RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 ISOC1Q96CN7 298 aa16.28■□□□□ 0.2
TRAF4-203ENST00000394925 CYYR1Q96J86 154 aa16.28■□□□□ 0.2
TRAF4-203ENST00000394925 OR4C12Q96R67 309 aa16.28■□□□□ 0.2
TRAF4-203ENST00000394925 CST11Q9H112 138 aa16.28■□□□□ 0.2
TRAF4-203ENST00000394925 MRPS18AQ9NVS2 196 aaKnown RBP16.28■□□□□ 0.2
TRAF4-203ENST00000394925 RPL36Q9Y3U8 105 aaKnown RBP16.28■□□□□ 0.2
TRAF4-203ENST00000394925 A3GALT2U3KPV4 340 aa16.28■□□□□ 0.2
TRAF4-203ENST00000394925 UBE2QL1A1L167 161 aa16.27■□□□□ 0.2
TRAF4-203ENST00000394925 CIB2O75838 187 aa16.27■□□□□ 0.2
TRAF4-203ENST00000394925 IGHV3-11P01762 117 aa16.27■□□□□ 0.2
TRAF4-203ENST00000394925 IGHV4-30-4P0DP06 118 aa16.27■□□□□ 0.2
TRAF4-203ENST00000394925 OR3A3P47888 321 aa16.27■□□□□ 0.2
TRAF4-203ENST00000394925 C19orf54Q5BKX5 351 aa16.27■□□□□ 0.2
TRAF4-203ENST00000394925 GLIPR1L1Q6UWM5 242 aa16.27■□□□□ 0.2
TRAF4-203ENST00000394925 ADAMTSL5Q6ZMM2 481 aa16.27■□□□□ 0.2
TRAF4-203ENST00000394925 HAPLN4Q86UW8 402 aa16.27■□□□□ 0.2
TRAF4-203ENST00000394925 BANF2Q9H503 90 aa16.27■□□□□ 0.2
TRAF4-203ENST00000394925 EDA2RQ9HAV5 297 aa16.27■□□□□ 0.2
TRAF4-203ENST00000394925 KCNIP1Q9NZI2 227 aa16.27■□□□□ 0.2
TRAF4-203ENST00000394925 FOXA2Q9Y261 457 aaPredicted RBP16.27■□□□□ 0.2
TRAF4-203ENST00000394925 NDUFA3O95167 84 aa16.26■□□□□ 0.19
TRAF4-203ENST00000394925 OR2G6Q5TZ20 316 aa16.26■□□□□ 0.19
TRAF4-203ENST00000394925 MRPS24Q96EL2 167 aaKnown RBP16.26■□□□□ 0.19
TRAF4-203ENST00000394925 SELENOIQ9C0D9 397 aa16.26■□□□□ 0.19
TRAF4-203ENST00000394925 JPT1Q9UK76 154 aa16.26■□□□□ 0.19
TRAF4-203ENST00000394925 TRAV8-7A0A075B6U6 113 aa16.25■□□□□ 0.19
TRAF4-203ENST00000394925 CA11O75493 328 aa16.25■□□□□ 0.19
TRAF4-203ENST00000394925 SC5DO75845 299 aa16.25■□□□□ 0.19
TRAF4-203ENST00000394925 ETV1P50549 477 aa16.25■□□□□ 0.19
TRAF4-203ENST00000394925 CX3CL1P78423 397 aa16.25■□□□□ 0.19
TRAF4-203ENST00000394925 LRRC36Q1X8D7 754 aa16.25■□□□□ 0.19
TRAF4-203ENST00000394925 ZNF660Q6AZW8 331 aaPredicted RBP16.25■□□□□ 0.19
TRAF4-203ENST00000394925 ZNF833PQ6ZTB9 187 aa16.25■□□□□ 0.19
TRAF4-203ENST00000394925 Q8N1Y9 231 aa16.25■□□□□ 0.19
TRAF4-203ENST00000394925 JAGN1Q8N5M9 183 aa16.25■□□□□ 0.19
TRAF4-203ENST00000394925 ABHD5Q8WTS1 349 aa16.25■□□□□ 0.19
TRAF4-203ENST00000394925 FBXL15Q9H469 300 aa16.25■□□□□ 0.19
TRAF4-203ENST00000394925 FGF20Q9NP95 211 aaPredicted RBP16.25■□□□□ 0.19
TRAF4-203ENST00000394925 MBNL3Q9NUK0 354 aaKnown RBP16.25■□□□□ 0.19
TRAF4-203ENST00000394925 CKLFQ9UBR5 152 aa16.25■□□□□ 0.19
TRAF4-203ENST00000394925 TNCP24821 2201 aa16.25■□□□□ 0.19
TRAF4-203ENST00000394925 SAA2-SAA4A0A096LPE2 208 aa16.24■□□□□ 0.19
TRAF4-203ENST00000394925 OGG1O15527 345 aa16.24■□□□□ 0.19
TRAF4-203ENST00000394925 YPEL1O60688 119 aa16.24■□□□□ 0.19
TRAF4-203ENST00000394925 MAS1P04201 325 aa16.24■□□□□ 0.19
TRAF4-203ENST00000394925 HSPB1P04792 205 aaKnown RBP16.24■□□□□ 0.19
TRAF4-203ENST00000394925 SAA2P0DJI9 122 aaPredicted RBP16.24■□□□□ 0.19
TRAF4-203ENST00000394925 FUT3P21217 361 aa16.24■□□□□ 0.19
TRAF4-203ENST00000394925 CRIP2P52943 208 aaPredicted RBP16.24■□□□□ 0.19
TRAF4-203ENST00000394925 TMPRSS11AQ6ZMR5 421 aa16.24■□□□□ 0.19
TRAF4-203ENST00000394925 APH1BQ8WW43 257 aa16.24■□□□□ 0.19
TRAF4-203ENST00000394925 FLYWCH2Q96CP2 140 aaKnown RBP16.24■□□□□ 0.19
TRAF4-203ENST00000394925 SMIM19Q96E16 107 aa16.24■□□□□ 0.19
TRAF4-203ENST00000394925 YPEL2Q96QA6 119 aa16.24■□□□□ 0.19
TRAF4-203ENST00000394925 NUBP2Q9Y5Y2 271 aa16.24■□□□□ 0.19
TRAF4-203ENST00000394925 TRBV5-5A0A0J9YX44 114 aa16.23■□□□□ 0.19
TRAF4-203ENST00000394925 GPX5O75715 221 aa16.23■□□□□ 0.19
TRAF4-203ENST00000394925 ATP5HO75947 161 aa16.23■□□□□ 0.19
TRAF4-203ENST00000394925 EGR2P11161 476 aaPredicted RBP16.23■□□□□ 0.19
TRAF4-203ENST00000394925 MGMTP16455 207 aa16.23■□□□□ 0.19
TRAF4-203ENST00000394925 HTD2P86397 168 aa16.23■□□□□ 0.19
TRAF4-203ENST00000394925 PLGLAQ15195 96 aa16.23■□□□□ 0.19
TRAF4-203ENST00000394925 AWAT2Q6E213 333 aa16.23■□□□□ 0.19
TRAF4-203ENST00000394925 SIGIRRQ6IA17 410 aa16.23■□□□□ 0.19
TRAF4-203ENST00000394925 FAM131AQ6UXB0 335 aa16.23■□□□□ 0.19
TRAF4-203ENST00000394925 LYPD6Q86Y78 171 aa16.23■□□□□ 0.19
TRAF4-203ENST00000394925 SGPP2Q8IWX5 399 aa16.23■□□□□ 0.19
TRAF4-203ENST00000394925 TCTEX1D1Q8N7M0 179 aa16.23■□□□□ 0.19
TRAF4-203ENST00000394925 MRPL30Q8TCC3 161 aaKnown RBP16.23■□□□□ 0.19
TRAF4-203ENST00000394925 GHSRQ92847 366 aa16.23■□□□□ 0.19
TRAF4-203ENST00000394925 MS4A10Q96PG2 267 aa16.23■□□□□ 0.19
TRAF4-203ENST00000394925 RSRP1Q9BUV0 290 aa16.23■□□□□ 0.19
TRAF4-203ENST00000394925 ELOVL1Q9BW60 279 aa16.23■□□□□ 0.19
TRAF4-203ENST00000394925 C19orf73Q9NVV2 129 aa16.23■□□□□ 0.19
TRAF4-203ENST00000394925 BABAM2Q9NXR7 383 aa16.23■□□□□ 0.19
TRAF4-203ENST00000394925 LOC100130705A0A1B0GUX0 176 aa16.22■□□□□ 0.19
TRAF4-203ENST00000394925 A0A1W2PPK0 400 aa16.22■□□□□ 0.19
TRAF4-203ENST00000394925 FAM90A7PA6NKC0 464 aa16.22■□□□□ 0.19
TRAF4-203ENST00000394925 FAM90A23PA8MXZ1 464 aa16.22■□□□□ 0.19
TRAF4-203ENST00000394925 H3BNX3 289 aa16.22■□□□□ 0.19
TRAF4-203ENST00000394925 FCN1O00602 326 aa16.22■□□□□ 0.19
TRAF4-203ENST00000394925 RRHO14718 337 aa16.22■□□□□ 0.19
TRAF4-203ENST00000394925 HSPA12AO43301 675 aa16.22■□□□□ 0.19
TRAF4-203ENST00000394925 CRTAPO75718 401 aaPredicted RBP16.22■□□□□ 0.19
TRAF4-203ENST00000394925 RGS11O94810 467 aa16.22■□□□□ 0.19
TRAF4-203ENST00000394925 LALBAP00709 142 aa16.22■□□□□ 0.19
TRAF4-203ENST00000394925 GLAP06280 429 aa16.22■□□□□ 0.19
TRAF4-203ENST00000394925 TPPP2P59282 170 aa16.22■□□□□ 0.19
TRAF4-203ENST00000394925 TMEM267Q0VDI3 215 aaPredicted RBP16.22■□□□□ 0.19
TRAF4-203ENST00000394925 SMN1Q16637 294 aaKnown RBP16.22■□□□□ 0.19
TRAF4-203ENST00000394925 Q499Y3 187 aa16.22■□□□□ 0.19
TRAF4-203ENST00000394925 ZNF554Q86TJ5 538 aa16.22■□□□□ 0.19
TRAF4-203ENST00000394925 OR2AK2Q8NG84 335 aa16.22■□□□□ 0.19
TRAF4-203ENST00000394925 GALMQ96C23 342 aa16.22■□□□□ 0.19
TRAF4-203ENST00000394925 Q96M66 194 aa16.22■□□□□ 0.19
TRAF4-203ENST00000394925 RDH12Q96NR8 316 aa16.22■□□□□ 0.19
TRAF4-203ENST00000394925 FAM103A1Q9BTL3 118 aaKnown RBP16.22■□□□□ 0.19
TRAF4-203ENST00000394925 STUB1Q9UNE7 303 aa16.22■□□□□ 0.19
TRAF4-203ENST00000394925 HYDINQ4G0P3 5121 aa16.22■□□□□ 0.19
TRAF4-203ENST00000394925 ACTBL2Q562R1 376 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms