RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 A0A0G2JRQ6 117 aa15.2■□□□□ 0.02
ACTN4-202ENST00000390009 BSPH1Q075Z2 132 aa15.2■□□□□ 0.02
ACTN4-202ENST00000390009 ARL11Q969Q4 196 aa15.2■□□□□ 0.02
ACTN4-202ENST00000390009 SNX22Q96L94 193 aa15.2■□□□□ 0.02
ACTN4-202ENST00000390009 OR2D2Q9H210 308 aa15.2■□□□□ 0.02
ACTN4-202ENST00000390009 PLEKHF2Q9H8W4 249 aa15.2■□□□□ 0.02
ACTN4-202ENST00000390009 GCM1Q9NP62 436 aa15.2■□□□□ 0.02
ACTN4-202ENST00000390009 SPTBN4Q9H254 2564 aa15.19■□□□□ 0.02
ACTN4-202ENST00000390009 MEX3AA1L020 520 aaKnown RBP15.19■□□□□ 0.02
ACTN4-202ENST00000390009 FAM157CP0CG43 387 aa15.19■□□□□ 0.02
ACTN4-202ENST00000390009 ZNF16P17020 682 aaPredicted RBP15.19■□□□□ 0.02
ACTN4-202ENST00000390009 ID3Q02535 119 aa15.19■□□□□ 0.02
ACTN4-202ENST00000390009 TRAT1Q6PIZ9 186 aa15.19■□□□□ 0.02
ACTN4-202ENST00000390009 SSX8Q7RTT4 187 aa15.19■□□□□ 0.02
ACTN4-202ENST00000390009 PPP1R35Q8TAP8 253 aa15.19■□□□□ 0.02
ACTN4-202ENST00000390009 VKORC1Q9BQB6 163 aa15.19■□□□□ 0.02
ACTN4-202ENST00000390009 DCTN5Q9BTE1 182 aa15.19■□□□□ 0.02
ACTN4-202ENST00000390009 MAGT1Q9H0U3 335 aa15.19■□□□□ 0.02
ACTN4-202ENST00000390009 RNF150Q9ULK6 438 aa15.19■□□□□ 0.02
ACTN4-202ENST00000390009 DYSFO75923 2080 aa15.19■□□□□ 0.02
ACTN4-202ENST00000390009 LGALS8O00214 317 aa15.19■□□□□ 0.02
ACTN4-202ENST00000390009 MGST3O14880 152 aa15.19■□□□□ 0.02
ACTN4-202ENST00000390009 SSSCA1O60232 199 aa15.19■□□□□ 0.02
ACTN4-202ENST00000390009 IGKV1-39P01597 117 aa15.19■□□□□ 0.02
ACTN4-202ENST00000390009 IGKV1D-39P04432 117 aa15.19■□□□□ 0.02
ACTN4-202ENST00000390009 PVALBP20472 110 aaPredicted RBP15.19■□□□□ 0.02
ACTN4-202ENST00000390009 TNFSF4P23510 183 aa15.19■□□□□ 0.02
ACTN4-202ENST00000390009 PPP1CCP36873 323 aaKnown RBP15.19■□□□□ 0.02
ACTN4-202ENST00000390009 FAM201AQ5SY85 155 aa15.19■□□□□ 0.02
ACTN4-202ENST00000390009 EIF5AL1Q6IS14 154 aaKnown RBP15.19■□□□□ 0.02
ACTN4-202ENST00000390009 ZNRF1Q8ND25 227 aa15.19■□□□□ 0.02
ACTN4-202ENST00000390009 OR1S2Q8NGQ3 325 aa15.19■□□□□ 0.02
ACTN4-202ENST00000390009 GPR146Q96CH1 333 aa15.19■□□□□ 0.02
ACTN4-202ENST00000390009 ESRP2Q9H6T0 727 aaKnown RBP15.19■□□□□ 0.02
ACTN4-202ENST00000390009 TAS2R3Q9NYW6 316 aa15.19■□□□□ 0.02
ACTN4-202ENST00000390009 DIDO1Q9BTC0 2240 aaKnown RBP15.18■□□□□ 0.02
ACTN4-202ENST00000390009 RAI1Q7Z5J4 1906 aaPredicted RBP15.18■□□□□ 0.02
ACTN4-202ENST00000390009 C15orf65H3BRN8 121 aa15.18■□□□□ 0.02
ACTN4-202ENST00000390009 EPHA1P21709 976 aa15.18■□□□□ 0.02
ACTN4-202ENST00000390009 NHLH2Q02577 135 aa15.18■□□□□ 0.02
ACTN4-202ENST00000390009 ZNF585BQ52M93 769 aa15.18■□□□□ 0.02
ACTN4-202ENST00000390009 OR2C3Q8N628 320 aa15.18■□□□□ 0.02
ACTN4-202ENST00000390009 UBAC2Q8NBM4 344 aa15.18■□□□□ 0.02
ACTN4-202ENST00000390009 ZBTB34Q8NCN2 500 aa15.18■□□□□ 0.02
ACTN4-202ENST00000390009 RNASE11Q8TAA1 199 aaKnown RBP15.18■□□□□ 0.02
ACTN4-202ENST00000390009 RFESDQ8TAC1 157 aa15.18■□□□□ 0.02
ACTN4-202ENST00000390009 RNF7Q9UBF6 113 aa15.18■□□□□ 0.02
ACTN4-202ENST00000390009 USF3Q68DE3 2245 aa15.18■□□□□ 0.02
ACTN4-202ENST00000390009 IGHV3-43A0A0B4J1X8 118 aa15.17■□□□□ 0.02
ACTN4-202ENST00000390009 A0A1B0GU03 582 aa15.17■□□□□ 0.02
ACTN4-202ENST00000390009 ODAMA1E959 279 aa15.17■□□□□ 0.02
ACTN4-202ENST00000390009 RNF212BA8MTL3 300 aa15.17■□□□□ 0.02
ACTN4-202ENST00000390009 SPINT2O43291 252 aa15.17■□□□□ 0.02
ACTN4-202ENST00000390009 IGHV3-43DP0DP04 118 aa15.17■□□□□ 0.02
ACTN4-202ENST00000390009 SLC25A6P12236 298 aa15.17■□□□□ 0.02
ACTN4-202ENST00000390009 CD80P33681 288 aa15.17■□□□□ 0.02
ACTN4-202ENST00000390009 DSCAML1Q8TD84 2053 aa15.17■□□□□ 0.02
ACTN4-202ENST00000390009 TRGV8A0A0C4DH27 118 aa15.17■□□□□ 0.02
ACTN4-202ENST00000390009 K7N7A8 449 aa15.17■□□□□ 0.02
ACTN4-202ENST00000390009 PITX3O75364 302 aa15.17■□□□□ 0.02
ACTN4-202ENST00000390009 NXPH3O95157 252 aa15.17■□□□□ 0.02
ACTN4-202ENST00000390009 CAV2P51636 162 aa15.17■□□□□ 0.02
ACTN4-202ENST00000390009 EWSR1Q01844 656 aaKnown RBP eCLIP15.17■□□□□ 0.022e-6■■■■□ 22.2
ACTN4-202ENST00000390009 BTN1A1Q13410 526 aa15.17■□□□□ 0.02
ACTN4-202ENST00000390009 ADIPOQQ15848 244 aa15.17■□□□□ 0.02
ACTN4-202ENST00000390009 FAM222BQ8WU58 562 aa15.17■□□□□ 0.02
ACTN4-202ENST00000390009 LSM10Q969L4 123 aaKnown RBP15.17■□□□□ 0.02
ACTN4-202ENST00000390009 C5orf30Q96GV9 206 aa15.17■□□□□ 0.02
ACTN4-202ENST00000390009 WFDC1Q9HC57 220 aa15.17■□□□□ 0.02
ACTN4-202ENST00000390009 FAM24AA6NFZ4 105 aa15.16■□□□□ 0.02
ACTN4-202ENST00000390009 KRBOX1C9JBD0 128 aa15.16■□□□□ 0.02
ACTN4-202ENST00000390009 FBXO24O75426 580 aa15.16■□□□□ 0.02
ACTN4-202ENST00000390009 OR4A8P0C604 315 aa15.16■□□□□ 0.02
ACTN4-202ENST00000390009 AKR1C2P52895 323 aa15.16■□□□□ 0.02
ACTN4-202ENST00000390009 HTD2P86397 168 aa15.16■□□□□ 0.02
ACTN4-202ENST00000390009 TUSC1Q2TAM9 212 aa15.16■□□□□ 0.02
ACTN4-202ENST00000390009 LYRM2Q9NU23 88 aaPredicted RBP15.16■□□□□ 0.02
ACTN4-202ENST00000390009 LPAR3Q9UBY5 353 aa15.16■□□□□ 0.02
ACTN4-202ENST00000390009 TANC2Q9HCD6 1990 aa15.16■□□□□ 0.02
ACTN4-202ENST00000390009 ZNF705EA8MWA4 302 aaPredicted RBP15.16■□□□□ 0.02
ACTN4-202ENST00000390009 ATXN7O15265 892 aaPredicted RBP15.16■□□□□ 0.02
ACTN4-202ENST00000390009 CYB5R3P00387 301 aaPredicted RBP15.16■□□□□ 0.02
ACTN4-202ENST00000390009 IGKV1-5P01602 117 aa15.16■□□□□ 0.02
ACTN4-202ENST00000390009 ADH4P08319 380 aa15.16■□□□□ 0.02
ACTN4-202ENST00000390009 GZMHP20718 246 aa15.16■□□□□ 0.02
ACTN4-202ENST00000390009 VAMP2P63027 116 aa15.16■□□□□ 0.02
ACTN4-202ENST00000390009 IZUMO4Q1ZYL8 232 aa15.16■□□□□ 0.02
ACTN4-202ENST00000390009 ZNF808Q8N4W9 903 aaPredicted RBP15.16■□□□□ 0.02
ACTN4-202ENST00000390009 WFIKKN1Q96NZ8 548 aa15.16■□□□□ 0.02
ACTN4-202ENST00000390009 BORCS7-ASMTA0A0B4J1R7 106 aa15.15■□□□□ 0.02
ACTN4-202ENST00000390009 IGSF23A1L1A6 192 aa15.15■□□□□ 0.02
ACTN4-202ENST00000390009 WRBO00258 174 aa15.15■□□□□ 0.02
ACTN4-202ENST00000390009 MMP9P14780 707 aa15.15■□□□□ 0.02
ACTN4-202ENST00000390009 EIF4EBP1Q13541 118 aaPredicted RBP15.15■□□□□ 0.02
ACTN4-202ENST00000390009 ADAM5Q6NVV9 412 aa15.15■□□□□ 0.02
ACTN4-202ENST00000390009 Q6ZRM9 215 aa15.15■□□□□ 0.02
ACTN4-202ENST00000390009 Q8TCH9 128 aa15.15■□□□□ 0.02
ACTN4-202ENST00000390009 ARV1Q9H2C2 271 aa15.15■□□□□ 0.02
ACTN4-202ENST00000390009 NBEAQ8NFP9 2946 aa15.15■□□□□ 0.02
ACTN4-202ENST00000390009 DEFB108AA8MXU0 73 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms