RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 CLDN14O95500 239 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 GYPAP02724 150 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 OR8U9P0C7N5 309 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 GNLYP22749 145 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 UQCRFS1P47985 274 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 TAGLNQ01995 201 aaKnown RBP9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 MSMO1Q15800 293 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 TMEM268Q5VZI3 342 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 MEX3BQ6ZN04 569 aaKnown RBP9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 ACOT7LQ6ZUV0 252 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 MUC15Q8N387 334 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 KCNRGQ8N5I3 272 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 SLC35G3Q8N808 338 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 ZBTB34Q8NCN2 500 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 DEFB108BQ8NET1 73 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 OR8U1Q8NH10 309 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 DCTN5Q9BTE1 182 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 GSKIPQ9P0R6 139 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 RNF222A6NCQ9 220 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 NKX6-3A6NJ46 265 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 H0YIZ8 118 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 SELLP14151 372 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 EDDM3BP56851 147 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 RAB32Q13637 225 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 GNMTQ14749 295 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 ESCO2Q56NI9 601 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 ZNF695Q8IW36 515 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 SELENOHQ8IZQ5 122 aaKnown RBP9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 ZNF645Q8N7E2 425 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 ZNF680Q8NEM1 530 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 FAM216AQ8WUB2 273 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 GPHA2Q96T91 129 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 CCL13Q99616 98 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 OR2S2Q9NQN1 319 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 KCNS2Q9ULS6 477 aa9.52□□□□□ -0.89
SMARCAL1-203ENST00000392128 PPIAL4EA0A075B759 164 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 A0A1B0GW55 424 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 PPIAL4DF5H284 164 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 F2RL2O00254 374 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 RP2O75695 350 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 DUX4L2P0CJ85 424 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 DUX4L3P0CJ86 424 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 DUX4L4P0CJ87 422 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 DUX4L5P0CJ88 424 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 DUX4L6P0CJ89 424 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 DUX4L7P0CJ90 424 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 PPIAL4FP0DN26 164 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 CGB3P0DN86 165 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 CGB7P0DN87 165 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 DUX4L9Q6RFH8 374 aaPredicted RBP9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 DRAM1Q8N682 238 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 INO80EQ8NBZ0 244 aaPredicted RBP9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 ITLN2Q8WWU7 325 aaPredicted RBP9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 DCUN1D4Q92564 292 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 RBPMSQ93062 196 aaKnown RBP9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 CNTNAP3BQ96NU0 1288 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 CNTNAP3Q9BZ76 1288 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 RAB9BQ9NP90 201 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 DUX4Q9UBX2 424 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 JPT1Q9UK76 154 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 PPIAL4AQ9Y536 164 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 PKDREJQ9NTG1 2253 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 KALRNO60229 2985 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 IFNA7P01567 189 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 PPP1CCP36873 323 aaKnown RBP9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 AP2S1P53680 142 aaPredicted RBP9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 POLR2GP62487 172 aaKnown RBP eCLIP9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 FAM216BQ8N7L0 139 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 RFESDQ8TAC1 157 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 CCL17Q92583 94 aa9.51□□□□□ -0.89
SMARCAL1-203ENST00000392128 RNF212BA8MTL3 300 aa9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 ZG16O60844 167 aa9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 PPOXP50336 477 aa9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 OR51H1Q8NH63 302 aa9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 OR2D2Q9H210 308 aa9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 ZFP57Q9NU63 452 aa9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 LIN7CQ9NUP9 197 aaKnown RBP9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 CALYQ9NYX4 217 aa9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 OR5AC2Q9NZP5 309 aa9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 TRGV10A0A0A0MS01 117 aa9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 IGHV1-69-2A0A0G2JMI3 117 aa9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 TNFRSF13BO14836 293 aaPredicted RBP9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 YPEL1O60688 119 aa9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 VDAC1P21796 283 aa9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 S100A10P60903 97 aa9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 EIF4EBP1Q13541 118 aaPredicted RBP9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 EXOSC2Q13868 293 aaKnown RBP9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 C17orf58Q2M2W7 97 aa9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 FAM53AQ6NSI3 398 aaPredicted RBP9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 EDARADDQ8WWZ3 215 aa9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 CORO2AQ92828 525 aa9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 YPEL2Q96QA6 119 aa9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 SPIN2AQ99865 258 aa9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 SPIN2BQ9BPZ2 258 aa9.5□□□□□ -0.89
SMARCAL1-203ENST00000392128 ACACBO00763 2458 aa9.49□□□□□ -0.89
SMARCAL1-203ENST00000392128 IGHV3-43A0A0B4J1X8 118 aa9.49□□□□□ -0.89
SMARCAL1-203ENST00000392128 MEX3AA1L020 520 aaKnown RBP9.49□□□□□ -0.89
SMARCAL1-203ENST00000392128 CLEC18AA5D8T8 446 aa9.49□□□□□ -0.89
SMARCAL1-203ENST00000392128 TMPRSS2O15393 492 aa9.49□□□□□ -0.89
SMARCAL1-203ENST00000392128 BCL2L11O43521 198 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms