RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 LY6LH3BQJ8 138 aa12.54□□□□□ -0.4
PDGFB-202ENST00000381551 BUB1B-PAK6H3BSN5 160 aa12.54□□□□□ -0.4
PDGFB-202ENST00000381551 BET1O15155 118 aa12.54□□□□□ -0.4
PDGFB-202ENST00000381551 SLC31A2O15432 143 aa12.54□□□□□ -0.4
PDGFB-202ENST00000381551 HSPA12AO43301 675 aa12.54□□□□□ -0.4
PDGFB-202ENST00000381551 RBBP9O75884 186 aa12.54□□□□□ -0.4
PDGFB-202ENST00000381551 PTBP1P26599 531 aaKnown RBP eCLIP12.54□□□□□ -0.4
PDGFB-202ENST00000381551 HTR1DP28221 377 aa12.54□□□□□ -0.4
PDGFB-202ENST00000381551 MRPS10P82664 201 aaKnown RBP12.54□□□□□ -0.4
PDGFB-202ENST00000381551 DGCR2P98153 550 aa12.54□□□□□ -0.4
PDGFB-202ENST00000381551 SCGB2A2Q13296 93 aa12.54□□□□□ -0.4
PDGFB-202ENST00000381551 HLA-DRB5Q30154 266 aa12.54□□□□□ -0.4
PDGFB-202ENST00000381551 MINOS1Q5TGZ0 78 aa12.54□□□□□ -0.4
PDGFB-202ENST00000381551 LINC00299Q6ZSB3 139 aa12.54□□□□□ -0.4
PDGFB-202ENST00000381551 SLC25A48Q6ZT89 311 aaKnown RBP12.54□□□□□ -0.4
PDGFB-202ENST00000381551 OR10J5Q8NHC4 309 aa12.54□□□□□ -0.4
PDGFB-202ENST00000381551 MALSU1Q96EH3 234 aa12.54□□□□□ -0.4
PDGFB-202ENST00000381551 PRDM13Q9H4Q3 707 aa12.54□□□□□ -0.4
PDGFB-202ENST00000381551 PTTG2Q9NZH5 202 aa12.54□□□□□ -0.4
PDGFB-202ENST00000381551 MTFP1Q9UDX5 166 aa12.54□□□□□ -0.4
PDGFB-202ENST00000381551 MINOS1-NBL1R4GNA1 71 aa12.54□□□□□ -0.4
PDGFB-202ENST00000381551 LEUTXA8MZ59 168 aa12.53□□□□□ -0.4
PDGFB-202ENST00000381551 ITGB1BP1O14713 200 aa12.53□□□□□ -0.4
PDGFB-202ENST00000381551 DEFB112Q30KQ8 113 aa12.53□□□□□ -0.4
PDGFB-202ENST00000381551 RNASE12Q5GAN4 147 aaKnown RBP12.53□□□□□ -0.4
PDGFB-202ENST00000381551 SPANXN2Q5MJ10 180 aa12.53□□□□□ -0.4
PDGFB-202ENST00000381551 OR5AP2Q8NGF4 316 aa12.53□□□□□ -0.4
PDGFB-202ENST00000381551 SMIM4Q8WVI0 70 aa12.53□□□□□ -0.4
PDGFB-202ENST00000381551 CREB3L1Q96BA8 519 aa12.53□□□□□ -0.4
PDGFB-202ENST00000381551 ZNF48Q96MX3 618 aaPredicted RBP12.53□□□□□ -0.4
PDGFB-202ENST00000381551 SLC6A7Q99884 636 aa12.53□□□□□ -0.4
PDGFB-202ENST00000381551 PARP12Q9H0J9 701 aaKnown RBP12.53□□□□□ -0.4
PDGFB-202ENST00000381551 C11orf54Q9H0W9 315 aaPredicted RBP12.53□□□□□ -0.4
PDGFB-202ENST00000381551 RDH8Q9NYR8 311 aa12.53□□□□□ -0.4
PDGFB-202ENST00000381551 DPM3Q9P2X0 92 aa12.53□□□□□ -0.4
PDGFB-202ENST00000381551 FAM96BQ9Y3D0 163 aa12.53□□□□□ -0.4
PDGFB-202ENST00000381551 GSTZ1O43708 216 aaPredicted RBP12.52□□□□□ -0.41
PDGFB-202ENST00000381551 RCVRNP35243 200 aa12.52□□□□□ -0.41
PDGFB-202ENST00000381551 ARPC4P59998 168 aa12.52□□□□□ -0.41
PDGFB-202ENST00000381551 ZNF79Q15937 498 aa12.52□□□□□ -0.41
PDGFB-202ENST00000381551 H1FOOQ8IZA3 346 aaPredicted RBP12.52□□□□□ -0.41
PDGFB-202ENST00000381551 DYNAPQ8N1N2 210 aa12.52□□□□□ -0.41
PDGFB-202ENST00000381551 OR2AK2Q8NG84 335 aa12.52□□□□□ -0.41
PDGFB-202ENST00000381551 OR10X1Q8NGY0 326 aa12.52□□□□□ -0.41
PDGFB-202ENST00000381551 AGMATQ9BSE5 352 aa12.52□□□□□ -0.41
PDGFB-202ENST00000381551 MEGF9Q9H1U4 602 aa12.52□□□□□ -0.41
PDGFB-202ENST00000381551 RBMX2Q9Y388 322 aaKnown RBP12.52□□□□□ -0.41
PDGFB-202ENST00000381551 MDFIC2A0A1B0GVS7 189 aa12.51□□□□□ -0.41
PDGFB-202ENST00000381551 FBP1P09467 338 aa12.51□□□□□ -0.41
PDGFB-202ENST00000381551 PAX6P26367 422 aa12.51□□□□□ -0.41
PDGFB-202ENST00000381551 HLA-DMAP28067 261 aa12.51□□□□□ -0.41
PDGFB-202ENST00000381551 SSBP1Q04837 148 aaKnown RBP12.51□□□□□ -0.41
PDGFB-202ENST00000381551 SSX2Q16385 188 aa12.51□□□□□ -0.41
PDGFB-202ENST00000381551 OVCH2Q7RTZ1 564 aa12.51□□□□□ -0.41
PDGFB-202ENST00000381551 SIGLECL1Q8N7X8 197 aa12.51□□□□□ -0.41
PDGFB-202ENST00000381551 EDARADDQ8WWZ3 215 aa12.51□□□□□ -0.41
PDGFB-202ENST00000381551 ST6GALNAC6Q969X2 333 aa12.51□□□□□ -0.41
PDGFB-202ENST00000381551 GINS4Q9BRT9 223 aa12.51□□□□□ -0.41
PDGFB-202ENST00000381551 ABHD14AQ9BUJ0 271 aa12.51□□□□□ -0.41
PDGFB-202ENST00000381551 OCEL1Q9H607 264 aa12.51□□□□□ -0.41
PDGFB-202ENST00000381551 NECAP2Q9NVZ3 263 aa12.51□□□□□ -0.41
PDGFB-202ENST00000381551 AMMECR1Q9Y4X0 333 aaPredicted RBP12.51□□□□□ -0.41
PDGFB-202ENST00000381551 HILPDAQ9Y5L2 63 aa12.51□□□□□ -0.41
PDGFB-202ENST00000381551 CUBNO60494 3623 aa12.5□□□□□ -0.41
PDGFB-202ENST00000381551 ST8SIA5O15466 376 aa12.5□□□□□ -0.41
PDGFB-202ENST00000381551 PMP2P02689 132 aa12.5□□□□□ -0.41
PDGFB-202ENST00000381551 OR5H8P0DN80 308 aa12.5□□□□□ -0.41
PDGFB-202ENST00000381551 NFYAP23511 347 aaPredicted RBP12.5□□□□□ -0.41
PDGFB-202ENST00000381551 CEACAM3P40198 252 aa12.5□□□□□ -0.41
PDGFB-202ENST00000381551 OR3A3P47888 321 aa12.5□□□□□ -0.41
PDGFB-202ENST00000381551 RFX2P48378 723 aa12.5□□□□□ -0.41
PDGFB-202ENST00000381551 TAS2R46P59540 309 aa12.5□□□□□ -0.41
PDGFB-202ENST00000381551 ACTBP60709 375 aa12.5□□□□□ -0.41
PDGFB-202ENST00000381551 ACTG1P63261 375 aa12.5□□□□□ -0.41
PDGFB-202ENST00000381551 DIAPH2-AS1Q14236 149 aa12.5□□□□□ -0.41
PDGFB-202ENST00000381551 CDK10Q15131 360 aa12.5□□□□□ -0.41
PDGFB-202ENST00000381551 PYDC2Q56P42 97 aa12.5□□□□□ -0.41
PDGFB-202ENST00000381551 TPTE2P1Q5T6R2 138 aa12.5□□□□□ -0.41
PDGFB-202ENST00000381551 DHRS11Q6UWP2 260 aa12.5□□□□□ -0.41
PDGFB-202ENST00000381551 Q6YL49 198 aa12.5□□□□□ -0.41
PDGFB-202ENST00000381551 ODF3L1Q8IXM7 274 aa12.5□□□□□ -0.41
PDGFB-202ENST00000381551 LYG1Q8N1E2 194 aa12.5□□□□□ -0.41
PDGFB-202ENST00000381551 ZDHHC16Q969W1 377 aa12.5□□□□□ -0.41
PDGFB-202ENST00000381551 THAP7Q9BT49 309 aaPredicted RBP12.5□□□□□ -0.41
PDGFB-202ENST00000381551 IFI27L2Q9H2X8 130 aa12.5□□□□□ -0.41
PDGFB-202ENST00000381551 GHITMQ9H3K2 345 aa12.5□□□□□ -0.41
PDGFB-202ENST00000381551 ZNF736B4DX44 427 aaPredicted RBP12.49□□□□□ -0.41
PDGFB-202ENST00000381551 LANCL1O43813 399 aa12.49□□□□□ -0.41
PDGFB-202ENST00000381551 TUSC2O75896 110 aa12.49□□□□□ -0.41
PDGFB-202ENST00000381551 OR8U9P0C7N5 309 aa12.49□□□□□ -0.41
PDGFB-202ENST00000381551 FCGR2CP31995 323 aa12.49□□□□□ -0.41
PDGFB-202ENST00000381551 HRH1P35367 487 aa12.49□□□□□ -0.41
PDGFB-202ENST00000381551 RAB7AP51149 207 aa12.49□□□□□ -0.41
PDGFB-202ENST00000381551 ZNF137PP52743 207 aa12.49□□□□□ -0.41
PDGFB-202ENST00000381551 ZNF45Q02386 682 aa12.49□□□□□ -0.41
PDGFB-202ENST00000381551 DYRK1AQ13627 763 aa12.49□□□□□ -0.41
PDGFB-202ENST00000381551 RBMS3Q6XE24 437 aaKnown RBP12.49□□□□□ -0.41
PDGFB-202ENST00000381551 Q8N402 240 aa12.49□□□□□ -0.41
PDGFB-202ENST00000381551 TMEM229BQ8NBD8 167 aa12.49□□□□□ -0.41
PDGFB-202ENST00000381551 OR5H2Q8NGV7 314 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms