RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 SMDT1Q9H4I9 107 aa13.97□□□□□ -0.17
PHTF1-205ENST00000393357 MMP17Q9ULZ9 603 aa13.97□□□□□ -0.17
PHTF1-205ENST00000393357 SELENOKQ9Y6D0 94 aa13.97□□□□□ -0.17
PHTF1-205ENST00000393357 B4DEV8 164 aa13.96□□□□□ -0.17
PHTF1-205ENST00000393357 MKRN2OSH3BPM6 223 aa13.96□□□□□ -0.17
PHTF1-205ENST00000393357 TFF1P04155 84 aa13.96□□□□□ -0.17
PHTF1-205ENST00000393357 FRMD6-AS1P0C7T7 363 aa13.96□□□□□ -0.17
PHTF1-205ENST00000393357 CDKN1AP38936 164 aa13.96□□□□□ -0.17
PHTF1-205ENST00000393357 RAB4BP61018 213 aa13.96□□□□□ -0.17
PHTF1-205ENST00000393357 SLC38A11Q08AI6 406 aa13.96□□□□□ -0.17
PHTF1-205ENST00000393357 ACSM6Q6P461 480 aa13.96□□□□□ -0.17
PHTF1-205ENST00000393357 HAPLN4Q86UW8 402 aa13.96□□□□□ -0.17
PHTF1-205ENST00000393357 NDUFB4O95168 129 aa13.96□□□□□ -0.17
PHTF1-205ENST00000393357 DRD1P21728 446 aa13.96□□□□□ -0.17
PHTF1-205ENST00000393357 F2RP25116 425 aa13.96□□□□□ -0.17
PHTF1-205ENST00000393357 TDGF1P3P51864 188 aa13.96□□□□□ -0.17
PHTF1-205ENST00000393357 EDDM3BP56851 147 aa13.96□□□□□ -0.17
PHTF1-205ENST00000393357 TFF3Q07654 80 aa13.96□□□□□ -0.17
PHTF1-205ENST00000393357 RNF151Q2KHN1 245 aa13.96□□□□□ -0.17
PHTF1-205ENST00000393357 FFAR4Q5NUL3 377 aa13.96□□□□□ -0.17
PHTF1-205ENST00000393357 LHFPL2Q6ZUX7 228 aa13.96□□□□□ -0.17
PHTF1-205ENST00000393357 ZNF709Q8N972 641 aa13.96□□□□□ -0.17
PHTF1-205ENST00000393357 OR5D13Q8NGL4 314 aa13.96□□□□□ -0.17
PHTF1-205ENST00000393357 PSMF1Q92530 271 aa13.96□□□□□ -0.17
PHTF1-205ENST00000393357 DECR2Q9NUI1 292 aa13.96□□□□□ -0.17
PHTF1-205ENST00000393357 A0A1B0GW64 132 aa13.96□□□□□ -0.18
PHTF1-205ENST00000393357 C5orf49A4QMS7 147 aa13.96□□□□□ -0.18
PHTF1-205ENST00000393357 F2Z2F3 143 aa13.96□□□□□ -0.18
PHTF1-205ENST00000393357 NAPSAO96009 420 aa13.96□□□□□ -0.18
PHTF1-205ENST00000393357 EN2P19622 333 aaPredicted RBP13.96□□□□□ -0.18
PHTF1-205ENST00000393357 PTGDSP41222 190 aa13.96□□□□□ -0.18
PHTF1-205ENST00000393357 ETFRF1Q6IPR1 90 aa13.96□□□□□ -0.18
PHTF1-205ENST00000393357 AAED1Q7RTV5 226 aa13.96□□□□□ -0.18
PHTF1-205ENST00000393357 MRGPRGQ86SM5 289 aa13.96□□□□□ -0.18
PHTF1-205ENST00000393357 ZNF784Q8NCA9 323 aaPredicted RBP13.96□□□□□ -0.18
PHTF1-205ENST00000393357 OR10G4Q8NGN3 311 aa13.96□□□□□ -0.18
PHTF1-205ENST00000393357 OR10G9Q8NGN4 311 aa13.96□□□□□ -0.18
PHTF1-205ENST00000393357 OR10G7Q8NGN6 311 aa13.96□□□□□ -0.18
PHTF1-205ENST00000393357 ZDHHC16Q969W1 377 aa13.96□□□□□ -0.18
PHTF1-205ENST00000393357 BTF3L4Q96K17 158 aa13.96□□□□□ -0.18
PHTF1-205ENST00000393357 HSPB9Q9BQS6 159 aa13.96□□□□□ -0.18
PHTF1-205ENST00000393357 LOC102724200A0A096LPH7 203 aaPredicted RBP13.95□□□□□ -0.18
PHTF1-205ENST00000393357 ST6GALNAC3Q8NDV1 305 aa13.95□□□□□ -0.18
PHTF1-205ENST00000393357 SGMS2Q8NHU3 365 aa13.95□□□□□ -0.18
PHTF1-205ENST00000393357 ABHD3Q8WU67 409 aa13.95□□□□□ -0.18
PHTF1-205ENST00000393357 ZNF501Q96CX3 271 aaPredicted RBP13.95□□□□□ -0.18
PHTF1-205ENST00000393357 SPACA9Q96E40 222 aaPredicted RBP13.95□□□□□ -0.18
PHTF1-205ENST00000393357 TWSG1Q9GZX9 223 aa13.95□□□□□ -0.18
PHTF1-205ENST00000393357 OPN3Q9H1Y3 402 aaPredicted RBP13.95□□□□□ -0.18
PHTF1-205ENST00000393357 ZDHHC11Q9H8X9 412 aa13.95□□□□□ -0.18
PHTF1-205ENST00000393357 MANBALQ9NQG1 85 aa13.95□□□□□ -0.18
PHTF1-205ENST00000393357 GVINP1Q7Z2Y8 2422 aa13.95□□□□□ -0.18
PHTF1-205ENST00000393357 IL3RAP26951 378 aa13.95□□□□□ -0.18
PHTF1-205ENST00000393357 ATP5G3P48201 142 aa13.95□□□□□ -0.18
PHTF1-205ENST00000393357 RND2P52198 227 aa13.95□□□□□ -0.18
PHTF1-205ENST00000393357 ERVFC1-1P60608 527 aa13.95□□□□□ -0.18
PHTF1-205ENST00000393357 SRPXP78539 464 aa13.95□□□□□ -0.18
PHTF1-205ENST00000393357 ZNF525Q8N782 197 aa13.95□□□□□ -0.18
PHTF1-205ENST00000393357 CRISPLD2Q9H0B8 497 aa13.95□□□□□ -0.18
PHTF1-205ENST00000393357 RNF115Q9Y4L5 304 aa13.95□□□□□ -0.18
PHTF1-205ENST00000393357 SLC17A3O00476 420 aa13.94□□□□□ -0.18
PHTF1-205ENST00000393357 G6PCP35575 357 aa13.94□□□□□ -0.18
PHTF1-205ENST00000393357 BAGE3Q86Y29 109 aa13.94□□□□□ -0.18
PHTF1-205ENST00000393357 BAGE2Q86Y30 109 aa13.94□□□□□ -0.18
PHTF1-205ENST00000393357 OR5L2Q8NGL0 311 aa13.94□□□□□ -0.18
PHTF1-205ENST00000393357 ARFGEF3Q5TH69 2177 aa13.94□□□□□ -0.18
PHTF1-205ENST00000393357 B4E171 279 aa13.94□□□□□ -0.18
PHTF1-205ENST00000393357 LILRA1O75019 489 aa13.94□□□□□ -0.18
PHTF1-205ENST00000393357 HRASP01112 189 aa13.94□□□□□ -0.18
PHTF1-205ENST00000393357 NGFP01138 241 aa13.94□□□□□ -0.18
PHTF1-205ENST00000393357 S100GP29377 79 aa13.94□□□□□ -0.18
PHTF1-205ENST00000393357 TSPAN7P41732 249 aa13.94□□□□□ -0.18
PHTF1-205ENST00000393357 GNG10P50151 68 aa13.94□□□□□ -0.18
PHTF1-205ENST00000393357 ZNF295-AS1Q8N0V1 137 aa13.94□□□□□ -0.18
PHTF1-205ENST00000393357 ZNF114Q8NC26 417 aa13.94□□□□□ -0.18
PHTF1-205ENST00000393357 ACTR3CQ9C0K3 210 aaPredicted RBP13.94□□□□□ -0.18
PHTF1-205ENST00000393357 PTRH2Q9Y3E5 179 aaKnown RBP13.94□□□□□ -0.18
PHTF1-205ENST00000393357 TRAPPC2LH3BP13 241 aa13.94□□□□□ -0.18
PHTF1-205ENST00000393357 GCGP01275 180 aa13.94□□□□□ -0.18
PHTF1-205ENST00000393357 RPLP1P05386 114 aaKnown RBP13.94□□□□□ -0.18
PHTF1-205ENST00000393357 S100A7P31151 101 aa13.94□□□□□ -0.18
PHTF1-205ENST00000393357 FOXG1P55316 489 aaPredicted RBP13.94□□□□□ -0.18
PHTF1-205ENST00000393357 SHHQ15465 462 aa13.94□□□□□ -0.18
PHTF1-205ENST00000393357 TMEM56Q96MV1 263 aa13.94□□□□□ -0.18
PHTF1-205ENST00000393357 ATP23Q9Y6H3 246 aa13.94□□□□□ -0.18
PHTF1-205ENST00000393357 TMEM56-RWDD3S4R434 201 aa13.94□□□□□ -0.18
PHTF1-205ENST00000393357 LILRA5A6NI73 299 aa13.93□□□□□ -0.18
PHTF1-205ENST00000393357 C11orf94C9JXX5 98 aa13.93□□□□□ -0.18
PHTF1-205ENST00000393357 FUT6P51993 359 aa13.93□□□□□ -0.18
PHTF1-205ENST00000393357 HNRNPKP61978 463 aaKnown RBP eCLIP13.93□□□□□ -0.18
PHTF1-205ENST00000393357 MRPS21P82921 87 aaKnown RBP13.93□□□□□ -0.18
PHTF1-205ENST00000393357 ALKBH2Q6NS38 261 aa13.93□□□□□ -0.18
PHTF1-205ENST00000393357 ZDBF2Q9HCK1 2354 aa13.93□□□□□ -0.18
PHTF1-205ENST00000393357 SIAH2O43255 324 aa13.93□□□□□ -0.18
PHTF1-205ENST00000393357 HBG1P69891 147 aa13.93□□□□□ -0.18
PHTF1-205ENST00000393357 HBG2P69892 147 aa13.93□□□□□ -0.18
PHTF1-205ENST00000393357 DBX2Q6ZNG2 339 aa13.93□□□□□ -0.18
PHTF1-205ENST00000393357 TAF15Q92804 592 aaKnown RBP eCLIP13.93□□□□□ -0.18
PHTF1-205ENST00000393357 C11orf1Q9H5F2 150 aa13.93□□□□□ -0.18
PHTF1-205ENST00000393357 MTCH1Q9NZJ7 389 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms