RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 H1FOOQ8IZA3 346 aaPredicted RBP6.52□□□□□ -1.37
SYNE2-205ENST00000394768 WDR34Q96EX3 536 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 IGHV3-43A0A0B4J1X8 118 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 OR2W5A6NFC9 320 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 IGHV3-43DP0DP04 118 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 PRNTQ86SH4 94 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 JKAMPQ9P055 326 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 IGHV5-51A0A0C4DH38 117 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 MAGEA5P43359 124 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 RPS4XP62701 263 aaKnown RBP6.52□□□□□ -1.37
SYNE2-205ENST00000394768 FAM109BQ6ICB4 259 aaPredicted RBP6.52□□□□□ -1.37
SYNE2-205ENST00000394768 TMEM88Q6PEY1 159 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 OR10D4PQ8NGN7 298 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 G6PC2Q9NQR9 355 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 CCL27Q9Y4X3 112 aa6.52□□□□□ -1.37
SYNE2-205ENST00000394768 FBLL1A6NHQ2 334 aaKnown RBP6.51□□□□□ -1.37
SYNE2-205ENST00000394768 CDIPTO14735 213 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 MGST3O14880 152 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 SPINK4O60575 86 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 RPLP1P05386 114 aaKnown RBP6.51□□□□□ -1.37
SYNE2-205ENST00000394768 SLC25A35Q3KQZ1 300 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 PHLDA1Q8WV24 401 aaPredicted RBP6.51□□□□□ -1.37
SYNE2-205ENST00000394768 SERGEFQ9UGK8 458 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 KCNE3Q9Y6H6 103 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 R4GN57 208 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 CASP8AP2Q9UKL3 1982 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 A0A1W2PPC1 479 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 LIPT2A6NK58 231 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 ZFPL1O95159 310 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 MYOD1P15172 320 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 SUCLG1P53597 346 aaKnown RBP6.51□□□□□ -1.37
SYNE2-205ENST00000394768 DLK1P80370 383 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 DPH3P1Q9H4G8 78 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 TRBV9A0A0B4J1U6 114 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 C7orf66A4D0T2 115 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 DLL1O00548 723 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 TSPAN13O95857 204 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 TYMSP04818 313 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 TCF23Q7RTU1 214 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 DSPPQ9NZW4 1301 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 CDK2AP2O75956 126 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 HIST1H4GQ99525 98 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 FAM206AQ9NX38 181 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 YLPM1P49750 1951 aaKnown RBP6.51□□□□□ -1.37
SYNE2-205ENST00000394768 LNP1A1A4G5 178 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 GPX1P07203 203 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 SMIM6P0DI80 62 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 POLR2IP36954 125 aaKnown RBP6.51□□□□□ -1.37
SYNE2-205ENST00000394768 C1orf53Q5VUE5 145 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 OVCH2Q7RTZ1 564 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 OR4X2Q8NGF9 303 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 OR4C13Q8NGP0 309 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 VGLL1Q99990 258 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 NAA50Q9GZZ1 169 aaKnown RBP6.51□□□□□ -1.37
SYNE2-205ENST00000394768 FER1L5A0AVI2 2057 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 A0A1W2PR80 420 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 FAM90A10PA6NDY2 464 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 FAM90A18PA6NE21 464 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 FAM90A16PA6NEW6 464 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 FAM90A20PA6NIJ5 464 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 FAM90A8PA6NJQ4 464 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 FAM90A7PA6NKC0 464 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 FAM90A22PA8MWA6 464 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 FAM90A12PA8MX19 464 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 FAM90A5PA8MXJ8 464 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 FAM90A23PA8MXZ1 464 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 FFAR1O14842 300 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 FAM90A15PP0C7V4 464 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 FAM90A13PP0C7W8 464 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 FAM90A14PP0C7W9 464 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 FAM90A24PP0C7X0 464 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 C10orf126Q8N4M7 172 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 GPR82Q96P67 336 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 OR5AC2Q9NZP5 309 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 KCNK7Q9Y2U2 307 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 WNK2Q9Y3S1 2297 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 ZNF56Q15929 161 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 SP6Q3SY56 376 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 Q6ZNX1 250 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 CENPVQ7Z7K6 275 aaPredicted RBP6.51□□□□□ -1.37
SYNE2-205ENST00000394768 WFDC3Q8IUB2 231 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 SPNS2Q8IVW8 549 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 OR10AG1Q8NH19 301 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 CNTD2Q9H8S5 307 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 TMEM140Q9NV12 185 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 ACACAQ13085 2346 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 CADP27708 2225 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 A0A0U1RQV5 110 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 SEC11BP0C7V7 166 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 FAAP20Q6NZ36 180 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 CFAP161Q6P656 301 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 VN1R17PQ8TDU5 208 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 CNOT1A5YKK6 2376 aaKnown RBP6.51□□□□□ -1.37
SYNE2-205ENST00000394768 J3QW42 95 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 CRHP06850 196 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 LIFP15018 202 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 RPL29P47914 159 aaKnown RBP6.51□□□□□ -1.37
SYNE2-205ENST00000394768 UCP3P55916 312 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 PRSS12P56730 875 aa6.51□□□□□ -1.37
SYNE2-205ENST00000394768 AANATQ16613 207 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms