RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 VAMP2P63027 116 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 CSNK2BP67870 215 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 NDPQ00604 133 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 ZNF85Q03923 595 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 Q0VG73 95 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 FUT5Q11128 374 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 GUK1Q16774 197 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 TPD52L1Q16890 204 aaPredicted RBP0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 EXOC3L4Q17RC7 722 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 MS4A18Q3C1V0 323 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 KRTAP6-2Q3LI66 62 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 ZCWPW2Q504Y3 356 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 DCAF17Q5H9S7 520 aaPredicted RBP0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 DDX59Q5T1V6 619 aaKnown RBP eCLIP0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 CCDC183Q5T5S1 534 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 RSBN1Q5VWQ0 802 aaPredicted RBP0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 SLC48A1Q6P1K1 146 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 DCUN1D2Q6PH85 259 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 PLET1Q6UQ28 207 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 MBOAT1Q6ZNC8 495 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 PID1Q7Z2X4 250 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 FAM19A1Q7Z5A9 133 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 DAZ4Q86SG3 579 aaKnown RBP0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 ELMOD2Q8IZ81 293 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 FAM9BQ8IZU0 186 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 FBXL16Q8N461 479 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 FTMTQ8N4E7 242 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 C11orf65Q8NCR3 313 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 NPBQ8NG41 125 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 OR4L1Q8NH43 312 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 TSPEARQ8WU66 669 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 PLAC4Q8WY50 150 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 NPIPB3Q92617 1050 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 UBE2WQ96B02 151 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 CHMP6Q96FZ7 201 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 C7orf34Q96L11 122 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 LINC01587Q99440 93 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 TEAD3Q99594 435 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 COQ7Q99807 217 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 SNRNP25Q9BV90 132 aaKnown RBP0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 ALG8Q9BVK2 526 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 REEP4Q9H6H4 257 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 DAZ3Q9NR90 486 aaKnown RBP0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 DDX18Q9NVP1 670 aaKnown RBP0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 GIN1Q9NXP7 522 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 TAS2R3Q9NYW6 316 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 GHRLQ9UBU3 117 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 OR14J1Q9UGF5 321 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 ANGPTL3Q9Y5C1 460 aa0.3□□□□□ -2.36
RNU6-42P-201ENST00000384165 IGLV10-54A0A075B6I4 117 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 A0A087WV62 115 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 A0A087X0M5 115 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 SAA2-SAA4A0A096LPE2 208 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 IGHV3-49A0A0A0MS15 119 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 A0A0A6YYD5 115 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 A0A1B0GX30 115 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 TCRBV5S2A0A599 114 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 BICDL2A1A5D9 508 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 FUOMA2VDF0 154 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 CDHR4A6H8M9 788 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 PGPA6NDG6 321 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 NPIPB13A6NJU9 1138 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 C3orf70A6NLC5 250 aaPredicted RBP0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 SUPT3HB4E1H0 165 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 CHEK1O14757 476 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 AIM2O14862 343 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 SLC22A1O15245 554 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 SGCEO43556 437 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 OR2T1O43869 369 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 SLC16A7O60669 478 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 SEC22BO75396 215 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 SERPINI2O75830 405 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 ANXA9O76027 345 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 ATG12O94817 140 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 OR6A2O95222 327 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 AHSA1O95433 338 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 HLA-DQA1P01909 254 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 HBZP02008 142 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 ORM1P02763 201 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 HTR1AP08908 422 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 HTR2CP28335 458 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 SERPINB1P30740 379 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 RPS10P46783 165 aaKnown RBP0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 RFX2P48378 723 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 GNG10P50151 68 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 NDUFA8P51970 172 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 BLVRAP53004 296 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 ARFIP1P53367 373 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 UGT2B15P54855 530 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 GEMP55040 296 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 CDKN2DP55273 166 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 MRPS34P82930 218 aaKnown RBP0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 BNIP1Q12981 228 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 GK2Q14410 553 aaPredicted RBP0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 ELOBQ15370 118 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 SMIM21Q3B7S5 101 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 ZNF876PQ49A33 203 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 FAM229BQ4G0N7 80 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 BOLA3Q53S33 107 aa0.29□□□□□ -2.36
RNU6-42P-201ENST00000384165 PSMG4Q5JS54 123 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms