RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 RFESDQ8TAC1 157 aa18.47■□□□□ 0.55
HMGA2-203ENST00000393578 FAM122AQ96E09 287 aa18.47■□□□□ 0.55
HMGA2-203ENST00000393578 C14orf79Q96F83 325 aa18.47■□□□□ 0.55
HMGA2-203ENST00000393578 GAFA1Q96PS6 74 aa18.47■□□□□ 0.55
HMGA2-203ENST00000393578 DYNLRB1Q9NP97 96 aa18.47■□□□□ 0.55
HMGA2-203ENST00000393578 LIN7CQ9NUP9 197 aaKnown RBP18.47■□□□□ 0.55
HMGA2-203ENST00000393578 CLEC18AA5D8T8 446 aa18.46■□□□□ 0.55
HMGA2-203ENST00000393578 B9A039 149 aa18.46■□□□□ 0.55
HMGA2-203ENST00000393578 F5H0A9 414 aaPredicted RBP18.46■□□□□ 0.55
HMGA2-203ENST00000393578 K7EPK0 472 aa18.46■□□□□ 0.55
HMGA2-203ENST00000393578 NMSQ5H8A3 153 aa18.46■□□□□ 0.55
HMGA2-203ENST00000393578 C1orf87Q8N0U7 546 aa18.46■□□□□ 0.55
HMGA2-203ENST00000393578 FAM71E2Q8N5Q1 922 aa18.46■□□□□ 0.55
HMGA2-203ENST00000393578 CLEC18CQ8NCF0 446 aa18.46■□□□□ 0.55
HMGA2-203ENST00000393578 DCAF16Q9NXF7 216 aa18.46■□□□□ 0.55
HMGA2-203ENST00000393578 NBEAQ8NFP9 2946 aa18.46■□□□□ 0.55
HMGA2-203ENST00000393578 ROS1P08922 2347 aa18.46■□□□□ 0.55
HMGA2-203ENST00000393578 DSCAMO60469 2012 aa18.46■□□□□ 0.55
HMGA2-203ENST00000393578 LINC00862A6NCI5 91 aa18.46■□□□□ 0.55
HMGA2-203ENST00000393578 RNF212BA8MTL3 300 aa18.46■□□□□ 0.55
HMGA2-203ENST00000393578 MST1LQ2TV78 715 aa18.46■□□□□ 0.55
HMGA2-203ENST00000393578 OR2D2Q9H210 308 aa18.46■□□□□ 0.55
HMGA2-203ENST00000393578 PLEKHF2Q9H8W4 249 aa18.46■□□□□ 0.55
HMGA2-203ENST00000393578 E5RGE8 158 aa18.45■□□□□ 0.54
HMGA2-203ENST00000393578 ST8SIA3O43173 380 aa18.45■□□□□ 0.54
HMGA2-203ENST00000393578 GYPAP02724 150 aa18.45■□□□□ 0.54
HMGA2-203ENST00000393578 SELLP14151 372 aa18.45■□□□□ 0.54
HMGA2-203ENST00000393578 FAM53AQ6NSI3 398 aaPredicted RBP18.45■□□□□ 0.54
HMGA2-203ENST00000393578 CISD1Q9NZ45 108 aaKnown RBP18.45■□□□□ 0.54
HMGA2-203ENST00000393578 NSG2Q9Y328 171 aa18.45■□□□□ 0.54
HMGA2-203ENST00000393578 KALRNO60229 2985 aa18.45■□□□□ 0.54
HMGA2-203ENST00000393578 TRAV38-1A0A0B4J264 116 aa18.44■□□□□ 0.54
HMGA2-203ENST00000393578 MEX3AA1L020 520 aaKnown RBP18.44■□□□□ 0.54
HMGA2-203ENST00000393578 ADAM20O43506 726 aa18.44■□□□□ 0.54
HMGA2-203ENST00000393578 PLAUP00749 431 aa18.44■□□□□ 0.54
HMGA2-203ENST00000393578 HKR1P10072 659 aa18.44■□□□□ 0.54
HMGA2-203ENST00000393578 FAM216AQ8WUB2 273 aa18.44■□□□□ 0.54
HMGA2-203ENST00000393578 PHYHIPLQ96FC7 376 aa18.44■□□□□ 0.54
HMGA2-203ENST00000393578 CCL13Q99616 98 aa18.44■□□□□ 0.54
HMGA2-203ENST00000393578 PLEKHA2Q9HB19 425 aa18.44■□□□□ 0.54
HMGA2-203ENST00000393578 JPT1Q9UK76 154 aa18.44■□□□□ 0.54
HMGA2-203ENST00000393578 RNF150Q9ULK6 438 aa18.44■□□□□ 0.54
HMGA2-203ENST00000393578 ARID1AO14497 2285 aa18.44■□□□□ 0.54
HMGA2-203ENST00000393578 NBASA2RRP1 2371 aa18.44■□□□□ 0.54
HMGA2-203ENST00000393578 LGALS8O00214 317 aa18.44■□□□□ 0.54
HMGA2-203ENST00000393578 SIGLEC5O15389 551 aa18.44■□□□□ 0.54
HMGA2-203ENST00000393578 SIAH2O43255 324 aa18.44■□□□□ 0.54
HMGA2-203ENST00000393578 RAB9BQ9NP90 201 aa18.44■□□□□ 0.54
HMGA2-203ENST00000393578 POMT1Q9Y6A1 747 aa18.44■□□□□ 0.54
HMGA2-203ENST00000393578 IGHV3-43A0A0B4J1X8 118 aa18.43■□□□□ 0.54
HMGA2-203ENST00000393578 A0A1B0GW55 424 aa18.43■□□□□ 0.54
HMGA2-203ENST00000393578 TMEM178BH3BS89 294 aa18.43■□□□□ 0.54
HMGA2-203ENST00000393578 F2RL2O00254 374 aa18.43■□□□□ 0.54
HMGA2-203ENST00000393578 DUX4L2P0CJ85 424 aa18.43■□□□□ 0.54
HMGA2-203ENST00000393578 DUX4L3P0CJ86 424 aa18.43■□□□□ 0.54
HMGA2-203ENST00000393578 DUX4L4P0CJ87 422 aa18.43■□□□□ 0.54
HMGA2-203ENST00000393578 DUX4L5P0CJ88 424 aa18.43■□□□□ 0.54
HMGA2-203ENST00000393578 DUX4L6P0CJ89 424 aa18.43■□□□□ 0.54
HMGA2-203ENST00000393578 DUX4L7P0CJ90 424 aa18.43■□□□□ 0.54
HMGA2-203ENST00000393578 CGB3P0DN86 165 aa18.43■□□□□ 0.54
HMGA2-203ENST00000393578 CGB7P0DN87 165 aa18.43■□□□□ 0.54
HMGA2-203ENST00000393578 IGHV3-43DP0DP04 118 aa18.43■□□□□ 0.54
HMGA2-203ENST00000393578 RPL12P30050 165 aaKnown RBP18.43■□□□□ 0.54
HMGA2-203ENST00000393578 TFF3Q07654 80 aa18.43■□□□□ 0.54
HMGA2-203ENST00000393578 THOC7Q6I9Y2 204 aaKnown RBP18.43■□□□□ 0.54
HMGA2-203ENST00000393578 DUX4L9Q6RFH8 374 aaPredicted RBP18.43■□□□□ 0.54
HMGA2-203ENST00000393578 GALNT11Q8NCW6 608 aa18.43■□□□□ 0.54
HMGA2-203ENST00000393578 STOML3Q8TAV4 291 aa18.43■□□□□ 0.54
HMGA2-203ENST00000393578 EDARADDQ8WWZ3 215 aa18.43■□□□□ 0.54
HMGA2-203ENST00000393578 ABHD14BQ96IU4 210 aa18.43■□□□□ 0.54
HMGA2-203ENST00000393578 DUX4Q9UBX2 424 aa18.43■□□□□ 0.54
HMGA2-203ENST00000393578 EIF4EBP1Q13541 118 aaPredicted RBP18.42■□□□□ 0.54
HMGA2-203ENST00000393578 FAM216BQ8N7L0 139 aa18.42■□□□□ 0.54
HMGA2-203ENST00000393578 ANKHD1Q8IWZ3 2542 aaKnown RBP18.42■□□□□ 0.54
HMGA2-203ENST00000393578 PKD1L2Q7Z442 2459 aa18.42■□□□□ 0.54
HMGA2-203ENST00000393578 COL6A6A6NMZ7 2263 aa18.42■□□□□ 0.54
HMGA2-203ENST00000393578 RELNP78509 3460 aa18.42■□□□□ 0.54
HMGA2-203ENST00000393578 NKX6-3A6NJ46 265 aa18.42■□□□□ 0.54
HMGA2-203ENST00000393578 SLC25A6P12236 298 aa18.42■□□□□ 0.54
HMGA2-203ENST00000393578 ZNF16P17020 682 aaPredicted RBP18.42■□□□□ 0.54
HMGA2-203ENST00000393578 PLA2G5P39877 138 aa18.42■□□□□ 0.54
HMGA2-203ENST00000393578 NKX2-1P43699 371 aaPredicted RBP18.42■□□□□ 0.54
HMGA2-203ENST00000393578 PCNPQ8WW12 178 aaKnown RBP18.42■□□□□ 0.54
HMGA2-203ENST00000393578 CCL17Q92583 94 aa18.42■□□□□ 0.54
HMGA2-203ENST00000393578 AGMATQ9BSE5 352 aa18.42■□□□□ 0.54
HMGA2-203ENST00000393578 ZC4H2Q9NQZ6 224 aa18.42■□□□□ 0.54
HMGA2-203ENST00000393578 CYTL1Q9NRR1 136 aa18.42■□□□□ 0.54
HMGA2-203ENST00000393578 TMEM106BQ9NUM4 274 aa18.42■□□□□ 0.54
HMGA2-203ENST00000393578 CALYQ9NYX4 217 aa18.42■□□□□ 0.54
HMGA2-203ENST00000393578 GNG12Q9UBI6 72 aa18.42■□□□□ 0.54
HMGA2-203ENST00000393578 RAI1Q7Z5J4 1906 aaPredicted RBP18.41■□□□□ 0.54
HMGA2-203ENST00000393578 PPIAL4EA0A075B759 164 aa18.41■□□□□ 0.54
HMGA2-203ENST00000393578 PPIAL4DF5H284 164 aa18.41■□□□□ 0.54
HMGA2-203ENST00000393578 TAAR5O14804 337 aa18.41■□□□□ 0.54
HMGA2-203ENST00000393578 YPEL1O60688 119 aa18.41■□□□□ 0.54
HMGA2-203ENST00000393578 PPIAL4FP0DN26 164 aa18.41■□□□□ 0.54
HMGA2-203ENST00000393578 LOXL3P58215 753 aa18.41■□□□□ 0.54
HMGA2-203ENST00000393578 SWI5Q1ZZU3 235 aa18.41■□□□□ 0.54
HMGA2-203ENST00000393578 ZNF672Q499Z4 452 aaPredicted RBP18.41■□□□□ 0.54
HMGA2-203ENST00000393578 MORN2Q502X0 79 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms