RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 RAB40CQ96S21 281 aa12.9□□□□□ -0.34
UBE2D3-207ENST00000394801 SMCO4Q9NRQ5 59 aa12.9□□□□□ -0.34
UBE2D3-207ENST00000394801 KCNIP1Q9NZI2 227 aa12.9□□□□□ -0.34
UBE2D3-207ENST00000394801 PPP1R3CQ9UQK1 317 aa12.9□□□□□ -0.34
UBE2D3-207ENST00000394801 IFNL4K9M1U5 179 aa12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 WNT9BO14905 357 aa12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 PRH1P02810 166 aa12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 OMGP23515 440 aa12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 CEBPDP49716 269 aaPredicted RBP12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 FABP6P51161 128 aa12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 DYNLT3P51808 116 aa12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 ZNF295-AS1Q8N0V1 137 aa12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 ZFP82Q8N141 532 aa12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 DRAM1Q8N682 238 aa12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 C15orf54Q8N8G6 183 aa12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 ZBTB34Q8NCN2 500 aa12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 RBM7Q9Y580 266 aaKnown RBP12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 SLC25A15Q9Y619 301 aa12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 PRR14LQ5THK1 2151 aa12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 C1QL1O75973 258 aa12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 CST7O76096 145 aa12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 CEACAM1P13688 526 aa12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 GCH1P30793 250 aa12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 TCF15Q12870 199 aa12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 HABP2Q14520 560 aaPredicted RBP12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 GUK1Q16774 197 aa12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 WSB1Q9Y6I7 421 aa12.89□□□□□ -0.35
UBE2D3-207ENST00000394801 A0A1B0GW64 132 aa12.88□□□□□ -0.35
UBE2D3-207ENST00000394801 OOEPA6NGQ2 149 aa12.88□□□□□ -0.35
UBE2D3-207ENST00000394801 C12orf77C9JDV5 145 aa12.88□□□□□ -0.35
UBE2D3-207ENST00000394801 TXNL1O43396 289 aa12.88□□□□□ -0.35
UBE2D3-207ENST00000394801 IGKV1-5P01602 117 aa12.88□□□□□ -0.35
UBE2D3-207ENST00000394801 GTF3C1Q12789 2109 aa12.88□□□□□ -0.35
UBE2D3-207ENST00000394801 TMEM182Q6ZP80 229 aaPredicted RBP12.88□□□□□ -0.35
UBE2D3-207ENST00000394801 Q6ZS92 163 aa12.88□□□□□ -0.35
UBE2D3-207ENST00000394801 OR2G3Q8NGZ4 309 aa12.88□□□□□ -0.35
UBE2D3-207ENST00000394801 UBALD1Q8TB05 177 aa12.88□□□□□ -0.35
UBE2D3-207ENST00000394801 GALMQ96C23 342 aa12.88□□□□□ -0.35
UBE2D3-207ENST00000394801 KPTNQ9Y664 436 aa12.88□□□□□ -0.35
UBE2D3-207ENST00000394801 TM4SF5O14894 197 aa12.88□□□□□ -0.35
UBE2D3-207ENST00000394801 PTAFRP25105 342 aa12.88□□□□□ -0.35
UBE2D3-207ENST00000394801 PAX5Q02548 391 aa12.88□□□□□ -0.35
UBE2D3-207ENST00000394801 PRAMEF6Q5VXH4 476 aa12.88□□□□□ -0.35
UBE2D3-207ENST00000394801 LFNGQ8NES3 379 aa12.88□□□□□ -0.35
UBE2D3-207ENST00000394801 SNIP1Q8TAD8 396 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-207ENST00000394801 GNPNAT1Q96EK6 184 aaPredicted RBP12.88□□□□□ -0.35
UBE2D3-207ENST00000394801 COQ2Q96H96 371 aa12.88□□□□□ -0.35
UBE2D3-207ENST00000394801 MSL2Q9HCI7 577 aa12.88□□□□□ -0.35
UBE2D3-207ENST00000394801 A6NLC8 198 aa12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 RNF212BA8MTL3 300 aa12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 S100A9P06702 114 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 EPHA1P21709 976 aa12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 OR3A1P47881 315 aa12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 SNRPEP62304 92 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 RPL23AP62750 156 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 AESQ08117 197 aa12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 MSMO1Q15800 293 aa12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 RNF212Q495C1 297 aa12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 ZNF645Q8N7E2 425 aa12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 OR1L1Q8NH94 360 aa12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 ZNF251Q9BRH9 671 aa12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 HIPK2Q9H2X6 1198 aa12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 CACNG5Q9UF02 275 aa12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 KCNS2Q9ULS6 477 aa12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 FZR1Q9UM11 496 aa12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 C5orf52A6NGY3 159 aa12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 C1orf196B1AJZ1 125 aa12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 UBE2CO00762 179 aa12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 PTBP3O95758 552 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 SULT1A1P50225 295 aa12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 MZT1Q08AG7 82 aa12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 EIF4EBP1Q13541 118 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 KIAA2026Q5HYC2 2103 aa12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 SP5Q6BEB4 398 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 MUC6Q6W4X9 2439 aa12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 ATP5SQ99766 215 aa12.87□□□□□ -0.35
UBE2D3-207ENST00000394801 SYNGR2O43760 224 aa12.86□□□□□ -0.35
UBE2D3-207ENST00000394801 NXPH3O95157 252 aa12.86□□□□□ -0.35
UBE2D3-207ENST00000394801 IZUMO4Q1ZYL8 232 aa12.86□□□□□ -0.35
UBE2D3-207ENST00000394801 EIF2S3LQ2VIR3 472 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-207ENST00000394801 SMIM21Q3B7S5 101 aa12.86□□□□□ -0.35
UBE2D3-207ENST00000394801 STX12Q86Y82 276 aa12.86□□□□□ -0.35
UBE2D3-207ENST00000394801 TMEM217Q8N7C4 229 aa12.86□□□□□ -0.35
UBE2D3-207ENST00000394801 KDF1Q8NAX2 398 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-207ENST00000394801 RNASE11Q8TAA1 199 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-207ENST00000394801 NANPQ8TBE9 248 aa12.86□□□□□ -0.35
UBE2D3-207ENST00000394801 FAM213BQ8TBF2 198 aa12.86□□□□□ -0.35
UBE2D3-207ENST00000394801 LURAP1Q96LR2 239 aa12.86□□□□□ -0.35
UBE2D3-207ENST00000394801 SMDT1Q9H4I9 107 aa12.86□□□□□ -0.35
UBE2D3-207ENST00000394801 LINC00587B1AMM8 73 aa12.86□□□□□ -0.35
UBE2D3-207ENST00000394801 DFFBO76075 338 aa12.86□□□□□ -0.35
UBE2D3-207ENST00000394801 HBZP02008 142 aa12.86□□□□□ -0.35
UBE2D3-207ENST00000394801 FABP1P07148 127 aa12.86□□□□□ -0.35
UBE2D3-207ENST00000394801 IL2RGP31785 369 aa12.86□□□□□ -0.35
UBE2D3-207ENST00000394801 PBDC1Q9BVG4 233 aa12.86□□□□□ -0.35
UBE2D3-207ENST00000394801 UFSP2Q9NUQ7 469 aa12.86□□□□□ -0.35
UBE2D3-207ENST00000394801 RFNGQ9Y644 331 aa12.86□□□□□ -0.35
UBE2D3-207ENST00000394801 PPT1P50897 306 aa12.85□□□□□ -0.35
UBE2D3-207ENST00000394801 TAS2R30P59541 319 aa12.85□□□□□ -0.35
UBE2D3-207ENST00000394801 HOXA4Q00056 320 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms