RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 OR2G3Q8NGZ4 309 aa12.88□□□□□ -0.35
CPSF7-202ENST00000394888 PRR7Q8TB68 274 aa12.88□□□□□ -0.35
CPSF7-202ENST00000394888 CACNG5Q9UF02 275 aa12.88□□□□□ -0.35
CPSF7-202ENST00000394888 FBXO7Q9Y3I1 522 aa12.88□□□□□ -0.35
CPSF7-202ENST00000394888 TMEM210A6NLX4 147 aa12.87□□□□□ -0.35
CPSF7-202ENST00000394888 PRAMEF6Q5VXH4 476 aa12.87□□□□□ -0.35
CPSF7-202ENST00000394888 C22orf34Q6ZV56 151 aa12.87□□□□□ -0.35
CPSF7-202ENST00000394888 RPRMLQ8N4K4 120 aa12.87□□□□□ -0.35
CPSF7-202ENST00000394888 Q8N7P7 452 aa12.87□□□□□ -0.35
CPSF7-202ENST00000394888 CACNA1HO95180 2353 aa12.87□□□□□ -0.35
CPSF7-202ENST00000394888 SRP19P09132 144 aaKnown RBP12.87□□□□□ -0.35
CPSF7-202ENST00000394888 EGR1P18146 543 aa12.87□□□□□ -0.35
CPSF7-202ENST00000394888 C1orf229Q6ZS94 237 aaPredicted RBP12.87□□□□□ -0.35
CPSF7-202ENST00000394888 CMTM1Q8IZ96 169 aa12.87□□□□□ -0.35
CPSF7-202ENST00000394888 C1orf162Q8NEQ5 155 aaPredicted RBP12.87□□□□□ -0.35
CPSF7-202ENST00000394888 CLDND2Q8NHS1 167 aa12.87□□□□□ -0.35
CPSF7-202ENST00000394888 SPIN2AQ99865 258 aa12.87□□□□□ -0.35
CPSF7-202ENST00000394888 SPIN2BQ9BPZ2 258 aa12.87□□□□□ -0.35
CPSF7-202ENST00000394888 WSB1Q9Y6I7 421 aa12.87□□□□□ -0.35
CPSF7-202ENST00000394888 PRR18Q8N4B5 295 aa12.87□□□□□ -0.35
CPSF7-202ENST00000394888 TUBA4BQ9H853 241 aa12.87□□□□□ -0.35
CPSF7-202ENST00000394888 FZR1Q9UM11 496 aa12.87□□□□□ -0.35
CPSF7-202ENST00000394888 GRPP07492 148 aa12.86□□□□□ -0.35
CPSF7-202ENST00000394888 AGAP20933 346 aa12.86□□□□□ -0.35
CPSF7-202ENST00000394888 MDKP21741 143 aaPredicted RBP12.86□□□□□ -0.35
CPSF7-202ENST00000394888 CEACAM6P40199 344 aa12.86□□□□□ -0.35
CPSF7-202ENST00000394888 ZNF266Q14584 549 aa12.86□□□□□ -0.35
CPSF7-202ENST00000394888 OR8G1Q15617 311 aa12.86□□□□□ -0.35
CPSF7-202ENST00000394888 MBNL2Q5VZF2 373 aaKnown RBP12.86□□□□□ -0.35
CPSF7-202ENST00000394888 OR52L2PQ8NGH6 319 aa12.86□□□□□ -0.35
CPSF7-202ENST00000394888 ISOC2Q96AB3 205 aa12.86□□□□□ -0.35
CPSF7-202ENST00000394888 IGHV2OR16-5A0A0B4J2B6 119 aa12.86□□□□□ -0.35
CPSF7-202ENST00000394888 A0A1B0GV50 99 aa12.86□□□□□ -0.35
CPSF7-202ENST00000394888 SULT1A1P50225 295 aa12.86□□□□□ -0.35
CPSF7-202ENST00000394888 TAS2R30P59541 319 aa12.86□□□□□ -0.35
CPSF7-202ENST00000394888 P4HA3Q7Z4N8 544 aa12.86□□□□□ -0.35
CPSF7-202ENST00000394888 FAM90A1Q86YD7 464 aa12.86□□□□□ -0.35
CPSF7-202ENST00000394888 SLC35B3Q9H1N7 401 aa12.86□□□□□ -0.35
CPSF7-202ENST00000394888 PRELID1Q9Y255 219 aa12.86□□□□□ -0.35
CPSF7-202ENST00000394888 POLDIP2Q9Y2S7 368 aa12.86□□□□□ -0.35
CPSF7-202ENST00000394888 TTC28Q96AY4 2481 aa12.86□□□□□ -0.35
CPSF7-202ENST00000394888 IGKV1D-33P01593 117 aa12.86□□□□□ -0.35
CPSF7-202ENST00000394888 IGKV1-33P01594 117 aa12.86□□□□□ -0.35
CPSF7-202ENST00000394888 AESQ08117 197 aa12.86□□□□□ -0.35
CPSF7-202ENST00000394888 C20orf24Q9BUV8 137 aa12.86□□□□□ -0.35
CPSF7-202ENST00000394888 OPN3Q9H1Y3 402 aaPredicted RBP12.86□□□□□ -0.35
CPSF7-202ENST00000394888 LINC00473A8K010 186 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 ZNF737O75373 536 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 SLC35E4Q6ICL7 350 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 LRP11Q86VZ4 500 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 C15orf54Q8N8G6 183 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 ZNF610Q8N9Z0 462 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 Q8TCH9 128 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 RSG1Q9BU20 258 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 KCNJ16Q9NPI9 418 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 CSMD1Q96PZ7 3565 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 CUL9Q8IWT3 2517 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 K7EM74 188 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 SWI5Q1ZZU3 235 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 ZNF645Q8N7E2 425 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 FAM215AQ9Y5M1 114 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 SLC25A15Q9Y619 301 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 ZZEF1O43149 2961 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 TRAV1-1A0A0B4J248 108 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 NXPH2O95156 264 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 RPS23P62266 143 aaKnown RBP12.85□□□□□ -0.35
CPSF7-202ENST00000394888 ZFP82Q8N141 532 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 OR13A1Q8NGR1 328 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 DCTN5Q9BTE1 182 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 SLC25A31Q9H0C2 315 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 OR14J1Q9UGF5 321 aa12.85□□□□□ -0.35
CPSF7-202ENST00000394888 RBFOX3A6NFN3 312 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 PRR33A8MZF0 331 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 SSTR5P35346 364 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 PEA15Q15121 130 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 ZNF506Q5JVG8 444 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 TMEM14EPQ6UXP3 125 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 FGFRL1Q8N441 504 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 C2CD4CQ8TF44 421 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 HEATR1Q9H583 2144 aaKnown RBP12.84□□□□□ -0.35
CPSF7-202ENST00000394888 MSL2Q9HCI7 577 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 TRAPPC2LQ9UL33 140 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 A0A1W2PPH5 198 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 UMAD1C9J7I0 102 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 WDR1O75083 606 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 HOXB1P14653 301 aaPredicted RBP12.84□□□□□ -0.35
CPSF7-202ENST00000394888 OR4C12Q96R67 309 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 KIAA1456Q9P272 454 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 HSPB7Q9UBY9 170 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 IGKV1D-17A0A075B6S4 117 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 C17orf98A8MV24 154 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 WRBO00258 174 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 SH2D1BO14796 132 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 SYNGR2O43760 224 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 HBZP02008 142 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 GLIPR1P48060 266 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 TPRX1Q8N7U7 411 aa12.84□□□□□ -0.35
CPSF7-202ENST00000394888 PARD6GQ9BYG4 376 aaPredicted RBP12.84□□□□□ -0.35
CPSF7-202ENST00000394888 SAV1Q9H4B6 383 aaPredicted RBP12.84□□□□□ -0.35
CPSF7-202ENST00000394888 CDH20Q9HBT6 801 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms