.16
NUP50-202ENST00000396096 KRBOX4Q5JUW0 171 aa14.06□□□□□ -0.16
NUP50-202ENST00000396096 SP5Q6BEB4 398 aaPredicted RBP14.06□□□□□ -0.16
NUP50-202ENST00000396096 TCTEX1D1Q8N7M0 179 aa14.06□□□□□ -0.16
NUP50-202ENST00000396096 S100PBPQ96BU1 408 aa14.06□□□□□ -0.16
NUP50-202ENST00000396096 PBDC1Q9BVG4 233 aa14.06□□□□□ -0.16
NUP50-202ENST00000396096 SMDT1Q9H4I9 107 aa14.06□□□□□ -0.16
NUP50-202ENST00000396096 METRNQ9UJH8 293 aa14.06□□□□□ -0.16
NUP50-202ENST00000396096 MMP24Q9Y5R2 645 aa14.06□□□□□ -0.16
NUP50-202ENST00000396096 BTBD17A6NE02 478 aa14.06□□□□□ -0.16
NUP50-202ENST00000396096 P0C879 139 aa14.06□□□□□ -0.16
NUP50-202ENST00000396096 ZNF16P17020 682 aaPredicted RBP14.06□□□□□ -0.16
NUP50-202ENST00000396096 ZNF83P51522 516 aa14.06□□□□□ -0.16
NUP50-202ENST00000396096 NKX6-1P78426 367 aaPredicted RBP14.06□□□□□ -0.16
NUP50-202ENST00000396096 HOXA4Q00056 320 aaPredicted RBP14.06□□□□□ -0.16
NUP50-202ENST00000396096 TMEM88Q6PEY1 159 aa14.06□□□□□ -0.16
NUP50-202ENST00000396096 DPPA3Q6W0C5 159 aa14.06□□□□□ -0.16
NUP50-202ENST00000396096 CD177Q8N6Q3 437 aa14.06□□□□□ -0.16
NUP50-202ENST00000396096 TMEM217Q8N7C4 229 aa14.06□□□□□ -0.16
NUP50-202ENST00000396096 NINJ1Q92982 152 aa14.06□□□□□ -0.16
NUP50-202ENST00000396096 C5orf30Q96GV9 206 aa14.06□□□□□ -0.16
NUP50-202ENST00000396096 SFXN3Q9BWM7 321 aa14.06□□□□□ -0.16
NUP50-202ENST00000396096 OR2D2Q9H210 308 aa14.06□□□□□ -0.16
NUP50-202ENST00000396096 HEATR1Q9H583 2144 aaKnown RBP14.06□□□□□ -0.16
NUP50-202ENST00000396096 ZNF737O75373 536 aa14.05□□□□□ -0.16
NUP50-202ENST00000396096 CEACAM8P31997 349 aaPredicted RBP14.05□□□□□ -0.16
NUP50-202ENST00000396096 GLRXP35754 106 aa14.05□□□□□ -0.16
NUP50-202ENST00000396096 GLIPR1P48060 266 aa14.05□□□□□ -0.16
NUP50-202ENST00000396096 HTD2P86397 168 aa14.05□□□□□ -0.16
NUP50-202ENST00000396096 KRTCAP3Q53RY4 240 aa14.05□□□□□ -0.16
NUP50-202ENST00000396096 CBLN2Q8IUK8 224 aa14.05□□□□□ -0.16
NUP50-202ENST00000396096 FGFRL1Q8N441 504 aa14.05□□□□□ -0.16
NUP50-202ENST00000396096 OR2Z1Q8NG97 314 aa14.05□□□□□ -0.16
NUP50-202ENST00000396096 MRGPRDQ8TDS7 321 aa14.05□□□□□ -0.16
NUP50-202ENST00000396096 TFF1P04155 84 aa14.04□□□□□ -0.16
NUP50-202ENST00000396096 PRDX2P32119 198 aa14.04□□□□□ -0.16
NUP50-202ENST00000396096 PPP1CCP36873 323 aaKnown RBP14.04□□□□□ -0.16
NUP50-202ENST00000396096 PPT1P50897 306 aa14.04□□□□□ -0.16
NUP50-202ENST00000396096 CATR1Q13166 79 aa14.04□□□□□ -0.16
NUP50-202ENST00000396096 HFEQ30201 348 aa14.04□□□□□ -0.16
NUP50-202ENST00000396096 FAM122CQ6P4D5 195 aa14.04□□□□□ -0.16
NUP50-202ENST00000396096 RPRMLQ8N4K4 120 aa14.04□□□□□ -0.16
NUP50-202ENST00000396096 OR13A1Q8NGR1 328 aa14.04□□□□□ -0.16
NUP50-202ENST00000396096 FAM216AQ8WUB2 273 aa14.04□□□□□ -0.16
NUP50-202ENST00000396096 RFNGQ9Y644 331 aa14.04□□□□□ -0.16
NUP50-202ENST00000396096 ZNF292O60281 2723 aa14.04□□□□□ -0.16
NUP50-202ENST00000396096 C15orf65H3BRN8 121 aa14.04□□□□□ -0.16
NUP50-202ENST00000396096 M0R1B8 84 aa14.04□□□□□ -0.16
NUP50-202ENST00000396096 KLK10O43240 276 aa14.04□□□□□ -0.16
NUP50-202ENST00000396096 CRYAAP02489 173 aa14.04□□□□□ -0.16
NUP50-202ENST00000396096 EGR1P18146 543 aa14.04□□□□□ -0.16
NUP50-202ENST00000396096 SPSB3Q6PJ21 355 aa14.04□□□□□ -0.16
NUP50-202ENST00000396096 LRP11Q86VZ4 500 aa14.04□□□□□ -0.16
NUP50-202ENST00000396096 FAM57AQ8TBR7 257 aa14.04□□□□□ -0.16
NUP50-202ENST00000396096 EIF5A2Q9GZV4 153 aaKnown RBP14.04□□□□□ -0.16
NUP50-202ENST00000396096 PSENENQ9NZ42 101 aa14.04□□□□□ -0.16
NUP50-202ENST00000396096 RNF150Q9ULK6 438 aa14.04□□□□□ -0.16
NUP50-202ENST00000396096 IGLV3-9A0A075B6K5 115 aa14.03□□□□□ -0.16
NUP50-202ENST00000396096 K7EM74 188 aa14.03□□□□□ -0.16
NUP50-202ENST00000396096 IFNA5P01569 189 aa14.03□□□□□ -0.16
NUP50-202ENST00000396096 ADH4P08319 380 aa14.03□□□□□ -0.16
NUP50-202ENST00000396096 RPL30P62888 115 aaKnown RBP14.03□□□□□ -0.16
NUP50-202ENST00000396096 TMEM267Q0VDI3 215 aaPredicted RBP14.03□□□□□ -0.16
NUP50-202ENST00000396096 CR1LQ2VPA4 569 aa14.03□□□□□ -0.16
NUP50-202ENST00000396096 ZNF66Q6ZN08 573 aa14.03□□□□□ -0.16
NUP50-202ENST00000396096 MUCL1Q96DR8 90 aa14.03□□□□□ -0.16
NUP50-202ENST00000396096 ABHD14AQ9BUJ0 271 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms