RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 ZNHIT1O43257 154 aa15.41■□□□□ 0.06
CLSTN1-202ENST00000377298 ARG1P05089 322 aa15.41■□□□□ 0.06
CLSTN1-202ENST00000377298 CELA3AP09093 270 aa15.41■□□□□ 0.06
CLSTN1-202ENST00000377298 REG1BP48304 166 aa15.41■□□□□ 0.06
CLSTN1-202ENST00000377298 ZNF658BQ4V348 819 aaPredicted RBP15.41■□□□□ 0.06
CLSTN1-202ENST00000377298 MANBALQ9NQG1 85 aa15.41■□□□□ 0.06
CLSTN1-202ENST00000377298 ZNF586Q9NXT0 402 aa15.41■□□□□ 0.06
CLSTN1-202ENST00000377298 ZNF708P17019 499 aa15.41■□□□□ 0.06
CLSTN1-202ENST00000377298 DLL3Q9NYJ7 618 aa15.41■□□□□ 0.06
CLSTN1-202ENST00000377298 SPTBP11277 2137 aa15.41■□□□□ 0.06
CLSTN1-202ENST00000377298 C7orf66A4D0T2 115 aa15.4■□□□□ 0.06
CLSTN1-202ENST00000377298 SIGLECL1Q8N7X8 197 aa15.4■□□□□ 0.06
CLSTN1-202ENST00000377298 RD3LP0DJH9 198 aa15.4■□□□□ 0.06
CLSTN1-202ENST00000377298 IFITM2Q01629 132 aa15.4■□□□□ 0.06
CLSTN1-202ENST00000377298 KCNMB1Q16558 191 aa15.4■□□□□ 0.06
CLSTN1-202ENST00000377298 IGSF11Q5DX21 431 aa15.4■□□□□ 0.06
CLSTN1-202ENST00000377298 LAIR2Q6ISS4 152 aa15.4■□□□□ 0.06
CLSTN1-202ENST00000377298 GUCD1Q96NT3 240 aa15.4■□□□□ 0.06
CLSTN1-202ENST00000377298 ELF5Q9UKW6 265 aaPredicted RBP15.4■□□□□ 0.06
CLSTN1-202ENST00000377298 ODAMA1E959 279 aa15.4■□□□□ 0.06
CLSTN1-202ENST00000377298 C9orf172C9J069 976 aa15.4■□□□□ 0.06
CLSTN1-202ENST00000377298 PIN1P1O15428 100 aa15.4■□□□□ 0.06
CLSTN1-202ENST00000377298 NRN1LQ496H8 165 aa15.4■□□□□ 0.06
CLSTN1-202ENST00000377298 ABHD17AQ96GS6 310 aa15.4■□□□□ 0.06
CLSTN1-202ENST00000377298 OR51B2Q9Y5P1 312 aa15.4■□□□□ 0.06
CLSTN1-202ENST00000377298 DYNLRB2Q8TF09 96 aa15.4■□□□□ 0.06
CLSTN1-202ENST00000377298 ASCL3Q9NQ33 180 aa15.4■□□□□ 0.06
CLSTN1-202ENST00000377298 CACNA1GO43497 2377 aa15.4■□□□□ 0.06
CLSTN1-202ENST00000377298 TRBV23-1A0A0A0MS06 115 aa15.4■□□□□ 0.06
CLSTN1-202ENST00000377298 CLDN34H7C241 214 aa15.4■□□□□ 0.06
CLSTN1-202ENST00000377298 SLC25A53Q5H9E4 307 aa15.4■□□□□ 0.06
CLSTN1-202ENST00000377298 RSRP1Q9BUV0 290 aa15.4■□□□□ 0.06
CLSTN1-202ENST00000377298 GVINP1Q7Z2Y8 2422 aa15.39■□□□□ 0.05
CLSTN1-202ENST00000377298 B9A039 149 aa15.39■□□□□ 0.05
CLSTN1-202ENST00000377298 SSX7Q7RTT5 188 aa15.39■□□□□ 0.05
CLSTN1-202ENST00000377298 SCNM1Q9BWG6 230 aa15.39■□□□□ 0.05
CLSTN1-202ENST00000377298 H0Y980 276 aa15.39■□□□□ 0.05
CLSTN1-202ENST00000377298 NTN3O00634 580 aaPredicted RBP15.39■□□□□ 0.05
CLSTN1-202ENST00000377298 ATP5J2P56134 94 aa15.39■□□□□ 0.05
CLSTN1-202ENST00000377298 MOGAT2Q3SYC2 334 aa15.39■□□□□ 0.05
CLSTN1-202ENST00000377298 FAM78BQ5VT40 261 aa15.39■□□□□ 0.05
CLSTN1-202ENST00000377298 C1orf162Q8NEQ5 155 aaPredicted RBP15.39■□□□□ 0.05
CLSTN1-202ENST00000377298 OR4D10Q8NGI6 311 aa15.39■□□□□ 0.05
CLSTN1-202ENST00000377298 CACNA1IQ9P0X4 2223 aa15.39■□□□□ 0.05
CLSTN1-202ENST00000377298 SCTP09683 121 aa15.39■□□□□ 0.05
CLSTN1-202ENST00000377298 STXBP6Q8NFX7 210 aa15.39■□□□□ 0.05
CLSTN1-202ENST00000377298 POM121Q96HA1 1249 aa15.39■□□□□ 0.05
CLSTN1-202ENST00000377298 MIOXQ9UGB7 285 aa15.39■□□□□ 0.05
CLSTN1-202ENST00000377298 RAMP1O60894 148 aa15.39■□□□□ 0.05
CLSTN1-202ENST00000377298 NAT2P11245 290 aa15.39■□□□□ 0.05
CLSTN1-202ENST00000377298 NAT1P18440 290 aa15.39■□□□□ 0.05
CLSTN1-202ENST00000377298 GLRXP35754 106 aa15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 SNRPEP62304 92 aaKnown RBP15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 RCC2Q9P258 522 aaKnown RBP15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 GATCO43716 136 aaKnown RBP15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 FGF8P55075 233 aaPredicted RBP15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 SMUG1Q53HV7 270 aa15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 TEPPQ6URK8 271 aa15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 CLEC9AQ6UXN8 241 aa15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 AQP3Q92482 292 aa15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 SLC25A38Q96DW6 304 aa15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 PIMREGQ9BSJ6 248 aa15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 PTGDSP41222 190 aa15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 UBE2V2Q15819 145 aa15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 TMEM30BQ3MIR4 351 aa15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 C4orf17Q53FE4 359 aa15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 NSUN5P2Q63ZY6 315 aa15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 LILRB1Q8NHL6 650 aaPredicted RBP15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 FAM57AQ8TBR7 257 aa15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 SSMEM1Q8WWF3 244 aa15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 TOLLIPQ9H0E2 274 aa15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 CALYQ9NYX4 217 aa15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 GOLT1BQ9Y3E0 138 aa15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 RBFOX3A6NFN3 312 aa15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 ZNF645Q8N7E2 425 aa15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 OR1L6Q8NGR2 347 aa15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 PERPQ96FX8 193 aa15.38■□□□□ 0.05
CLSTN1-202ENST00000377298 F5H697 171 aa15.37■□□□□ 0.05
CLSTN1-202ENST00000377298 Q96M66 194 aa15.37■□□□□ 0.05
CLSTN1-202ENST00000377298 IDI2-AS1Q9NZ38 188 aa15.37■□□□□ 0.05
CLSTN1-202ENST00000377298 MED19A0JLT2 244 aaPredicted RBP15.37■□□□□ 0.05
CLSTN1-202ENST00000377298 FAM106CPP0CH98 169 aa15.37■□□□□ 0.05
CLSTN1-202ENST00000377298 RPL27AP46776 148 aaKnown RBP15.37■□□□□ 0.05
CLSTN1-202ENST00000377298 ECSCRQ19T08 205 aa15.37■□□□□ 0.05
CLSTN1-202ENST00000377298 LINC00114Q6XXX2 140 aa15.37■□□□□ 0.05
CLSTN1-202ENST00000377298 TMEM18Q96B42 140 aa15.37■□□□□ 0.05
CLSTN1-202ENST00000377298 CD59P13987 128 aa15.37■□□□□ 0.05
CLSTN1-202ENST00000377298 B2MP61769 119 aa15.37■□□□□ 0.05
CLSTN1-202ENST00000377298 OR8I2Q8N0Y5 310 aa15.37■□□□□ 0.05
CLSTN1-202ENST00000377298 OR4X1Q8NH49 305 aa15.37■□□□□ 0.05
CLSTN1-202ENST00000377298 GPR132Q9UNW8 380 aa15.37■□□□□ 0.05
CLSTN1-202ENST00000377298 MUC15Q8N387 334 aa15.37■□□□□ 0.05
CLSTN1-202ENST00000377298 STPG2Q8N412 459 aa15.37■□□□□ 0.05
CLSTN1-202ENST00000377298 ABHD14BQ96IU4 210 aa15.37■□□□□ 0.05
CLSTN1-202ENST00000377298 GHITMQ9H3K2 345 aa15.37■□□□□ 0.05
CLSTN1-202ENST00000377298 NAGKQ9UJ70 344 aa15.37■□□□□ 0.05
CLSTN1-202ENST00000377298 PDCD11Q14690 1871 aaKnown RBP15.36■□□□□ 0.05
CLSTN1-202ENST00000377298 CYB5R3P00387 301 aaPredicted RBP15.36■□□□□ 0.05
CLSTN1-202ENST00000377298 FAM87AP0C7U9 286 aa15.36■□□□□ 0.05
CLSTN1-202ENST00000377298 OR4P4Q8NGL7 312 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms