RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 HIST1H1TP22492 207 aaPredicted RBP1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 OR10J1P30954 320 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 MAP2K4P45985 399 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 CMC4P56277 68 aaPredicted RBP1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 CTBP2P56545 445 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 TMEM33P57088 247 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 KRTAP10-11P60412 298 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 GABARAPL2P60520 117 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 HERVK_113P63121 156 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 ELF3P78545 371 aaPredicted RBP1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 TFAMQ00059 246 aaKnown RBP1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 PSG4Q00888 419 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 PRDX4Q13162 271 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 JOSD1Q15040 202 aaPredicted RBP1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 CDK10Q15131 360 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 TMEM241Q24JQ0 296 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 IAH1Q2TAA2 248 aaPredicted RBP1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 DEFB116Q30KQ4 102 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 RNF212Q495C1 297 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 ZCWPW2Q504Y3 356 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 ZNF678Q5SXM1 525 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 C1orf194Q5T5A4 169 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 LCE1AQ5T7P2 110 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 TEX36Q5VZQ5 186 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 ZFP1Q6P2D0 407 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 SMARCD3Q6STE5 483 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 SBSNQ6UWP8 590 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 C5orf46Q6UWT4 87 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 TCF23Q7RTU1 214 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 ATP5L2Q7Z4Y8 100 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 LINC01551Q86U37 167 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 C20orf196Q8IYI0 205 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 ZNF567Q8N184 647 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 RNF175Q8N4F7 328 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 KRTCAP2Q8N6L1 136 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 Q8N7P7 452 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 YIPF7Q8N8F6 280 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 LY6G5BQ8NDX9 201 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 OR9A2Q8NGT5 310 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 OR8S1Q8NH09 359 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 MCFD2Q8NI22 146 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 CIRBP-AS1Q8TBR5 109 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 C2orf15Q8WU43 125 aaKnown RBP1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 PYDC1Q8WXC3 89 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 CMBLQ96DG6 245 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 MS4A6EQ96DS6 147 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 ZNF799Q96GE5 643 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 SFRP2Q96HF1 295 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 REEP6Q96HR9 211 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 ABHD14BQ96IU4 210 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 GPR82Q96P67 336 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 OR2V2Q96R30 315 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 OR52B2Q96RD2 323 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 TRIB3Q96RU7 358 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 PEBP4Q96S96 227 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 HOPXQ9BPY8 73 aaPredicted RBP1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 NDFIP1Q9BT67 221 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 MED18Q9BUE0 208 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 DDA1Q9BW61 102 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 PCBD2Q9H0N5 130 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 MED28Q9H204 178 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 C11orf49Q9H6J7 331 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 C19orf12Q9NSK7 152 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 TMEM38BQ9NVV0 291 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 IDI2-AS1Q9NZ38 188 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 MRPL27Q9P0M9 148 aaKnown RBP1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 ZNF492Q9P255 531 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 ZNF222Q9UK12 451 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 ANGPT4Q9Y264 503 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 FAM32AQ9Y421 112 aaKnown RBP1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 KIF25-AS1Q9Y6Z4 181 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 FHAD1B1AJZ9 1412 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 PLCH2O75038 1416 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 DCCP43146 1447 aa1.11□□□□□ -2.23
TRAJ39-201ENST00000390498 MEGF6O75095 1541 aa1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 TET2Q6N021 2002 aaPredicted RBP1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 SYNMO15061 1565 aa1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 CEP170Q5SW79 1584 aa1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 WRNQ14191 1432 aaPredicted RBP eCLIP1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 TNS2Q63HR2 1409 aa1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 IGHV3OR15-7A0A075B7D8 119 aa1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 IGHV3-43A0A0B4J1X8 118 aa1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 PINLYPA6NC86 204 aa1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 OR4C46A6NHA9 309 aa1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 OR4C45A6NMZ5 311 aa1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 M0R381 172 aa1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 FAAHO00519 579 aa1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 MRASO14807 208 aa1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 RBFOX2O43251 390 aaKnown RBP eCLIP1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 PDE6DO43924 150 aa1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 ZNF861PO60384 105 aa1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 ATG12O94817 140 aa1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 APOMO95445 188 aa1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 FSTL3O95633 263 aa1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 CCNE2O96020 404 aa1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 IFNA1P01562 189 aa1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 IGLV3-27P01718 113 aa1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 IGHV1-46P01743 117 aa1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 IGHMP01871 453 aa1.1□□□□□ -2.23
TRAJ39-201ENST00000390498 HLA-DQB1P01920 261 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms