RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 CLLU1Q5K131 121 aa12.27□□□□□ -0.44
TRIM13-202ENST00000378182 BCORQ6W2J9 1755 aa12.27□□□□□ -0.44
TRIM13-202ENST00000378182 FBLL1A6NHQ2 334 aaKnown RBP12.27□□□□□ -0.45
TRIM13-202ENST00000378182 CORTO00230 105 aa12.27□□□□□ -0.45
TRIM13-202ENST00000378182 DLX6P56179 175 aa12.27□□□□□ -0.45
TRIM13-202ENST00000378182 PRB3Q04118 309 aaPredicted RBP12.27□□□□□ -0.45
TRIM13-202ENST00000378182 AANATQ16613 207 aa12.27□□□□□ -0.45
TRIM13-202ENST00000378182 C17orf47Q8NEP4 570 aa12.27□□□□□ -0.45
TRIM13-202ENST00000378182 OR10G8Q8NGN5 311 aa12.27□□□□□ -0.45
TRIM13-202ENST00000378182 SGMS2Q8NHU3 365 aa12.27□□□□□ -0.45
TRIM13-202ENST00000378182 SMIM18P0DKX4 95 aa12.27□□□□□ -0.45
TRIM13-202ENST00000378182 LEUTXA8MZ59 168 aa12.27□□□□□ -0.45
TRIM13-202ENST00000378182 GPX1P07203 203 aa12.26□□□□□ -0.45
TRIM13-202ENST00000378182 SUCLG1P53597 346 aaKnown RBP12.26□□□□□ -0.45
TRIM13-202ENST00000378182 TOLLIPQ9H0E2 274 aa12.26□□□□□ -0.45
TRIM13-202ENST00000378182 MRM2Q9UI43 246 aaKnown RBP12.26□□□□□ -0.45
TRIM13-202ENST00000378182 C9JCJ5 164 aa12.26□□□□□ -0.45
TRIM13-202ENST00000378182 OR4A47Q6IF82 309 aa12.26□□□□□ -0.45
TRIM13-202ENST00000378182 C1orf174Q8IYL3 243 aa12.26□□□□□ -0.45
TRIM13-202ENST00000378182 C12orf57Q99622 126 aa12.26□□□□□ -0.45
TRIM13-202ENST00000378182 PLPP2O43688 288 aa12.26□□□□□ -0.45
TRIM13-202ENST00000378182 GLI3P10071 1580 aa12.26□□□□□ -0.45
TRIM13-202ENST00000378182 NKX2-6A6NCS4 301 aa12.26□□□□□ -0.45
TRIM13-202ENST00000378182 RPL27AP46776 148 aaKnown RBP12.26□□□□□ -0.45
TRIM13-202ENST00000378182 SLC22A18ASQ8N1D0 253 aa12.26□□□□□ -0.45
TRIM13-202ENST00000378182 HSF4Q9ULV5 492 aa12.26□□□□□ -0.45
TRIM13-202ENST00000378182 PPYP01298 95 aa12.26□□□□□ -0.45
TRIM13-202ENST00000378182 GP1BAP07359 652 aa12.26□□□□□ -0.45
TRIM13-202ENST00000378182 TMEM33P57088 247 aa12.26□□□□□ -0.45
TRIM13-202ENST00000378182 CX3CL1P78423 397 aa12.26□□□□□ -0.45
TRIM13-202ENST00000378182 KLF9Q13886 244 aaPredicted RBP12.26□□□□□ -0.45
TRIM13-202ENST00000378182 ACSF3Q4G176 576 aaPredicted RBP12.26□□□□□ -0.45
TRIM13-202ENST00000378182 C12orf73Q69YU5 71 aa12.26□□□□□ -0.45
TRIM13-202ENST00000378182 WDR73Q6P4I2 378 aa12.26□□□□□ -0.45
TRIM13-202ENST00000378182 SHANK3Q9BYB0 1731 aa12.26□□□□□ -0.45
TRIM13-202ENST00000378182 ZNF815PA8K554 130 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 PRR33A8MZF0 331 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 H3BTX0 84 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 ZNF253O75346 499 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 HYPMO75409 117 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 INHBBP09529 407 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 LY6DQ14210 128 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 PEAR1Q5VY43 1037 aaPredicted RBP12.25□□□□□ -0.45
TRIM13-202ENST00000378182 PRSS27Q9BQR3 290 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 CXorf1O96002 111 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 FAM214BQ7L5A3 538 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 RGP1Q92546 391 aaPredicted RBP12.25□□□□□ -0.45
TRIM13-202ENST00000378182 SLC35B3Q9H1N7 401 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 HEATR5BQ9P2D3 2071 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 RBFOX3A6NFN3 312 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 HBZP02008 142 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 LSM6P62312 80 aaKnown RBP12.25□□□□□ -0.45
TRIM13-202ENST00000378182 PCSK4Q6UW60 755 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 AHRRA9YTQ3 701 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 RPL34P49207 117 aaKnown RBP12.25□□□□□ -0.45
TRIM13-202ENST00000378182 TMEM50BP56557 158 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 CARFQ8N187 725 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 MIOXQ9UGB7 285 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 EXOGQ9Y2C4 368 aaKnown RBP12.25□□□□□ -0.45
TRIM13-202ENST00000378182 UBE2DNLQ8IWF7 75 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 TCTEX1D1Q8N7M0 179 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 ZNF721Q8TF20 911 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 ASB13Q8WXK3 278 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 J3QT63 122 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 ZIC1Q15915 447 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 OR2W1Q9Y3N9 320 aa12.25□□□□□ -0.45
TRIM13-202ENST00000378182 HIST1H1BP16401 226 aaKnown RBP12.24□□□□□ -0.45
TRIM13-202ENST00000378182 ELOBQ15370 118 aa12.24□□□□□ -0.45
TRIM13-202ENST00000378182 PITPNC1Q9UKF7 332 aa12.24□□□□□ -0.45
TRIM13-202ENST00000378182 SLC25A17O43808 307 aa12.24□□□□□ -0.45
TRIM13-202ENST00000378182 LTBRP36941 435 aa12.24□□□□□ -0.45
TRIM13-202ENST00000378182 STARD6P59095 220 aa12.24□□□□□ -0.45
TRIM13-202ENST00000378182 PNKDQ8N490 385 aa12.24□□□□□ -0.45
TRIM13-202ENST00000378182 PGLYRP4Q96LB8 373 aa12.24□□□□□ -0.45
TRIM13-202ENST00000378182 PGLYRP3Q96LB9 341 aa12.24□□□□□ -0.45
TRIM13-202ENST00000378182 LYZL2Q7Z4W2 148 aa12.24□□□□□ -0.45
TRIM13-202ENST00000378182 VKORC1L1Q8N0U8 176 aa12.24□□□□□ -0.45
TRIM13-202ENST00000378182 NFAM1Q8NET5 270 aaPredicted RBP12.24□□□□□ -0.45
TRIM13-202ENST00000378182 ADAT3Q96EY9 351 aaPredicted RBP12.24□□□□□ -0.45
TRIM13-202ENST00000378182 DUSP21Q9H596 190 aa12.24□□□□□ -0.45
TRIM13-202ENST00000378182 AP4M1O00189 453 aa12.24□□□□□ -0.45
TRIM13-202ENST00000378182 SNRPD3P62318 126 aaKnown RBP12.24□□□□□ -0.45
TRIM13-202ENST00000378182 C1orf162Q8NEQ5 155 aaPredicted RBP12.24□□□□□ -0.45
TRIM13-202ENST00000378182 SPTBP11277 2137 aa12.24□□□□□ -0.45
TRIM13-202ENST00000378182 IGHV1-69-2A0A0G2JMI3 117 aa12.24□□□□□ -0.45
TRIM13-202ENST00000378182 ZIC3O60481 467 aa12.24□□□□□ -0.45
TRIM13-202ENST00000378182 NDUFB6O95139 128 aa12.24□□□□□ -0.45
TRIM13-202ENST00000378182 MPC2O95563 127 aa12.24□□□□□ -0.45
TRIM13-202ENST00000378182 IGHV4-34P06331 123 aa12.24□□□□□ -0.45
TRIM13-202ENST00000378182 ELOVL1Q9BW60 279 aa12.24□□□□□ -0.45
TRIM13-202ENST00000378182 FOXJ2Q9P0K8 574 aa12.24□□□□□ -0.45
TRIM13-202ENST00000378182 SLC35E3Q7Z769 313 aa12.23□□□□□ -0.45
TRIM13-202ENST00000378182 ZAR1Q86SH2 424 aa12.23□□□□□ -0.45
TRIM13-202ENST00000378182 ATG4DQ86TL0 474 aaPredicted RBP12.23□□□□□ -0.45
TRIM13-202ENST00000378182 ABHD12Q8N2K0 398 aa12.23□□□□□ -0.45
TRIM13-202ENST00000378182 ZNF680Q8NEM1 530 aa12.23□□□□□ -0.45
TRIM13-202ENST00000378182 WDR54Q9H977 334 aa12.23□□□□□ -0.45
TRIM13-202ENST00000378182 RCC2Q9P258 522 aaKnown RBP12.23□□□□□ -0.45
TRIM13-202ENST00000378182 NAT8Q9UHE5 227 aa12.23□□□□□ -0.45
TRIM13-202ENST00000378182 DTX4Q9Y2E6 619 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms