RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 PPP1CCP36873 323 aaKnown RBP16.23■□□□□ 0.19
CCDC50-202ENST00000392456 PSG4Q00888 419 aa16.23■□□□□ 0.19
CCDC50-202ENST00000392456 KRTCAP3Q53RY4 240 aa16.23■□□□□ 0.19
CCDC50-202ENST00000392456 C1orf122Q6ZSJ8 110 aa16.23■□□□□ 0.19
CCDC50-202ENST00000392456 FAM57BQ71RH2 274 aa16.23■□□□□ 0.19
CCDC50-202ENST00000392456 C9orf106Q8NAJ2 232 aa16.23■□□□□ 0.19
CCDC50-202ENST00000392456 ARHGAP21Q5T5U3 1957 aa16.23■□□□□ 0.19
CCDC50-202ENST00000392456 MMP23AO75900 390 aa16.23■□□□□ 0.19
CCDC50-202ENST00000392456 ISG15P05161 165 aa16.23■□□□□ 0.19
CCDC50-202ENST00000392456 SRP19P09132 144 aaKnown RBP16.23■□□□□ 0.19
CCDC50-202ENST00000392456 ARF6P62330 175 aa16.23■□□□□ 0.19
CCDC50-202ENST00000392456 MMDQ15546 238 aa16.23■□□□□ 0.19
CCDC50-202ENST00000392456 OR51D1Q8NGF3 324 aa16.23■□□□□ 0.19
CCDC50-202ENST00000392456 SARAFQ96BY9 339 aa16.23■□□□□ 0.19
CCDC50-202ENST00000392456 MAGT1Q9H0U3 335 aa16.23■□□□□ 0.19
CCDC50-202ENST00000392456 FBXL17Q9UF56 701 aa16.23■□□□□ 0.19
CCDC50-202ENST00000392456 SMG1Q96Q15 3661 aaKnown RBP16.23■□□□□ 0.19
CCDC50-202ENST00000392456 PRR14LQ5THK1 2151 aa16.23■□□□□ 0.19
CCDC50-202ENST00000392456 C1QTNF9BB2RNN3 333 aa16.22■□□□□ 0.19
CCDC50-202ENST00000392456 B4DEV8 164 aa16.22■□□□□ 0.19
CCDC50-202ENST00000392456 C1QTNF9P0C862 333 aa16.22■□□□□ 0.19
CCDC50-202ENST00000392456 Q8NA96 180 aa16.22■□□□□ 0.19
CCDC50-202ENST00000392456 ADAD2Q8NCV1 583 aaKnown RBP16.22■□□□□ 0.19
CCDC50-202ENST00000392456 ZNF738Q8NE65 137 aa16.22■□□□□ 0.19
CCDC50-202ENST00000392456 OR13C9Q8NGT0 318 aa16.22■□□□□ 0.19
CCDC50-202ENST00000392456 CIB3Q96Q77 187 aaPredicted RBP16.22■□□□□ 0.19
CCDC50-202ENST00000392456 TMEM242Q9NWH2 141 aa16.22■□□□□ 0.19
CCDC50-202ENST00000392456 HHLA2Q9UM44 414 aa16.22■□□□□ 0.19
CCDC50-202ENST00000392456 DHDHQ9UQ10 334 aa16.22■□□□□ 0.19
CCDC50-202ENST00000392456 INTS1Q8N201 2190 aaKnown RBP16.22■□□□□ 0.19
CCDC50-202ENST00000392456 ZNF736B4DX44 427 aaPredicted RBP16.22■□□□□ 0.19
CCDC50-202ENST00000392456 SYNGR3O43761 229 aa16.22■□□□□ 0.19
CCDC50-202ENST00000392456 SEC11BP0C7V7 166 aa16.22■□□□□ 0.19
CCDC50-202ENST00000392456 TMEM225BP0DP42 221 aa16.22■□□□□ 0.19
CCDC50-202ENST00000392456 RAB32Q13637 225 aa16.22■□□□□ 0.19
CCDC50-202ENST00000392456 RAB11BQ15907 218 aa16.22■□□□□ 0.19
CCDC50-202ENST00000392456 TEX43Q6ZNM6 134 aa16.22■□□□□ 0.19
CCDC50-202ENST00000392456 MOB3AQ96BX8 217 aa16.22■□□□□ 0.19
CCDC50-202ENST00000392456 ABHD14AQ9BUJ0 271 aa16.22■□□□□ 0.19
CCDC50-202ENST00000392456 HSF4Q9ULV5 492 aa16.22■□□□□ 0.19
CCDC50-202ENST00000392456 ZNF320A2RRD8 509 aa16.21■□□□□ 0.19
CCDC50-202ENST00000392456 CLDN34H7C241 214 aa16.21■□□□□ 0.19
CCDC50-202ENST00000392456 HLA-HP01893 362 aa16.21■□□□□ 0.19
CCDC50-202ENST00000392456 CTSSP25774 331 aa16.21■□□□□ 0.19
CCDC50-202ENST00000392456 OTX1P32242 354 aaPredicted RBP16.21■□□□□ 0.19
CCDC50-202ENST00000392456 RPS20P60866 119 aaKnown RBP16.21■□□□□ 0.19
CCDC50-202ENST00000392456 FOXF2Q12947 444 aa16.21■□□□□ 0.19
CCDC50-202ENST00000392456 TDRG1Q3Y452 100 aa16.21■□□□□ 0.19
CCDC50-202ENST00000392456 RPRMLQ8N4K4 120 aa16.21■□□□□ 0.19
CCDC50-202ENST00000392456 TAS2R4Q9NYW5 299 aa16.21■□□□□ 0.19
CCDC50-202ENST00000392456 ST3GAL6Q9Y274 331 aa16.21■□□□□ 0.19
CCDC50-202ENST00000392456 STRAPQ9Y3F4 350 aaKnown RBP16.21■□□□□ 0.19
CCDC50-202ENST00000392456 GRB2P62993 217 aaKnown RBP16.21■□□□□ 0.18
CCDC50-202ENST00000392456 ARL6IP1Q15041 203 aa16.21■□□□□ 0.18
CCDC50-202ENST00000392456 ACSF3Q4G176 576 aaPredicted RBP16.21■□□□□ 0.18
CCDC50-202ENST00000392456 FAM219AQ8IW50 185 aa16.21■□□□□ 0.18
CCDC50-202ENST00000392456 GMPPAQ96IJ6 420 aaPredicted RBP16.21■□□□□ 0.18
CCDC50-202ENST00000392456 NIPSNAP3BQ9BS92 247 aa16.21■□□□□ 0.18
CCDC50-202ENST00000392456 OR2H1Q9GZK4 316 aa16.21■□□□□ 0.18
CCDC50-202ENST00000392456 ZNF701Q9NV72 531 aaPredicted RBP16.21■□□□□ 0.18
CCDC50-202ENST00000392456 ITPR1Q14643 2758 aa16.21■□□□□ 0.18
CCDC50-202ENST00000392456 ZGRF1Q86YA3 2104 aa16.2■□□□□ 0.18
CCDC50-202ENST00000392456 SERTM2A0A1B0GWG4 89 aa16.2■□□□□ 0.18
CCDC50-202ENST00000392456 CRYGSP22914 178 aa16.2■□□□□ 0.18
CCDC50-202ENST00000392456 SEM1Q6ZVN7 128 aa16.2■□□□□ 0.18
CCDC50-202ENST00000392456 OR4D5Q8NGN0 318 aa16.2■□□□□ 0.18
CCDC50-202ENST00000392456 FGGYQ96C11 551 aa16.2■□□□□ 0.18
CCDC50-202ENST00000392456 ADAT3Q96EY9 351 aaPredicted RBP16.2■□□□□ 0.18
CCDC50-202ENST00000392456 SDSLQ96GA7 329 aa16.2■□□□□ 0.18
CCDC50-202ENST00000392456 GPR84Q9NQS5 396 aa16.2■□□□□ 0.18
CCDC50-202ENST00000392456 TRAV30A0A087WSZ9 112 aa16.2■□□□□ 0.18
CCDC50-202ENST00000392456 CLEC18AA5D8T8 446 aa16.2■□□□□ 0.18
CCDC50-202ENST00000392456 RBFOX3A6NFN3 312 aa16.2■□□□□ 0.18
CCDC50-202ENST00000392456 SS18L1O75177 396 aaPredicted RBP16.2■□□□□ 0.18
CCDC50-202ENST00000392456 CYB5AP00167 134 aa16.2■□□□□ 0.18
CCDC50-202ENST00000392456 CSN2P05814 226 aa16.2■□□□□ 0.18
CCDC50-202ENST00000392456 PET100P0DJ07 73 aa16.2■□□□□ 0.18
CCDC50-202ENST00000392456 CFPP27918 469 aa16.2■□□□□ 0.18
CCDC50-202ENST00000392456 PRSS12P56730 875 aa16.2■□□□□ 0.18
CCDC50-202ENST00000392456 TMPRSS3P57727 454 aa16.2■□□□□ 0.18
CCDC50-202ENST00000392456 SNAI3Q3KNW1 292 aa16.2■□□□□ 0.18
CCDC50-202ENST00000392456 MORN2Q502X0 79 aa16.2■□□□□ 0.18
CCDC50-202ENST00000392456 DMRTC1Q5HYR2 192 aa16.2■□□□□ 0.18
CCDC50-202ENST00000392456 ABHD12BQ7Z5M8 362 aaPredicted RBP16.2■□□□□ 0.18
CCDC50-202ENST00000392456 CISD2Q8N5K1 135 aaKnown RBP16.2■□□□□ 0.18
CCDC50-202ENST00000392456 CLEC18CQ8NCF0 446 aa16.2■□□□□ 0.18
CCDC50-202ENST00000392456 LYZL4Q96KX0 146 aa16.2■□□□□ 0.18
CCDC50-202ENST00000392456 ZNF107Q9UII5 783 aaPredicted RBP16.2■□□□□ 0.18
CCDC50-202ENST00000392456 IGHV2OR16-5A0A0B4J2B6 119 aa16.19■□□□□ 0.18
CCDC50-202ENST00000392456 M0R135 149 aa16.19■□□□□ 0.18
CCDC50-202ENST00000392456 C1QL1O75973 258 aa16.19■□□□□ 0.18
CCDC50-202ENST00000392456 CHRM2P08172 466 aa16.19■□□□□ 0.18
CCDC50-202ENST00000392456 FCGR2AP12318 317 aa16.19■□□□□ 0.18
CCDC50-202ENST00000392456 AKR1C4P17516 323 aa16.19■□□□□ 0.18
CCDC50-202ENST00000392456 GUSBP1Q15486 140 aa16.19■□□□□ 0.18
CCDC50-202ENST00000392456 PRSS8Q16651 343 aa16.19■□□□□ 0.18
CCDC50-202ENST00000392456 PLPP7Q8NBV4 271 aa16.19■□□□□ 0.18
CCDC50-202ENST00000392456 OR5L1Q8NGL2 311 aa16.19■□□□□ 0.18
CCDC50-202ENST00000392456 OR1F12Q8NHA8 337 aa16.19■□□□□ 0.18
CCDC50-202ENST00000392456 ZCCHC14Q8WYQ9 949 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms