RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 CATR1Q13166 79 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 MDP1Q86V88 176 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 TMEM105Q8N8V8 129 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 PACRGQ96M98 296 aaPredicted RBP12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 TWSG1Q9GZX9 223 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 ENY2Q9NPA8 101 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 ZDHHC8Q9ULC8 765 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 PQLC2LA1A4F0 135 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 SH2D1BO14796 132 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 FCGR3BO75015 233 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 PITX3O75364 302 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 FGF12P61328 243 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 IL24Q13007 206 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 OR1L1Q8NH94 360 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 DLL3Q9NYJ7 618 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 XKRY2A2RUG3 117 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 C5orf52A6NGY3 159 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 ST8SIA5O15466 376 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 MT-CO3P00414 261 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 SRP19P09132 144 aaKnown RBP12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 CFPP27918 469 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 CDPF1Q6NVV7 123 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 OR10G4Q8NGN3 311 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 OR10G9Q8NGN4 311 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 OR10G7Q8NGN6 311 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 SSMEM1Q8WWF3 244 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 TP53TG5Q9Y2B4 290 aa12.29□□□□□ -0.44
TNFRSF1B-201ENST00000376259 PMS2P11Q13670 270 aa12.28□□□□□ -0.44
TNFRSF1B-201ENST00000376259 KCNMB1Q16558 191 aa12.28□□□□□ -0.44
TNFRSF1B-201ENST00000376259 M1APQ8TC57 530 aa12.28□□□□□ -0.44
TNFRSF1B-201ENST00000376259 PCED1AQ9H1Q7 454 aa12.28□□□□□ -0.44
TNFRSF1B-201ENST00000376259 LIN7CQ9NUP9 197 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1B-201ENST00000376259 IL17BQ9UHF5 180 aa12.28□□□□□ -0.44
TNFRSF1B-201ENST00000376259 LRP5LA4QPB2 252 aa12.28□□□□□ -0.44
TNFRSF1B-201ENST00000376259 MDH2P40926 338 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1B-201ENST00000376259 MEOX1P50221 254 aa12.28□□□□□ -0.44
TNFRSF1B-201ENST00000376259 SLC25A53Q5H9E4 307 aa12.28□□□□□ -0.44
TNFRSF1B-201ENST00000376259 FAM78BQ5VT40 261 aa12.28□□□□□ -0.44
TNFRSF1B-201ENST00000376259 C20orf204Q6ZNR8 217 aa12.28□□□□□ -0.44
TNFRSF1B-201ENST00000376259 VKORC1L1Q8N0U8 176 aa12.28□□□□□ -0.44
TNFRSF1B-201ENST00000376259 GALMQ96C23 342 aa12.28□□□□□ -0.44
TNFRSF1B-201ENST00000376259 C10orf35Q96D05 121 aa12.28□□□□□ -0.44
TNFRSF1B-201ENST00000376259 RAB40CQ96S21 281 aa12.28□□□□□ -0.44
TNFRSF1B-201ENST00000376259 ATP23Q9Y6H3 246 aa12.28□□□□□ -0.44
TNFRSF1B-201ENST00000376259 INTS1Q8N201 2190 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1B-201ENST00000376259 PCNX2A6NKB5 2137 aa12.28□□□□□ -0.44
TNFRSF1B-201ENST00000376259 A0A087X0M5 115 aa12.27□□□□□ -0.44
TNFRSF1B-201ENST00000376259 A0A1B0GX30 115 aa12.27□□□□□ -0.44
TNFRSF1B-201ENST00000376259 K7N7A8 449 aa12.27□□□□□ -0.44
TNFRSF1B-201ENST00000376259 TNFSF15O95150 251 aa12.27□□□□□ -0.44
TNFRSF1B-201ENST00000376259 CD46P15529 392 aa12.27□□□□□ -0.44
TNFRSF1B-201ENST00000376259 CRYGSP22914 178 aa12.27□□□□□ -0.44
TNFRSF1B-201ENST00000376259 GALR1P47211 349 aa12.27□□□□□ -0.44
TNFRSF1B-201ENST00000376259 TMEM241Q24JQ0 296 aa12.27□□□□□ -0.44
TNFRSF1B-201ENST00000376259 BSXQ3C1V8 233 aa12.27□□□□□ -0.44
TNFRSF1B-201ENST00000376259 ZNF705AQ6ZN79 300 aaPredicted RBP12.27□□□□□ -0.44
TNFRSF1B-201ENST00000376259 OR2M7Q8NG81 312 aa12.27□□□□□ -0.44
TNFRSF1B-201ENST00000376259 C18orf12Q96KH6 178 aa12.27□□□□□ -0.44
TNFRSF1B-201ENST00000376259 PCGF1Q9BSM1 259 aa12.27□□□□□ -0.44
TNFRSF1B-201ENST00000376259 DCTN5Q9BTE1 182 aa12.27□□□□□ -0.44
TNFRSF1B-201ENST00000376259 RPH3ALQ9UNE2 315 aa12.27□□□□□ -0.44
TNFRSF1B-201ENST00000376259 CELA3BP08861 270 aa12.27□□□□□ -0.45
TNFRSF1B-201ENST00000376259 PPP1R32Q7Z5V6 425 aa12.27□□□□□ -0.45
TNFRSF1B-201ENST00000376259 OR4A16Q8NH70 328 aa12.27□□□□□ -0.45
TNFRSF1B-201ENST00000376259 GATAD1Q8WUU5 269 aa12.27□□□□□ -0.45
TNFRSF1B-201ENST00000376259 ZDHHC16Q969W1 377 aa12.27□□□□□ -0.45
TNFRSF1B-201ENST00000376259 FAM173AQ9BQD7 235 aa12.27□□□□□ -0.45
TNFRSF1B-201ENST00000376259 OR51M1Q9H341 326 aa12.27□□□□□ -0.45
TNFRSF1B-201ENST00000376259 TAAR3PQ9P1P4 343 aa12.27□□□□□ -0.45
TNFRSF1B-201ENST00000376259 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.27□□□□□ -0.45
TNFRSF1B-201ENST00000376259 RRP8O43159 456 aaKnown RBP12.27□□□□□ -0.45
TNFRSF1B-201ENST00000376259 ARR3P36575 388 aa12.27□□□□□ -0.45
TNFRSF1B-201ENST00000376259 CEACAM21Q3KPI0 293 aa12.27□□□□□ -0.45
TNFRSF1B-201ENST00000376259 HES3Q5TGS1 186 aa12.27□□□□□ -0.45
TNFRSF1B-201ENST00000376259 TMEM251Q8N6I4 163 aa12.27□□□□□ -0.45
TNFRSF1B-201ENST00000376259 FAM103A1Q9BTL3 118 aaKnown RBP12.27□□□□□ -0.45
TNFRSF1B-201ENST00000376259 SAMD10Q9BYL1 202 aa12.27□□□□□ -0.45
TNFRSF1B-201ENST00000376259 OR51I2Q9H344 312 aa12.27□□□□□ -0.45
TNFRSF1B-201ENST00000376259 FOXD3Q9UJU5 478 aaPredicted RBP12.27□□□□□ -0.45
TNFRSF1B-201ENST00000376259 ASPMQ8IZT6 3477 aa12.27□□□□□ -0.45
TNFRSF1B-201ENST00000376259 ZNF716A6NP11 495 aa12.26□□□□□ -0.45
TNFRSF1B-201ENST00000376259 OR2H2O95918 312 aa12.26□□□□□ -0.45
TNFRSF1B-201ENST00000376259 BCL2P10415 239 aa12.26□□□□□ -0.45
TNFRSF1B-201ENST00000376259 ERVK-16P61578 105 aa12.26□□□□□ -0.45
TNFRSF1B-201ENST00000376259 TIPARPQ7Z3E1 657 aaKnown RBP12.26□□□□□ -0.45
TNFRSF1B-201ENST00000376259 FGFRL1Q8N441 504 aa12.26□□□□□ -0.45
TNFRSF1B-201ENST00000376259 LEAP2Q969E1 77 aa12.26□□□□□ -0.45
TNFRSF1B-201ENST00000376259 TUBG2Q9NRH3 451 aa12.26□□□□□ -0.45
TNFRSF1B-201ENST00000376259 ZMAT5Q9UDW3 170 aaKnown RBP12.26□□□□□ -0.45
TNFRSF1B-201ENST00000376259 SLC35B1P78383 322 aa12.26□□□□□ -0.45
TNFRSF1B-201ENST00000376259 C16orf82Q7Z2V1 217 aa12.26□□□□□ -0.45
TNFRSF1B-201ENST00000376259 MRPL30Q8TCC3 161 aaKnown RBP12.26□□□□□ -0.45
TNFRSF1B-201ENST00000376259 RCC1LQ96I51 464 aaKnown RBP12.26□□□□□ -0.45
TNFRSF1B-201ENST00000376259 PLEKHA3Q9HB20 300 aa12.26□□□□□ -0.45
TNFRSF1B-201ENST00000376259 TRAV38-1A0A0B4J264 116 aa12.26□□□□□ -0.45
TNFRSF1B-201ENST00000376259 BTBD17A6NE02 478 aa12.26□□□□□ -0.45
TNFRSF1B-201ENST00000376259 FGF5P12034 268 aa12.26□□□□□ -0.45
TNFRSF1B-201ENST00000376259 PMS2CLQ68D20 193 aa12.26□□□□□ -0.45
TNFRSF1B-201ENST00000376259 Q6ZRM9 215 aa12.26□□□□□ -0.45
TNFRSF1B-201ENST00000376259 SLC25A40Q8TBP6 338 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms