RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 OR10J5Q8NHC4 309 aa10.28□□□□□ -0.76
SMN1-202ENST00000380707 CT45A3Q8NHU0 189 aa10.28□□□□□ -0.76
SMN1-202ENST00000380707 ZNF596Q8TC21 504 aa10.28□□□□□ -0.76
SMN1-202ENST00000380707 SMIM4Q8WVI0 70 aa10.28□□□□□ -0.76
SMN1-202ENST00000380707 YPEL2Q96QA6 119 aa10.28□□□□□ -0.76
SMN1-202ENST00000380707 MMP28Q9H239 520 aa10.28□□□□□ -0.76
SMN1-202ENST00000380707 JMJD1CQ15652 2540 aa10.27□□□□□ -0.77
SMN1-202ENST00000380707 BUB1B-PAK6H3BSN5 160 aa10.27□□□□□ -0.77
SMN1-202ENST00000380707 DIRAS3O95661 229 aa10.27□□□□□ -0.77
SMN1-202ENST00000380707 HLA-DMAP28067 261 aa10.27□□□□□ -0.77
SMN1-202ENST00000380707 ARPC4P59998 168 aa10.27□□□□□ -0.77
SMN1-202ENST00000380707 MRPS10P82664 201 aaKnown RBP10.27□□□□□ -0.77
SMN1-202ENST00000380707 HLA-DRB5Q30154 266 aa10.27□□□□□ -0.77
SMN1-202ENST00000380707 Q3ZCU0 254 aa10.27□□□□□ -0.77
SMN1-202ENST00000380707 LY6G6FQ5SQ64 297 aa10.27□□□□□ -0.77
SMN1-202ENST00000380707 SLC25A48Q6ZT89 311 aaKnown RBP10.27□□□□□ -0.77
SMN1-202ENST00000380707 DYNAPQ8N1N2 210 aa10.27□□□□□ -0.77
SMN1-202ENST00000380707 LINC00311Q8N616 119 aa10.27□□□□□ -0.77
SMN1-202ENST00000380707 OR5AP2Q8NGF4 316 aa10.27□□□□□ -0.77
SMN1-202ENST00000380707 SLC6A7Q99884 636 aa10.27□□□□□ -0.77
SMN1-202ENST00000380707 RDH8Q9NYR8 311 aa10.27□□□□□ -0.77
SMN1-202ENST00000380707 MTFP1Q9UDX5 166 aa10.27□□□□□ -0.77
SMN1-202ENST00000380707 MDFIC2A0A1B0GVS7 189 aa10.26□□□□□ -0.77
SMN1-202ENST00000380707 LY6LH3BQJ8 138 aa10.26□□□□□ -0.77
SMN1-202ENST00000380707 LANCL1O43813 399 aa10.26□□□□□ -0.77
SMN1-202ENST00000380707 RBBP9O75884 186 aa10.26□□□□□ -0.77
SMN1-202ENST00000380707 RGS11O94810 467 aa10.26□□□□□ -0.77
SMN1-202ENST00000380707 CTXN2P0C2S0 81 aa10.26□□□□□ -0.77
SMN1-202ENST00000380707 FAM157CP0CG43 387 aa10.26□□□□□ -0.77
SMN1-202ENST00000380707 PTBP1P26599 531 aaKnown RBP eCLIP10.26□□□□□ -0.77
SMN1-202ENST00000380707 HTR1DP28221 377 aa10.26□□□□□ -0.77
SMN1-202ENST00000380707 RCVRNP35243 200 aa10.26□□□□□ -0.77
SMN1-202ENST00000380707 RFX2P48378 723 aa10.26□□□□□ -0.77
SMN1-202ENST00000380707 TUSC1Q2TAM9 212 aa10.26□□□□□ -0.77
SMN1-202ENST00000380707 DEFB112Q30KQ8 113 aa10.26□□□□□ -0.77
SMN1-202ENST00000380707 PYDC2Q56P42 97 aa10.26□□□□□ -0.77
SMN1-202ENST00000380707 OR2AK2Q8NG84 335 aa10.26□□□□□ -0.77
SMN1-202ENST00000380707 OR10X1Q8NGY0 326 aa10.26□□□□□ -0.77
SMN1-202ENST00000380707 ZNF48Q96MX3 618 aaPredicted RBP10.26□□□□□ -0.77
SMN1-202ENST00000380707 GINS4Q9BRT9 223 aa10.26□□□□□ -0.77
SMN1-202ENST00000380707 AGMATQ9BSE5 352 aa10.26□□□□□ -0.77
SMN1-202ENST00000380707 ABHD14AQ9BUJ0 271 aa10.26□□□□□ -0.77
SMN1-202ENST00000380707 TOLLIPQ9H0E2 274 aa10.26□□□□□ -0.77
SMN1-202ENST00000380707 C11orf54Q9H0W9 315 aaPredicted RBP10.26□□□□□ -0.77
SMN1-202ENST00000380707 RBMX2Q9Y388 322 aaKnown RBP10.26□□□□□ -0.77
SMN1-202ENST00000380707 TBL2Q9Y4P3 447 aaKnown RBP10.26□□□□□ -0.77
SMN1-202ENST00000380707 ST8SIA5O15466 376 aa10.25□□□□□ -0.77
SMN1-202ENST00000380707 GSTZ1O43708 216 aaPredicted RBP10.25□□□□□ -0.77
SMN1-202ENST00000380707 PMP2P02689 132 aa10.25□□□□□ -0.77
SMN1-202ENST00000380707 NFYAP23511 347 aaPredicted RBP10.25□□□□□ -0.77
SMN1-202ENST00000380707 HRH1P35367 487 aa10.25□□□□□ -0.77
SMN1-202ENST00000380707 ACTBP60709 375 aa10.25□□□□□ -0.77
SMN1-202ENST00000380707 ACTG1P63261 375 aa10.25□□□□□ -0.77
SMN1-202ENST00000380707 DIAPH2-AS1Q14236 149 aa10.25□□□□□ -0.77
SMN1-202ENST00000380707 SSX2Q16385 188 aa10.25□□□□□ -0.77
SMN1-202ENST00000380707 MINOS1Q5TGZ0 78 aa10.25□□□□□ -0.77
SMN1-202ENST00000380707 LINC00299Q6ZSB3 139 aa10.25□□□□□ -0.77
SMN1-202ENST00000380707 OVCH2Q7RTZ1 564 aa10.25□□□□□ -0.77
SMN1-202ENST00000380707 H1FOOQ8IZA3 346 aaPredicted RBP10.25□□□□□ -0.77
SMN1-202ENST00000380707 Q8N402 240 aa10.25□□□□□ -0.77
SMN1-202ENST00000380707 MFSD4AQ8N468 514 aa10.25□□□□□ -0.77
SMN1-202ENST00000380707 NECAP2Q9NVZ3 263 aa10.25□□□□□ -0.77
SMN1-202ENST00000380707 DPM3Q9P2X0 92 aa10.25□□□□□ -0.77
SMN1-202ENST00000380707 FAM96BQ9Y3D0 163 aa10.25□□□□□ -0.77
SMN1-202ENST00000380707 HILPDAQ9Y5L2 63 aa10.25□□□□□ -0.77
SMN1-202ENST00000380707 MINOS1-NBL1R4GNA1 71 aa10.25□□□□□ -0.77
SMN1-202ENST00000380707 LEUTXA8MZ59 168 aa10.24□□□□□ -0.77
SMN1-202ENST00000380707 OR5H8P0DN80 308 aa10.24□□□□□ -0.77
SMN1-202ENST00000380707 TAS2R46P59540 309 aa10.24□□□□□ -0.77
SMN1-202ENST00000380707 SCGB2A2Q13296 93 aa10.24□□□□□ -0.77
SMN1-202ENST00000380707 CDK10Q15131 360 aa10.24□□□□□ -0.77
SMN1-202ENST00000380707 LDLRAD3Q86YD5 345 aa10.24□□□□□ -0.77
SMN1-202ENST00000380707 ODF3L1Q8IXM7 274 aa10.24□□□□□ -0.77
SMN1-202ENST00000380707 SIGLECL1Q8N7X8 197 aa10.24□□□□□ -0.77
SMN1-202ENST00000380707 EDARADDQ8WWZ3 215 aa10.24□□□□□ -0.77
SMN1-202ENST00000380707 MALSU1Q96EH3 234 aa10.24□□□□□ -0.77
SMN1-202ENST00000380707 THAP7Q9BT49 309 aaPredicted RBP10.24□□□□□ -0.77
SMN1-202ENST00000380707 SRRQ9GZT4 340 aa10.24□□□□□ -0.77
SMN1-202ENST00000380707 IFI27L2Q9H2X8 130 aa10.24□□□□□ -0.77
SMN1-202ENST00000380707 AKIP1Q9NQ31 210 aa10.24□□□□□ -0.77
SMN1-202ENST00000380707 RNF150Q9ULK6 438 aa10.24□□□□□ -0.77
SMN1-202ENST00000380707 ZNF736B4DX44 427 aaPredicted RBP10.23□□□□□ -0.77
SMN1-202ENST00000380707 ITGB1BP1O14713 200 aa10.23□□□□□ -0.77
SMN1-202ENST00000380707 CD3DP04234 171 aa10.23□□□□□ -0.77
SMN1-202ENST00000380707 FBP1P09467 338 aa10.23□□□□□ -0.77
SMN1-202ENST00000380707 OR3A3P47888 321 aa10.23□□□□□ -0.77
SMN1-202ENST00000380707 ZNF45Q02386 682 aa10.23□□□□□ -0.77
SMN1-202ENST00000380707 SSBP1Q04837 148 aaKnown RBP10.23□□□□□ -0.77
SMN1-202ENST00000380707 TPTE2P1Q5T6R2 138 aa10.23□□□□□ -0.77
SMN1-202ENST00000380707 LYG1Q8N1E2 194 aa10.23□□□□□ -0.77
SMN1-202ENST00000380707 OR5H2Q8NGV7 314 aa10.23□□□□□ -0.77
SMN1-202ENST00000380707 ST6GALNAC6Q969X2 333 aa10.23□□□□□ -0.77
SMN1-202ENST00000380707 CREB3L1Q96BA8 519 aa10.23□□□□□ -0.77
SMN1-202ENST00000380707 ABHD14BQ96IU4 210 aa10.23□□□□□ -0.77
SMN1-202ENST00000380707 SDHCQ99643 169 aaPredicted RBP10.23□□□□□ -0.77
SMN1-202ENST00000380707 PRDM13Q9H4Q3 707 aa10.23□□□□□ -0.77
SMN1-202ENST00000380707 EHFQ9NZC4 300 aa10.23□□□□□ -0.77
SMN1-202ENST00000380707 AMMECR1Q9Y4X0 333 aaPredicted RBP10.23□□□□□ -0.77
SMN1-202ENST00000380707 J3QRK9 145 aa10.23□□□□□ -0.77
SMN1-202ENST00000380707 M0QYG6 137 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms